RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 SARGQ9BW04 601 aa12.38□□□□□ -0.43
GPC6-201ENST00000377047 SPNS1Q9H2V7 528 aa12.38□□□□□ -0.43
GPC6-201ENST00000377047 FAM96BQ9Y3D0 163 aa12.38□□□□□ -0.43
GPC6-201ENST00000377047 PAPPAQ13219 1627 aa12.38□□□□□ -0.43
GPC6-201ENST00000377047 PRSS37A4D1T9 235 aa12.38□□□□□ -0.43
GPC6-201ENST00000377047 RAB13P51153 203 aa12.38□□□□□ -0.43
GPC6-201ENST00000377047 CLDN22Q8N7P3 220 aa12.38□□□□□ -0.43
GPC6-201ENST00000377047 FAM173AQ9BQD7 235 aa12.38□□□□□ -0.43
GPC6-201ENST00000377047 CNTNAP3Q9BZ76 1288 aa12.38□□□□□ -0.43
GPC6-201ENST00000377047 SLCO1B1Q9Y6L6 691 aa12.38□□□□□ -0.43
GPC6-201ENST00000377047 TRAV17A0A0B4J275 112 aa12.38□□□□□ -0.43
GPC6-201ENST00000377047 TRDV1A0A1B0GX56 115 aa12.38□□□□□ -0.43
GPC6-201ENST00000377047 LRP5LA4QPB2 252 aa12.38□□□□□ -0.43
GPC6-201ENST00000377047 HSBP1L1C9JCN9 74 aa12.38□□□□□ -0.43
GPC6-201ENST00000377047 CLINT1Q14677 625 aa12.38□□□□□ -0.43
GPC6-201ENST00000377047 CDONQ4KMG0 1287 aa12.38□□□□□ -0.43
GPC6-201ENST00000377047 OTPQ5XKR4 325 aa12.38□□□□□ -0.43
GPC6-201ENST00000377047 ANKRD53Q8N9V6 530 aa12.38□□□□□ -0.43
GPC6-201ENST00000377047 HPSE2Q8WWQ2 592 aa12.38□□□□□ -0.43
GPC6-201ENST00000377047 GPR84Q9NQS5 396 aa12.38□□□□□ -0.43
GPC6-201ENST00000377047 FBXL4Q9UKA2 621 aa12.38□□□□□ -0.43
GPC6-201ENST00000377047 FBXL2Q9UKC9 423 aa12.38□□□□□ -0.43
GPC6-201ENST00000377047 ANKRD61A6NGH8 418 aa12.38□□□□□ -0.43
GPC6-201ENST00000377047 KLK8O60259 260 aa12.38□□□□□ -0.43
GPC6-201ENST00000377047 FOLR1P15328 257 aa12.38□□□□□ -0.43
GPC6-201ENST00000377047 ETV1P50549 477 aa12.38□□□□□ -0.43
GPC6-201ENST00000377047 IL11RAQ14626 422 aa12.38□□□□□ -0.43
GPC6-201ENST00000377047 PHYHIPQ92561 330 aa12.38□□□□□ -0.43
GPC6-201ENST00000377047 ZNF707Q96C28 371 aaPredicted RBP12.38□□□□□ -0.43
GPC6-201ENST00000377047 CMC2Q9NRP2 79 aa12.38□□□□□ -0.43
GPC6-201ENST00000377047 P4HTMQ9NXG6 502 aa12.38□□□□□ -0.43
GPC6-201ENST00000377047 A0A0A6YYD5 115 aa12.38□□□□□ -0.43
GPC6-201ENST00000377047 ANKUB1A6NFN9 424 aa12.38□□□□□ -0.43
GPC6-201ENST00000377047 WIPI1Q5MNZ9 446 aaPredicted RBP12.38□□□□□ -0.43
GPC6-201ENST00000377047 TFAP2EQ6VUC0 442 aa12.38□□□□□ -0.43
GPC6-201ENST00000377047 ZNF573Q86YE8 665 aa12.38□□□□□ -0.43
GPC6-201ENST00000377047 SIAH3Q8IW03 269 aa12.38□□□□□ -0.43
GPC6-201ENST00000377047 TECTBQ96PL2 329 aa12.38□□□□□ -0.43
GPC6-201ENST00000377047 SLC25A37Q9NYZ2 338 aa12.38□□□□□ -0.43
GPC6-201ENST00000377047 PPP1R3CQ9UQK1 317 aa12.38□□□□□ -0.43
GPC6-201ENST00000377047 B3GALT5Q9Y2C3 310 aa12.38□□□□□ -0.43
GPC6-201ENST00000377047 XRCC2O43543 280 aa12.37□□□□□ -0.43
GPC6-201ENST00000377047 RAC1P63000 192 aa12.37□□□□□ -0.43
GPC6-201ENST00000377047 OR1L3Q8NH93 324 aa12.37□□□□□ -0.43
GPC6-201ENST00000377047 SAT2Q96F10 170 aaPredicted RBP12.37□□□□□ -0.43
GPC6-201ENST00000377047 ATF6BQ99941 703 aa12.37□□□□□ -0.43
GPC6-201ENST00000377047 MEIKINA0A087WXM9 373 aa12.37□□□□□ -0.43
GPC6-201ENST00000377047 SHISA8B8ZZ34 492 aa12.37□□□□□ -0.43
GPC6-201ENST00000377047 CISD3P0C7P0 127 aa12.37□□□□□ -0.43
GPC6-201ENST00000377047 ECI1P42126 302 aa12.37□□□□□ -0.43
GPC6-201ENST00000377047 RAP2BP61225 183 aa12.37□□□□□ -0.43
GPC6-201ENST00000377047 SOWAHCQ53LP3 525 aaPredicted RBP12.37□□□□□ -0.43
GPC6-201ENST00000377047 KLHDC8BQ8IXV7 354 aa12.37□□□□□ -0.43
GPC6-201ENST00000377047 TTC9Q92623 222 aa12.37□□□□□ -0.43
GPC6-201ENST00000377047 TXNIPQ9H3M7 391 aa12.37□□□□□ -0.43
GPC6-201ENST00000377047 ZCCHC4Q9H5U6 513 aa12.37□□□□□ -0.43
GPC6-201ENST00000377047 KIR2DS1A0A191URI9 304 aa12.37□□□□□ -0.43
GPC6-201ENST00000377047 KIR2DS4P43632 304 aa12.37□□□□□ -0.43
GPC6-201ENST00000377047 KIR2DS1Q14954 304 aa12.37□□□□□ -0.43
GPC6-201ENST00000377047 SSX2Q16385 188 aa12.37□□□□□ -0.43
GPC6-201ENST00000377047 HES3Q5TGS1 186 aa12.37□□□□□ -0.43
GPC6-201ENST00000377047 RGS7BPQ6MZT1 257 aaPredicted RBP12.37□□□□□ -0.43
GPC6-201ENST00000377047 ACSM5Q6NUN0 579 aa12.37□□□□□ -0.43
GPC6-201ENST00000377047 OR2A14Q96R47 310 aa12.37□□□□□ -0.43
GPC6-201ENST00000377047 NKX6-1P78426 367 aaPredicted RBP12.37□□□□□ -0.43
GPC6-201ENST00000377047 MDGA2Q7Z553 956 aa12.37□□□□□ -0.43
GPC6-201ENST00000377047 RDH5Q92781 318 aa12.37□□□□□ -0.43
GPC6-201ENST00000377047 PKMYT1Q99640 499 aa12.37□□□□□ -0.43
GPC6-201ENST00000377047 SLCO5A1Q9H2Y9 848 aa12.37□□□□□ -0.43
GPC6-201ENST00000377047 HINT3Q9NQE9 182 aaKnown RBP12.37□□□□□ -0.43
GPC6-201ENST00000377047 HDGFL3Q9Y3E1 203 aa12.37□□□□□ -0.43
GPC6-201ENST00000377047 IGHV5-51A0A0C4DH38 117 aa12.37□□□□□ -0.43
GPC6-201ENST00000377047 C1orf196B1AJZ1 125 aa12.37□□□□□ -0.43
GPC6-201ENST00000377047 SSX4O60224 188 aa12.37□□□□□ -0.43
GPC6-201ENST00000377047 PLXDC2Q6UX71 529 aa12.37□□□□□ -0.43
GPC6-201ENST00000377047 IL34Q6ZMJ4 242 aa12.37□□□□□ -0.43
GPC6-201ENST00000377047 VASH2Q86V25 355 aa12.37□□□□□ -0.43
GPC6-201ENST00000377047 FBXO17Q96EF6 278 aa12.37□□□□□ -0.43
GPC6-201ENST00000377047 CNRIP1Q96F85 164 aaPredicted RBP12.37□□□□□ -0.43
GPC6-201ENST00000377047 TINAGL1Q9GZM7 467 aaPredicted RBP12.37□□□□□ -0.43
GPC6-201ENST00000377047 FITM1A5D6W6 292 aa12.36□□□□□ -0.43
GPC6-201ENST00000377047 BHLHE40O14503 412 aa12.36□□□□□ -0.43
GPC6-201ENST00000377047 MEOX1P50221 254 aa12.36□□□□□ -0.43
GPC6-201ENST00000377047 SHBQ15464 509 aa12.36□□□□□ -0.43
GPC6-201ENST00000377047 PRAMEF5Q5TYX0 476 aa12.36□□□□□ -0.43
GPC6-201ENST00000377047 PRAMEF6Q5VXH4 476 aa12.36□□□□□ -0.43
GPC6-201ENST00000377047 SSX9Q7RTT3 188 aa12.36□□□□□ -0.43
GPC6-201ENST00000377047 PRSS45Q7RTY3 260 aa12.36□□□□□ -0.43
GPC6-201ENST00000377047 ZDHHC23Q8IYP9 409 aa12.36□□□□□ -0.43
GPC6-201ENST00000377047 NANOGP1Q8N7R0 232 aa12.36□□□□□ -0.43
GPC6-201ENST00000377047 FAM213BQ8TBF2 198 aa12.36□□□□□ -0.43
GPC6-201ENST00000377047 SPACA1Q9HBV2 294 aa12.36□□□□□ -0.43
GPC6-201ENST00000377047 FAM90A27PA6NNH2 459 aa12.36□□□□□ -0.43
GPC6-201ENST00000377047 I6L893 689 aaPredicted RBP12.36□□□□□ -0.43
GPC6-201ENST00000377047 FADS1O60427 444 aa12.36□□□□□ -0.43
GPC6-201ENST00000377047 APEX1P27695 318 aaKnown RBP12.36□□□□□ -0.43
GPC6-201ENST00000377047 SPATA46Q5T0L3 261 aa12.36□□□□□ -0.43
GPC6-201ENST00000377047 FJX1Q86VR8 437 aa12.36□□□□□ -0.43
GPC6-201ENST00000377047 PSD2Q9BQI7 771 aa12.36□□□□□ -0.43
GPC6-201ENST00000377047 SLC39A9Q9NUM3 307 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms