RNA–Protein interactions for RNA: ENST00000375608.7

MCF2L-204, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 3,648 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-204ENST00000375608 SERTAD3Q9UJW9 196 aa12.42□□□□□ -0.42
MCF2L-204ENST00000375608 NPIPA1Q9UND3 350 aa12.42□□□□□ -0.42
MCF2L-204ENST00000375608 AUP1Q9Y679 476 aa12.42□□□□□ -0.42
MCF2L-204ENST00000375608 ANAPC1Q9H1A4 1944 aa12.41□□□□□ -0.42
MCF2L-204ENST00000375608 ZNF254O75437 659 aa12.41□□□□□ -0.42
MCF2L-204ENST00000375608 CBX5P45973 191 aa12.41□□□□□ -0.42
MCF2L-204ENST00000375608 SLC6A9P48067 706 aa12.41□□□□□ -0.42
MCF2L-204ENST00000375608 NR0B2Q15466 257 aa12.41□□□□□ -0.42
MCF2L-204ENST00000375608 CD226Q15762 336 aa12.41□□□□□ -0.42
MCF2L-204ENST00000375608 TMEM225Q6GV28 225 aa12.41□□□□□ -0.42
MCF2L-204ENST00000375608 SLC36A1Q7Z2H8 476 aa12.41□□□□□ -0.42
MCF2L-204ENST00000375608 FAM60AQ9NP50 221 aa12.41□□□□□ -0.42
MCF2L-204ENST00000375608 NDRG3Q9UGV2 375 aa12.41□□□□□ -0.42
MCF2L-204ENST00000375608 MAFFQ9ULX9 164 aa12.41□□□□□ -0.42
MCF2L-204ENST00000375608 LOC107986453A0A1B0GWG9 222 aa12.41□□□□□ -0.42
MCF2L-204ENST00000375608 HSD11B1P28845 292 aa12.41□□□□□ -0.42
MCF2L-204ENST00000375608 HHEXQ03014 270 aa12.41□□□□□ -0.42
MCF2L-204ENST00000375608 DCXRQ7Z4W1 244 aa12.41□□□□□ -0.42
MCF2L-204ENST00000375608 MCATQ8IVS2 390 aaKnown RBP12.41□□□□□ -0.42
MCF2L-204ENST00000375608 OR5M8Q8NGP6 311 aa12.41□□□□□ -0.42
MCF2L-204ENST00000375608 SPPL3Q8TCT6 385 aa12.41□□□□□ -0.42
MCF2L-204ENST00000375608 TCEAL3Q969E4 200 aa12.41□□□□□ -0.42
MCF2L-204ENST00000375608 CCDC163A0A0D9SF12 145 aa12.41□□□□□ -0.42
MCF2L-204ENST00000375608 CRTAPO75718 401 aaPredicted RBP12.41□□□□□ -0.42
MCF2L-204ENST00000375608 ALOX5APP20292 161 aa12.41□□□□□ -0.42
MCF2L-204ENST00000375608 MPGP29372 298 aa12.41□□□□□ -0.42
MCF2L-204ENST00000375608 SRSF3P84103 164 aaKnown RBP12.41□□□□□ -0.42
MCF2L-204ENST00000375608 TGIF1Q15583 401 aa12.41□□□□□ -0.42
MCF2L-204ENST00000375608 NUP54Q7Z3B4 507 aa12.41□□□□□ -0.42
MCF2L-204ENST00000375608 ADAD2Q8NCV1 583 aaKnown RBP12.41□□□□□ -0.42
MCF2L-204ENST00000375608 OR1M1Q8NGA1 313 aa12.41□□□□□ -0.42
MCF2L-204ENST00000375608 TOMM40LQ969M1 308 aa12.41□□□□□ -0.42
MCF2L-204ENST00000375608 TGM7Q96PF1 710 aa12.41□□□□□ -0.42
MCF2L-204ENST00000375608 TCEAL2Q9H3H9 227 aaPredicted RBP12.41□□□□□ -0.42
MCF2L-204ENST00000375608 UBQLN4Q9NRR5 601 aa12.41□□□□□ -0.42
MCF2L-204ENST00000375608 RNF215Q9Y6U7 377 aa12.41□□□□□ -0.42
MCF2L-204ENST00000375608 UPK3AO75631 287 aa12.4□□□□□ -0.42
MCF2L-204ENST00000375608 NKX2-2O95096 273 aa12.4□□□□□ -0.42
MCF2L-204ENST00000375608 PNMTP11086 282 aa12.4□□□□□ -0.42
MCF2L-204ENST00000375608 MEOX2P50222 304 aa12.4□□□□□ -0.42
MCF2L-204ENST00000375608 SLC17A1Q14916 467 aa12.4□□□□□ -0.42
MCF2L-204ENST00000375608 ZNF74Q16587 644 aa12.4□□□□□ -0.42
MCF2L-204ENST00000375608 MAMDC2Q7Z304 686 aaPredicted RBP12.4□□□□□ -0.42
MCF2L-204ENST00000375608 ADGRE4PQ86SQ3 457 aa12.4□□□□□ -0.42
MCF2L-204ENST00000375608 NAA40Q86UY6 237 aa12.4□□□□□ -0.42
MCF2L-204ENST00000375608 ZNF679Q8IYX0 411 aa12.4□□□□□ -0.42
MCF2L-204ENST00000375608 EXOSC3Q9NQT5 275 aaKnown RBP12.4□□□□□ -0.42
MCF2L-204ENST00000375608 RHBDD3Q9Y3P4 386 aa12.4□□□□□ -0.42
MCF2L-204ENST00000375608 CDH23Q9H251 3354 aa12.4□□□□□ -0.42
MCF2L-204ENST00000375608 CPED1A4D0V7 1026 aa12.4□□□□□ -0.42
MCF2L-204ENST00000375608 EFCAB7A8K855 629 aa12.4□□□□□ -0.42
MCF2L-204ENST00000375608 TMEM150CB9EJG8 249 aa12.4□□□□□ -0.42
MCF2L-204ENST00000375608 ARPC3O15145 178 aa12.4□□□□□ -0.42
MCF2L-204ENST00000375608 LMX1BO60663 402 aa12.4□□□□□ -0.42
MCF2L-204ENST00000375608 TSPAN15O95858 294 aa12.4□□□□□ -0.42
MCF2L-204ENST00000375608 PNPP00491 289 aa12.4□□□□□ -0.42
MCF2L-204ENST00000375608 GUCA1AP43080 201 aaPredicted RBP12.4□□□□□ -0.42
MCF2L-204ENST00000375608 CSNK2A1P68400 391 aaPredicted RBP12.4□□□□□ -0.42
MCF2L-204ENST00000375608 TFF2Q03403 129 aa12.4□□□□□ -0.42
MCF2L-204ENST00000375608 ELAVL1Q15717 326 aaKnown RBP12.4□□□□□ -0.42
MCF2L-204ENST00000375608 Q6ZSR6 202 aa12.4□□□□□ -0.42
MCF2L-204ENST00000375608 ANGPTL5Q86XS5 388 aa12.4□□□□□ -0.42
MCF2L-204ENST00000375608 CLEC1AQ8NC01 280 aa12.4□□□□□ -0.42
MCF2L-204ENST00000375608 CSNK2A3Q8NEV1 391 aa12.4□□□□□ -0.42
MCF2L-204ENST00000375608 TAAR8Q969N4 342 aa12.4□□□□□ -0.42
MCF2L-204ENST00000375608 AKR1E2Q96JD6 320 aa12.4□□□□□ -0.42
MCF2L-204ENST00000375608 TSPAN32Q96QS1 320 aa12.4□□□□□ -0.42
MCF2L-204ENST00000375608 ZNF700Q9H0M5 742 aa12.4□□□□□ -0.42
MCF2L-204ENST00000375608 ZFP57Q9NU63 452 aa12.4□□□□□ -0.42
MCF2L-204ENST00000375608 ANKRD10Q9NXR5 420 aa12.4□□□□□ -0.42
MCF2L-204ENST00000375608 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.39□□□□□ -0.43
MCF2L-204ENST00000375608 TRAV14DV4A0A0A6YYC5 116 aa12.39□□□□□ -0.43
MCF2L-204ENST00000375608 TNFSF12O43508 249 aa12.39□□□□□ -0.43
MCF2L-204ENST00000375608 LRP3O75074 770 aa12.39□□□□□ -0.43
MCF2L-204ENST00000375608 GLO1Q04760 184 aa12.39□□□□□ -0.43
MCF2L-204ENST00000375608 FMODQ06828 376 aa12.39□□□□□ -0.43
MCF2L-204ENST00000375608 MFGE8Q08431 387 aaPredicted RBP12.39□□□□□ -0.43
MCF2L-204ENST00000375608 GPM6BQ13491 265 aa12.39□□□□□ -0.43
MCF2L-204ENST00000375608 TOMM34Q15785 309 aaPredicted RBP12.39□□□□□ -0.43
MCF2L-204ENST00000375608 MESTQ5EB52 335 aa12.39□□□□□ -0.43
MCF2L-204ENST00000375608 C1orf189Q5VU69 101 aa12.39□□□□□ -0.43
MCF2L-204ENST00000375608 EIF5AL1Q6IS14 154 aaKnown RBP12.39□□□□□ -0.43
MCF2L-204ENST00000375608 UNQ9370/PRO34162Q6UXP9 181 aa12.39□□□□□ -0.43
MCF2L-204ENST00000375608 ZNF704Q6ZNC4 412 aaPredicted RBP12.39□□□□□ -0.43
MCF2L-204ENST00000375608 PRSS35Q8N3Z0 413 aa12.39□□□□□ -0.43
MCF2L-204ENST00000375608 NECAB3Q96P71 396 aaPredicted RBP12.39□□□□□ -0.43
MCF2L-204ENST00000375608 ABHD6Q9BV23 337 aa12.39□□□□□ -0.43
MCF2L-204ENST00000375608 NXF5Q9H1B4 397 aaKnown RBP12.39□□□□□ -0.43
MCF2L-204ENST00000375608 MMP25Q9NPA2 562 aa12.39□□□□□ -0.43
MCF2L-204ENST00000375608 MST1P26927 711 aa12.39□□□□□ -0.43
MCF2L-204ENST00000375608 RBMXP38159 391 aaKnown RBP12.39□□□□□ -0.43
MCF2L-204ENST00000375608 ID4P47928 161 aa12.39□□□□□ -0.43
MCF2L-204ENST00000375608 ETV3LQ6ZN32 361 aa12.39□□□□□ -0.43
MCF2L-204ENST00000375608 TMPPEQ6ZT21 453 aa12.39□□□□□ -0.43
MCF2L-204ENST00000375608 LYG2Q86SG7 212 aa12.39□□□□□ -0.43
MCF2L-204ENST00000375608 SLC37A2Q8TED4 501 aa12.39□□□□□ -0.43
MCF2L-204ENST00000375608 TMEM106CQ9BVX2 250 aa12.39□□□□□ -0.43
MCF2L-204ENST00000375608 SFXN1Q9H9B4 322 aa12.39□□□□□ -0.43
MCF2L-204ENST00000375608 VSIG4Q9Y279 399 aa12.39□□□□□ -0.43
MCF2L-204ENST00000375608 MRPS18BQ9Y676 258 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms