RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 SEC61A2Q9H9S3 476 aa9.8□□□□□ -0.84
PDPN-202ENST00000376057 ABRACLQ9P1F3 81 aa9.8□□□□□ -0.84
PDPN-202ENST00000376057 CLCF1Q9UBD9 225 aa9.8□□□□□ -0.84
PDPN-202ENST00000376057 OR52A1Q9UKL2 312 aa9.8□□□□□ -0.84
PDPN-202ENST00000376057 PSMD9O00233 223 aa9.79□□□□□ -0.84
PDPN-202ENST00000376057 SS18L1O75177 396 aaPredicted RBP9.79□□□□□ -0.84
PDPN-202ENST00000376057 MRPL33O75394 65 aaKnown RBP9.79□□□□□ -0.84
PDPN-202ENST00000376057 ITGB2P05107 769 aa9.79□□□□□ -0.84
PDPN-202ENST00000376057 CCL1P22362 96 aa9.79□□□□□ -0.84
PDPN-202ENST00000376057 THBS2P35442 1172 aa9.79□□□□□ -0.84
PDPN-202ENST00000376057 PCBD1P61457 104 aa9.79□□□□□ -0.84
PDPN-202ENST00000376057 SF3B4Q15427 424 aaKnown RBP eCLIP9.79□□□□□ -0.84
PDPN-202ENST00000376057 GUSBP1Q15486 140 aa9.79□□□□□ -0.84
PDPN-202ENST00000376057 KLHL24Q6TFL4 600 aa9.79□□□□□ -0.84
PDPN-202ENST00000376057 LINC00346Q8IVM7 164 aa9.79□□□□□ -0.84
PDPN-202ENST00000376057 ZNF676Q8N7Q3 588 aa9.79□□□□□ -0.84
PDPN-202ENST00000376057 SARAFQ96BY9 339 aa9.79□□□□□ -0.84
PDPN-202ENST00000376057 KCNJ15Q99712 375 aa9.79□□□□□ -0.84
PDPN-202ENST00000376057 CFAP54Q96N23 3096 aa9.79□□□□□ -0.84
PDPN-202ENST00000376057 TMEM269A0A1B0GVZ9 245 aa9.79□□□□□ -0.84
PDPN-202ENST00000376057 CNOT4O95628 575 aaKnown RBP9.79□□□□□ -0.84
PDPN-202ENST00000376057 WNT11O96014 354 aa9.79□□□□□ -0.84
PDPN-202ENST00000376057 IGLV3-1P01715 115 aa9.79□□□□□ -0.84
PDPN-202ENST00000376057 CDAP32320 146 aa9.79□□□□□ -0.84
PDPN-202ENST00000376057 TNFSF8P32971 234 aa9.79□□□□□ -0.84
PDPN-202ENST00000376057 MFGE8Q08431 387 aaPredicted RBP9.79□□□□□ -0.84
PDPN-202ENST00000376057 SFXN4Q6P4A7 337 aa9.79□□□□□ -0.84
PDPN-202ENST00000376057 ABHD12BQ7Z5M8 362 aaPredicted RBP9.79□□□□□ -0.84
PDPN-202ENST00000376057 NR2C2APQ86WQ0 139 aa9.79□□□□□ -0.84
PDPN-202ENST00000376057 GMPPAQ96IJ6 420 aaPredicted RBP9.79□□□□□ -0.84
PDPN-202ENST00000376057 SLC30A2Q9BRI3 323 aa9.79□□□□□ -0.84
PDPN-202ENST00000376057 CCDC32Q9BV29 185 aa9.79□□□□□ -0.84
PDPN-202ENST00000376057 SLITRK2Q9H156 845 aa9.79□□□□□ -0.84
PDPN-202ENST00000376057 CALHM2Q9HA72 323 aa9.79□□□□□ -0.84
PDPN-202ENST00000376057 EMC7Q9NPA0 242 aa9.79□□□□□ -0.84
PDPN-202ENST00000376057 NOX4Q9NPH5 578 aa9.79□□□□□ -0.84
PDPN-202ENST00000376057 ADAM30Q9UKF2 790 aa9.79□□□□□ -0.84
PDPN-202ENST00000376057 GVINP1Q7Z2Y8 2422 aa9.79□□□□□ -0.84
PDPN-202ENST00000376057 ZFHX2Q9C0A1 2572 aaPredicted RBP9.79□□□□□ -0.84
PDPN-202ENST00000376057 ISPDA4D126 451 aa9.78□□□□□ -0.84
PDPN-202ENST00000376057 AHRRA9YTQ3 701 aa9.78□□□□□ -0.84
PDPN-202ENST00000376057 MKRN2OSH3BPM6 223 aa9.78□□□□□ -0.84
PDPN-202ENST00000376057 DVL2O14641 736 aa9.78□□□□□ -0.84
PDPN-202ENST00000376057 TPPPO94811 219 aa9.78□□□□□ -0.84
PDPN-202ENST00000376057 CRYABP02511 175 aaKnown RBP9.78□□□□□ -0.84
PDPN-202ENST00000376057 ZNF12P17014 697 aa9.78□□□□□ -0.84
PDPN-202ENST00000376057 MXD1Q05195 221 aa9.78□□□□□ -0.84
PDPN-202ENST00000376057 RAB35Q15286 201 aa9.78□□□□□ -0.84
PDPN-202ENST00000376057 ZNF181Q2M3W8 571 aa9.78□□□□□ -0.84
PDPN-202ENST00000376057 CCDC92Q53HC0 331 aaPredicted RBP9.78□□□□□ -0.84
PDPN-202ENST00000376057 SPANXN2Q5MJ10 180 aa9.78□□□□□ -0.84
PDPN-202ENST00000376057 OR7E24Q6IFN5 339 aa9.78□□□□□ -0.84
PDPN-202ENST00000376057 PRSS45Q7RTY3 260 aa9.78□□□□□ -0.84
PDPN-202ENST00000376057 KCNS3Q9BQ31 491 aa9.78□□□□□ -0.84
PDPN-202ENST00000376057 HDHD2Q9H0R4 259 aa9.78□□□□□ -0.84
PDPN-202ENST00000376057 MIXL1Q9H2W2 232 aa9.78□□□□□ -0.84
PDPN-202ENST00000376057 EXO5Q9H790 373 aa9.78□□□□□ -0.84
PDPN-202ENST00000376057 CRLF2Q9HC73 371 aa9.78□□□□□ -0.84
PDPN-202ENST00000376057 ASH2LQ9UBL3 628 aa9.78□□□□□ -0.84
PDPN-202ENST00000376057 HHLA2Q9UM44 414 aa9.78□□□□□ -0.84
PDPN-202ENST00000376057 DMXL1Q9Y485 3027 aa9.78□□□□□ -0.84
PDPN-202ENST00000376057 CTDSP2O14595 271 aa9.78□□□□□ -0.84
PDPN-202ENST00000376057 OCM2P0CE71 109 aa9.78□□□□□ -0.84
PDPN-202ENST00000376057 EPXP11678 715 aa9.78□□□□□ -0.84
PDPN-202ENST00000376057 IGFBP3P17936 291 aaPredicted RBP9.78□□□□□ -0.84
PDPN-202ENST00000376057 RANBP1P43487 201 aa9.78□□□□□ -0.84
PDPN-202ENST00000376057 SCRN3Q0VDG4 424 aa9.78□□□□□ -0.84
PDPN-202ENST00000376057 ELFN2Q5R3F8 820 aa9.78□□□□□ -0.84
PDPN-202ENST00000376057 BCL2L15Q5TBC7 163 aa9.78□□□□□ -0.84
PDPN-202ENST00000376057 LINGO2Q7L985 606 aa9.78□□□□□ -0.84
PDPN-202ENST00000376057 LRRTM1Q86UE6 522 aa9.78□□□□□ -0.84
PDPN-202ENST00000376057 PARP16Q8N5Y8 322 aa9.78□□□□□ -0.84
PDPN-202ENST00000376057 RBMXL3Q8N7X1 1067 aaKnown RBP9.78□□□□□ -0.84
PDPN-202ENST00000376057 DRAXINQ8NBI3 349 aaPredicted RBP9.78□□□□□ -0.84
PDPN-202ENST00000376057 OR13C5Q8NGS8 318 aa9.78□□□□□ -0.84
PDPN-202ENST00000376057 RBM24Q9BX46 236 aaKnown RBP9.78□□□□□ -0.84
PDPN-202ENST00000376057 TPK1Q9H3S4 243 aa9.78□□□□□ -0.84
PDPN-202ENST00000376057 SP140LQ9H930 580 aa9.78□□□□□ -0.84
PDPN-202ENST00000376057 SLC22A20A6NK97 555 aa9.78□□□□□ -0.84
PDPN-202ENST00000376057 RRP8O43159 456 aaKnown RBP9.78□□□□□ -0.84
PDPN-202ENST00000376057 SRYQ05066 204 aa9.78□□□□□ -0.84
PDPN-202ENST00000376057 SGCAQ16586 387 aa9.78□□□□□ -0.84
PDPN-202ENST00000376057 CORO6Q6QEF8 472 aa9.78□□□□□ -0.84
PDPN-202ENST00000376057 TUSC5Q8IXB3 177 aa9.78□□□□□ -0.84
PDPN-202ENST00000376057 CDH26Q8IXH8 852 aa9.78□□□□□ -0.84
PDPN-202ENST00000376057 FNDC9Q8TBE3 224 aa9.78□□□□□ -0.84
PDPN-202ENST00000376057 ASB5Q8WWX0 329 aa9.78□□□□□ -0.84
PDPN-202ENST00000376057 WNT2BQ93097 391 aa9.78□□□□□ -0.84
PDPN-202ENST00000376057 FOXB1Q99853 325 aa9.78□□□□□ -0.84
PDPN-202ENST00000376057 PBOV1Q9GZY1 135 aa9.78□□□□□ -0.84
PDPN-202ENST00000376057 SLC22A13Q9Y226 551 aa9.78□□□□□ -0.84
PDPN-202ENST00000376057 POLR1DQ9Y2S0 133 aa9.78□□□□□ -0.84
PDPN-202ENST00000376057 EMC9Q9Y3B6 208 aa9.78□□□□□ -0.84
PDPN-202ENST00000376057 A0A0U1RQV5 110 aa9.77□□□□□ -0.85
PDPN-202ENST00000376057 AIPO00170 330 aa9.77□□□□□ -0.85
PDPN-202ENST00000376057 COX5BP10606 129 aa9.77□□□□□ -0.85
PDPN-202ENST00000376057 KRTCAP3Q53RY4 240 aa9.77□□□□□ -0.85
PDPN-202ENST00000376057 STAC2Q6ZMT1 411 aa9.77□□□□□ -0.85
PDPN-202ENST00000376057 SLC22A24Q8N4F4 322 aa9.77□□□□□ -0.85
PDPN-202ENST00000376057 PLPP7Q8NBV4 271 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms