RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 CLDN22Q8N7P3 220 aa12.47□□□□□ -0.41
HDAC6-204ENST00000376643 FAM162AQ96A26 154 aa12.47□□□□□ -0.41
HDAC6-204ENST00000376643 HAVCR1Q96D42 359 aa12.47□□□□□ -0.41
HDAC6-204ENST00000376643 HSH2DQ96JZ2 352 aa12.47□□□□□ -0.41
HDAC6-204ENST00000376643 GPX7Q96SL4 187 aaPredicted RBP12.47□□□□□ -0.41
HDAC6-204ENST00000376643 SLC6A7Q99884 636 aa12.47□□□□□ -0.41
HDAC6-204ENST00000376643 PLA2G12AQ9BZM1 189 aa12.47□□□□□ -0.41
HDAC6-204ENST00000376643 NMNAT1Q9HAN9 279 aaPredicted RBP12.47□□□□□ -0.41
HDAC6-204ENST00000376643 PATZ1Q9HBE1 687 aaKnown RBP12.47□□□□□ -0.41
HDAC6-204ENST00000376643 RHCGQ9UBD6 479 aa12.47□□□□□ -0.41
HDAC6-204ENST00000376643 IL20RAQ9UHF4 553 aa12.47□□□□□ -0.41
HDAC6-204ENST00000376643 LRCH1Q9Y2L9 728 aa12.47□□□□□ -0.41
HDAC6-204ENST00000376643 AUP1Q9Y679 476 aa12.47□□□□□ -0.41
HDAC6-204ENST00000376643 LRRC30A6NM36 301 aa12.46□□□□□ -0.41
HDAC6-204ENST00000376643 A8MXK9 166 aa12.46□□□□□ -0.41
HDAC6-204ENST00000376643 RGS9O75916 674 aaPredicted RBP12.46□□□□□ -0.41
HDAC6-204ENST00000376643 AVPP01185 164 aa12.46□□□□□ -0.41
HDAC6-204ENST00000376643 H1F0P07305 194 aaKnown RBP12.46□□□□□ -0.41
HDAC6-204ENST00000376643 SELEP16581 610 aa12.46□□□□□ -0.41
HDAC6-204ENST00000376643 GPR4P46093 362 aa12.46□□□□□ -0.41
HDAC6-204ENST00000376643 SRP9P49458 86 aaKnown RBP12.46□□□□□ -0.41
HDAC6-204ENST00000376643 SMIM11AP58511 58 aa12.46□□□□□ -0.41
HDAC6-204ENST00000376643 KRT72Q14CN4 511 aa12.46□□□□□ -0.41
HDAC6-204ENST00000376643 HSP90B2PQ58FF3 399 aa12.46□□□□□ -0.41
HDAC6-204ENST00000376643 BTNL3Q6UXE8 466 aa12.46□□□□□ -0.41
HDAC6-204ENST00000376643 HACD2Q6Y1H2 254 aa12.46□□□□□ -0.41
HDAC6-204ENST00000376643 FAM122BQ7Z309 247 aa12.46□□□□□ -0.41
HDAC6-204ENST00000376643 LRRC28Q86X40 367 aaPredicted RBP12.46□□□□□ -0.41
HDAC6-204ENST00000376643 SLC15A3Q8IY34 581 aa12.46□□□□□ -0.41
HDAC6-204ENST00000376643 C1orf87Q8N0U7 546 aa12.46□□□□□ -0.41
HDAC6-204ENST00000376643 GJC3Q8NFK1 279 aa12.46□□□□□ -0.41
HDAC6-204ENST00000376643 OR13G1Q8NGZ3 307 aa12.46□□□□□ -0.41
HDAC6-204ENST00000376643 OR1F12Q8NHA8 337 aa12.46□□□□□ -0.41
HDAC6-204ENST00000376643 APOBEC3DQ96AK3 386 aaPredicted RBP12.46□□□□□ -0.41
HDAC6-204ENST00000376643 CMBLQ96DG6 245 aa12.46□□□□□ -0.41
HDAC6-204ENST00000376643 PLEKHA8Q96JA3 519 aa12.46□□□□□ -0.41
HDAC6-204ENST00000376643 Q96M85 177 aa12.46□□□□□ -0.41
HDAC6-204ENST00000376643 KCTD14Q9BQ13 255 aaPredicted RBP12.46□□□□□ -0.41
HDAC6-204ENST00000376643 HDHD2Q9H0R4 259 aa12.46□□□□□ -0.41
HDAC6-204ENST00000376643 CCDC134Q9H6E4 229 aa12.46□□□□□ -0.41
HDAC6-204ENST00000376643 EMC7Q9NPA0 242 aa12.46□□□□□ -0.41
HDAC6-204ENST00000376643 CMTM6Q9NX76 183 aa12.46□□□□□ -0.41
HDAC6-204ENST00000376643 NUP50Q9UKX7 468 aa12.46□□□□□ -0.41
HDAC6-204ENST00000376643 SAMD4AQ9UPU9 718 aaKnown RBP12.46□□□□□ -0.41
HDAC6-204ENST00000376643 AURKCQ9UQB9 309 aa12.46□□□□□ -0.41
HDAC6-204ENST00000376643 ADAM18Q9Y3Q7 739 aa12.46□□□□□ -0.41
HDAC6-204ENST00000376643 ENPP4Q9Y6X5 453 aa12.46□□□□□ -0.41
HDAC6-204ENST00000376643 H7C1C5 153 aa12.45□□□□□ -0.42
HDAC6-204ENST00000376643 J3KTA2 159 aa12.45□□□□□ -0.42
HDAC6-204ENST00000376643 FFAR1O14842 300 aa12.45□□□□□ -0.42
HDAC6-204ENST00000376643 SLC16A7O60669 478 aa12.45□□□□□ -0.42
HDAC6-204ENST00000376643 SERPINA1P01009 418 aa12.45□□□□□ -0.42
HDAC6-204ENST00000376643 FSHBP01225 129 aa12.45□□□□□ -0.42
HDAC6-204ENST00000376643 RHCEP18577 417 aa12.45□□□□□ -0.42
HDAC6-204ENST00000376643 SLC7A2P52569 658 aa12.45□□□□□ -0.42
HDAC6-204ENST00000376643 LCN6P62502 163 aa12.45□□□□□ -0.42
HDAC6-204ENST00000376643 ZNF154Q13106 437 aa12.45□□□□□ -0.42
HDAC6-204ENST00000376643 FHL1Q13642 323 aa12.45□□□□□ -0.42
HDAC6-204ENST00000376643 MESTQ5EB52 335 aa12.45□□□□□ -0.42
HDAC6-204ENST00000376643 DPY19L2P2Q6ZN68 376 aa12.45□□□□□ -0.42
HDAC6-204ENST00000376643 ATG16L2Q8NAA4 619 aa12.45□□□□□ -0.42
HDAC6-204ENST00000376643 ZNF582Q96NG8 517 aaPredicted RBP12.45□□□□□ -0.42
HDAC6-204ENST00000376643 COQ7Q99807 217 aa12.45□□□□□ -0.42
HDAC6-204ENST00000376643 SYT4Q9H2B2 425 aa12.45□□□□□ -0.42
HDAC6-204ENST00000376643 NRIP3Q9NQ35 241 aa12.45□□□□□ -0.42
HDAC6-204ENST00000376643 VSX1Q9NZR4 365 aaPredicted RBP12.45□□□□□ -0.42
HDAC6-204ENST00000376643 ASH2LQ9UBL3 628 aa12.45□□□□□ -0.42
HDAC6-204ENST00000376643 OPN4Q9UHM6 478 aa12.45□□□□□ -0.42
HDAC6-204ENST00000376643 NOP16Q9Y3C1 178 aaKnown RBP12.45□□□□□ -0.42
HDAC6-204ENST00000376643 CDC42EP2O14613 210 aa12.44□□□□□ -0.42
HDAC6-204ENST00000376643 FSTL3O95633 263 aa12.44□□□□□ -0.42
HDAC6-204ENST00000376643 PPIAL4GP0DN37 164 aa12.44□□□□□ -0.42
HDAC6-204ENST00000376643 COX4I1P13073 169 aa12.44□□□□□ -0.42
HDAC6-204ENST00000376643 CTLA4P16410 223 aa12.44□□□□□ -0.42
HDAC6-204ENST00000376643 ZNF12P17014 697 aa12.44□□□□□ -0.42
HDAC6-204ENST00000376643 MTNR1AP48039 350 aa12.44□□□□□ -0.42
HDAC6-204ENST00000376643 SLC6A9P48067 706 aa12.44□□□□□ -0.42
HDAC6-204ENST00000376643 UBA52P62987 128 aaKnown RBP12.44□□□□□ -0.42
HDAC6-204ENST00000376643 KCNMB1Q16558 191 aa12.44□□□□□ -0.42
HDAC6-204ENST00000376643 FGD3Q5JSP0 725 aa12.44□□□□□ -0.42
HDAC6-204ENST00000376643 LRRN1Q6UXK5 716 aa12.44□□□□□ -0.42
HDAC6-204ENST00000376643 FBXW12Q6X9E4 464 aa12.44□□□□□ -0.42
HDAC6-204ENST00000376643 NLRC3Q7RTR2 1065 aa12.44□□□□□ -0.42
HDAC6-204ENST00000376643 ITLN1Q8WWA0 313 aa12.44□□□□□ -0.42
HDAC6-204ENST00000376643 CMTM5Q96DZ9 223 aa12.44□□□□□ -0.42
HDAC6-204ENST00000376643 RSRC1Q96IZ7 334 aaKnown RBP12.44□□□□□ -0.42
HDAC6-204ENST00000376643 OR2V2Q96R30 315 aa12.44□□□□□ -0.42
HDAC6-204ENST00000376643 HCAR1Q9BXC0 346 aa12.44□□□□□ -0.42
HDAC6-204ENST00000376643 RERGLQ9H628 205 aa12.44□□□□□ -0.42
HDAC6-204ENST00000376643 ARMCX1Q9P291 453 aa12.44□□□□□ -0.42
HDAC6-204ENST00000376643 EGFL7Q9UHF1 273 aa12.44□□□□□ -0.42
HDAC6-204ENST00000376643 SIGLEC7Q9Y286 467 aa12.44□□□□□ -0.42
HDAC6-204ENST00000376643 SNX13Q9Y5W8 968 aa12.44□□□□□ -0.42
HDAC6-204ENST00000376643 WNK2Q9Y3S1 2297 aa12.44□□□□□ -0.42
HDAC6-204ENST00000376643 TANC2Q9HCD6 1990 aa12.43□□□□□ -0.42
HDAC6-204ENST00000376643 IMPA2O14732 288 aa12.43□□□□□ -0.42
HDAC6-204ENST00000376643 TXNDC12O95881 172 aa12.43□□□□□ -0.42
HDAC6-204ENST00000376643 IRF2P14316 349 aa12.43□□□□□ -0.42
HDAC6-204ENST00000376643 IFNGR2P38484 337 aa12.43□□□□□ -0.42
HDAC6-204ENST00000376643 ECH1Q13011 328 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms