RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 OR10S1Q8NGN2 331 aa12.99□□□□□ -0.33
HSPG2-201ENST00000374673 OR1F12Q8NHA8 337 aa12.99□□□□□ -0.33
HSPG2-201ENST00000374673 OTOSQ8NHW6 89 aa12.99□□□□□ -0.33
HSPG2-201ENST00000374673 ST7LQ8TDW4 575 aa12.99□□□□□ -0.33
HSPG2-201ENST00000374673 AKAP1Q92667 903 aaKnown RBP eCLIP12.99□□□□□ -0.33
HSPG2-201ENST00000374673 NEUROG1Q92886 237 aa12.99□□□□□ -0.33
HSPG2-201ENST00000374673 POU2F3Q9UKI9 436 aa12.99□□□□□ -0.33
HSPG2-201ENST00000374673 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.99□□□□□ -0.33
HSPG2-201ENST00000374673 NBPF19A0A087WUL8 3843 aa12.99□□□□□ -0.33
HSPG2-201ENST00000374673 E7EQL1 145 aa12.98□□□□□ -0.33
HSPG2-201ENST00000374673 HS3ST1O14792 307 aa12.98□□□□□ -0.33
HSPG2-201ENST00000374673 ICMTO60725 284 aa12.98□□□□□ -0.33
HSPG2-201ENST00000374673 ENTPD6O75354 484 aa12.98□□□□□ -0.33
HSPG2-201ENST00000374673 CLIC3O95833 236 aa12.98□□□□□ -0.33
HSPG2-201ENST00000374673 CCL2P13500 99 aa12.98□□□□□ -0.33
HSPG2-201ENST00000374673 NR4A1P22736 598 aa12.98□□□□□ -0.33
HSPG2-201ENST00000374673 PCSK6P29122 969 aa12.98□□□□□ -0.33
HSPG2-201ENST00000374673 KRTAP10-9P60411 292 aa12.98□□□□□ -0.33
HSPG2-201ENST00000374673 NKX6-1P78426 367 aaPredicted RBP12.98□□□□□ -0.33
HSPG2-201ENST00000374673 GALK2Q01415 458 aa12.98□□□□□ -0.33
HSPG2-201ENST00000374673 POU4F2Q12837 409 aa12.98□□□□□ -0.33
HSPG2-201ENST00000374673 ECH1Q13011 328 aa12.98□□□□□ -0.33
HSPG2-201ENST00000374673 EIF2B1Q14232 305 aaKnown RBP12.98□□□□□ -0.33
HSPG2-201ENST00000374673 MAD2L1BPQ15013 274 aaPredicted RBP12.98□□□□□ -0.33
HSPG2-201ENST00000374673 USP51Q70EK9 711 aa12.98□□□□□ -0.33
HSPG2-201ENST00000374673 PAQR4Q8N4S7 273 aaPredicted RBP12.98□□□□□ -0.33
HSPG2-201ENST00000374673 APH1BQ8WW43 257 aa12.98□□□□□ -0.33
HSPG2-201ENST00000374673 TFAP2CQ92754 450 aa12.98□□□□□ -0.33
HSPG2-201ENST00000374673 FBXW5Q969U6 566 aa12.98□□□□□ -0.33
HSPG2-201ENST00000374673 SLAMF6Q96DU3 332 aa12.98□□□□□ -0.33
HSPG2-201ENST00000374673 Q96MT0 163 aa12.98□□□□□ -0.33
HSPG2-201ENST00000374673 CNN2Q99439 309 aaKnown RBP12.98□□□□□ -0.33
HSPG2-201ENST00000374673 ATF6BQ99941 703 aa12.98□□□□□ -0.33
HSPG2-201ENST00000374673 YIPF3Q9GZM5 350 aa12.98□□□□□ -0.33
HSPG2-201ENST00000374673 ADGRL4Q9HBW9 690 aa12.98□□□□□ -0.33
HSPG2-201ENST00000374673 DDX28Q9NUL7 540 aaKnown RBP12.98□□□□□ -0.33
HSPG2-201ENST00000374673 CISD1Q9NZ45 108 aaKnown RBP12.98□□□□□ -0.33
HSPG2-201ENST00000374673 SPEF1Q9Y4P9 236 aa12.98□□□□□ -0.33
HSPG2-201ENST00000374673 ATP23Q9Y6H3 246 aa12.98□□□□□ -0.33
HSPG2-201ENST00000374673 HSPE1-MOB4S4R3N1 261 aa12.98□□□□□ -0.33
HSPG2-201ENST00000374673 ABCA4P78363 2273 aa12.98□□□□□ -0.33
HSPG2-201ENST00000374673 C5orf49A4QMS7 147 aa12.97□□□□□ -0.33
HSPG2-201ENST00000374673 SNTNA6NMZ2 147 aa12.97□□□□□ -0.33
HSPG2-201ENST00000374673 LYNP07948 512 aa12.97□□□□□ -0.33
HSPG2-201ENST00000374673 MRPL3P09001 348 aaKnown RBP12.97□□□□□ -0.33
HSPG2-201ENST00000374673 SBK2P0C263 348 aa12.97□□□□□ -0.33
HSPG2-201ENST00000374673 CCNOP22674 350 aa12.97□□□□□ -0.33
HSPG2-201ENST00000374673 VHLP40337 213 aa12.97□□□□□ -0.33
HSPG2-201ENST00000374673 ISL1P61371 349 aa12.97□□□□□ -0.33
HSPG2-201ENST00000374673 IL5RAQ01344 420 aa12.97□□□□□ -0.33
HSPG2-201ENST00000374673 SNTB2Q13425 540 aaKnown RBP12.97□□□□□ -0.33
HSPG2-201ENST00000374673 KRTAP27-1Q3LI81 207 aa12.97□□□□□ -0.33
HSPG2-201ENST00000374673 KRT80Q6KB66 452 aa12.97□□□□□ -0.33
HSPG2-201ENST00000374673 TMEM154Q6P9G4 183 aa12.97□□□□□ -0.33
HSPG2-201ENST00000374673 RHOUQ7L0Q8 258 aa12.97□□□□□ -0.33
HSPG2-201ENST00000374673 ZNF611Q8N823 705 aa12.97□□□□□ -0.33
HSPG2-201ENST00000374673 IPCEF1Q8WWN9 437 aaPredicted RBP12.97□□□□□ -0.33
HSPG2-201ENST00000374673 DCLRE1CQ96SD1 692 aaKnown RBP12.97□□□□□ -0.33
HSPG2-201ENST00000374673 MNTQ99583 582 aa12.97□□□□□ -0.33
HSPG2-201ENST00000374673 ABHD6Q9BV23 337 aa12.97□□□□□ -0.33
HSPG2-201ENST00000374673 ZNF442Q9H7R0 627 aa12.97□□□□□ -0.33
HSPG2-201ENST00000374673 UBTD1Q9HAC8 227 aa12.97□□□□□ -0.33
HSPG2-201ENST00000374673 CLN6Q9NWW5 311 aa12.97□□□□□ -0.33
HSPG2-201ENST00000374673 AASSQ9UDR5 926 aa12.97□□□□□ -0.33
HSPG2-201ENST00000374673 ZNF878C9JN71 531 aa12.96□□□□□ -0.33
HSPG2-201ENST00000374673 SMPD2O60906 423 aa12.96□□□□□ -0.33
HSPG2-201ENST00000374673 WBP4O75554 376 aaKnown RBP12.96□□□□□ -0.33
HSPG2-201ENST00000374673 ALOX5APP20292 161 aa12.96□□□□□ -0.33
HSPG2-201ENST00000374673 GLRXP35754 106 aa12.96□□□□□ -0.33
HSPG2-201ENST00000374673 WNT5AP41221 380 aa12.96□□□□□ -0.33
HSPG2-201ENST00000374673 MTNR1AP48039 350 aa12.96□□□□□ -0.33
HSPG2-201ENST00000374673 HSPA13P48723 471 aa12.96□□□□□ -0.33
HSPG2-201ENST00000374673 NUDT6P53370 316 aa12.96□□□□□ -0.33
HSPG2-201ENST00000374673 ZNF544Q6NX49 715 aa12.96□□□□□ -0.33
HSPG2-201ENST00000374673 IZUMO2Q6UXV1 221 aa12.96□□□□□ -0.33
HSPG2-201ENST00000374673 C20orf204Q6ZNR8 217 aa12.96□□□□□ -0.33
HSPG2-201ENST00000374673 C8orf59Q8N0T1 100 aaPredicted RBP12.96□□□□□ -0.33
HSPG2-201ENST00000374673 OR51G2Q8NGK0 314 aa12.96□□□□□ -0.33
HSPG2-201ENST00000374673 RNF133Q8WVZ7 376 aa12.96□□□□□ -0.33
HSPG2-201ENST00000374673 SLC7A6Q92536 515 aa12.96□□□□□ -0.33
HSPG2-201ENST00000374673 C4orf45Q96LM5 186 aa12.96□□□□□ -0.33
HSPG2-201ENST00000374673 AMELYQ99218 206 aa12.96□□□□□ -0.33
HSPG2-201ENST00000374673 DHRS9Q9BPW9 319 aa12.96□□□□□ -0.33
HSPG2-201ENST00000374673 BCL2L14Q9BZR8 327 aa12.96□□□□□ -0.33
HSPG2-201ENST00000374673 CA10Q9NS85 328 aa12.96□□□□□ -0.33
HSPG2-201ENST00000374673 EIF3KQ9UBQ5 218 aaKnown RBP12.96□□□□□ -0.33
HSPG2-201ENST00000374673 LAMP5Q9UJQ1 280 aa12.96□□□□□ -0.33
HSPG2-201ENST00000374673 TMEM14AQ9Y6G1 99 aa12.96□□□□□ -0.33
HSPG2-201ENST00000374673 HECTD1Q9ULT8 2610 aa12.96□□□□□ -0.33
HSPG2-201ENST00000374673 CACNA1DQ01668 2161 aa12.96□□□□□ -0.34
HSPG2-201ENST00000374673 RTTNQ86VV8 2226 aa12.95□□□□□ -0.34
HSPG2-201ENST00000374673 J3QW42 95 aa12.95□□□□□ -0.34
HSPG2-201ENST00000374673 PHYHO14832 338 aa12.95□□□□□ -0.34
HSPG2-201ENST00000374673 DBHP09172 617 aa12.95□□□□□ -0.34
HSPG2-201ENST00000374673 GNAO1P09471 354 aa12.95□□□□□ -0.34
HSPG2-201ENST00000374673 APOBEC3AP31941 199 aaPredicted RBP12.95□□□□□ -0.34
HSPG2-201ENST00000374673 OTX1P32242 354 aaPredicted RBP12.95□□□□□ -0.34
HSPG2-201ENST00000374673 RAD52P43351 418 aa12.95□□□□□ -0.34
HSPG2-201ENST00000374673 UCP2P55851 309 aa12.95□□□□□ -0.34
HSPG2-201ENST00000374673 RPS23P62266 143 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms