RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 H2BFMP0C1H6 154 aa10.78□□□□□ -0.68
HMGCL-202ENST00000374487 TMIGD3P0DMS9 266 aaPredicted RBP10.78□□□□□ -0.68
HMGCL-202ENST00000374487 PTHLHP12272 177 aa10.78□□□□□ -0.68
HMGCL-202ENST00000374487 MC2RQ01718 297 aa10.78□□□□□ -0.68
HMGCL-202ENST00000374487 EIF3IQ13347 325 aaKnown RBP10.78□□□□□ -0.68
HMGCL-202ENST00000374487 RAB11BQ15907 218 aa10.78□□□□□ -0.68
HMGCL-202ENST00000374487 PRAMEF20Q5VT98 475 aa10.78□□□□□ -0.68
HMGCL-202ENST00000374487 TMEM225Q6GV28 225 aa10.78□□□□□ -0.68
HMGCL-202ENST00000374487 CORO6Q6QEF8 472 aa10.78□□□□□ -0.68
HMGCL-202ENST00000374487 LIX1LQ8IVB5 337 aa10.78□□□□□ -0.68
HMGCL-202ENST00000374487 OR2M3Q8NG83 312 aa10.78□□□□□ -0.68
HMGCL-202ENST00000374487 POC1BQ8TC44 478 aa10.78□□□□□ -0.68
HMGCL-202ENST00000374487 GIMAP1Q8WWP7 306 aa10.78□□□□□ -0.68
HMGCL-202ENST00000374487 ASB5Q8WWX0 329 aa10.78□□□□□ -0.68
HMGCL-202ENST00000374487 FBXL3Q9UKT7 428 aa10.78□□□□□ -0.68
HMGCL-202ENST00000374487 HHLA2Q9UM44 414 aa10.78□□□□□ -0.68
HMGCL-202ENST00000374487 IGKV1D-43A0A0B4J1Z2 117 aa10.77□□□□□ -0.68
HMGCL-202ENST00000374487 A0A1W2PNV4 684 aa10.77□□□□□ -0.68
HMGCL-202ENST00000374487 EIF1AYO14602 144 aaKnown RBP10.77□□□□□ -0.68
HMGCL-202ENST00000374487 KLK10O43240 276 aa10.77□□□□□ -0.68
HMGCL-202ENST00000374487 EFSO43281 561 aa10.77□□□□□ -0.68
HMGCL-202ENST00000374487 XRCC3O43542 346 aa10.77□□□□□ -0.68
HMGCL-202ENST00000374487 GMDSO60547 372 aa10.77□□□□□ -0.68
HMGCL-202ENST00000374487 ITGA5P08648 1049 aa10.77□□□□□ -0.68
HMGCL-202ENST00000374487 WT1P19544 449 aaPredicted RBP10.77□□□□□ -0.68
HMGCL-202ENST00000374487 PSMB1P20618 241 aaKnown RBP10.77□□□□□ -0.68
HMGCL-202ENST00000374487 DNASE1L1P49184 302 aa10.77□□□□□ -0.68
HMGCL-202ENST00000374487 POU3F4P49335 361 aa10.77□□□□□ -0.68
HMGCL-202ENST00000374487 CLRN1P58418 232 aa10.77□□□□□ -0.68
HMGCL-202ENST00000374487 C19orf57Q0VDD7 668 aa10.77□□□□□ -0.68
HMGCL-202ENST00000374487 CLN3Q13286 438 aa10.77□□□□□ -0.68
HMGCL-202ENST00000374487 PCOLCEQ15113 449 aa10.77□□□□□ -0.68
HMGCL-202ENST00000374487 GSG1Q2KHT4 349 aa10.77□□□□□ -0.68
HMGCL-202ENST00000374487 GLT8D1Q68CQ7 371 aa10.77□□□□□ -0.68
HMGCL-202ENST00000374487 WDFY1Q8IWB7 410 aa10.77□□□□□ -0.68
HMGCL-202ENST00000374487 SPACA3Q8IXA5 215 aa10.77□□□□□ -0.68
HMGCL-202ENST00000374487 PLPP7Q8NBV4 271 aa10.77□□□□□ -0.68
HMGCL-202ENST00000374487 OR13C3Q8NGS6 347 aa10.77□□□□□ -0.68
HMGCL-202ENST00000374487 ZFAND1Q8TCF1 268 aa10.77□□□□□ -0.68
HMGCL-202ENST00000374487 ST7LQ8TDW4 575 aa10.77□□□□□ -0.68
HMGCL-202ENST00000374487 FAM3DQ96BQ1 224 aa10.77□□□□□ -0.68
HMGCL-202ENST00000374487 SLC25A44Q96H78 314 aaPredicted RBP10.77□□□□□ -0.68
HMGCL-202ENST00000374487 TAAR9Q96RI9 348 aa10.77□□□□□ -0.68
HMGCL-202ENST00000374487 C20orf85Q9H1P6 137 aa10.77□□□□□ -0.68
HMGCL-202ENST00000374487 SLA2Q9H6Q3 261 aa10.77□□□□□ -0.68
HMGCL-202ENST00000374487 BEX1Q9HBH7 125 aa10.77□□□□□ -0.68
HMGCL-202ENST00000374487 ZNF275Q9NSD4 429 aaPredicted RBP10.77□□□□□ -0.68
HMGCL-202ENST00000374487 OR52A1Q9UKL2 312 aa10.77□□□□□ -0.68
HMGCL-202ENST00000374487 ING4Q9UNL4 249 aa10.77□□□□□ -0.68
HMGCL-202ENST00000374487 ACACAQ13085 2346 aa10.77□□□□□ -0.69
HMGCL-202ENST00000374487 A0A1W2PNR3 127 aa10.77□□□□□ -0.69
HMGCL-202ENST00000374487 ANKRD20A5PA0PJZ0 165 aa10.77□□□□□ -0.69
HMGCL-202ENST00000374487 SLC17A2O00624 439 aa10.77□□□□□ -0.69
HMGCL-202ENST00000374487 SSNA1O43805 119 aa10.77□□□□□ -0.69
HMGCL-202ENST00000374487 DOK2O60496 412 aa10.77□□□□□ -0.69
HMGCL-202ENST00000374487 PEX14O75381 377 aa10.77□□□□□ -0.69
HMGCL-202ENST00000374487 TPPPO94811 219 aa10.77□□□□□ -0.69
HMGCL-202ENST00000374487 GLSO94925 669 aaPredicted RBP10.77□□□□□ -0.69
HMGCL-202ENST00000374487 HRGP04196 525 aa10.77□□□□□ -0.69
HMGCL-202ENST00000374487 SFTPDP35247 375 aa10.77□□□□□ -0.69
HMGCL-202ENST00000374487 MNDAP41218 407 aa10.77□□□□□ -0.69
HMGCL-202ENST00000374487 EIF1P41567 113 aaKnown RBP10.77□□□□□ -0.69
HMGCL-202ENST00000374487 EIF1AXP47813 144 aaKnown RBP10.77□□□□□ -0.69
HMGCL-202ENST00000374487 FOXK1P85037 733 aa10.77□□□□□ -0.69
HMGCL-202ENST00000374487 PLA2G7Q13093 441 aa10.77□□□□□ -0.69
HMGCL-202ENST00000374487 PCK2Q16822 640 aa10.77□□□□□ -0.69
HMGCL-202ENST00000374487 C2orf76Q3KRA6 126 aa10.77□□□□□ -0.69
HMGCL-202ENST00000374487 THEM4Q5T1C6 240 aa10.77□□□□□ -0.69
HMGCL-202ENST00000374487 CD276Q5ZPR3 534 aa10.77□□□□□ -0.69
HMGCL-202ENST00000374487 ANKRD16Q6P6B7 361 aa10.77□□□□□ -0.69
HMGCL-202ENST00000374487 DEGS2Q6QHC5 323 aa10.77□□□□□ -0.69
HMGCL-202ENST00000374487 ZNF704Q6ZNC4 412 aaPredicted RBP10.77□□□□□ -0.69
HMGCL-202ENST00000374487 WDSUB1Q8N9V3 476 aa10.77□□□□□ -0.69
HMGCL-202ENST00000374487 BEST4Q8NFU0 473 aa10.77□□□□□ -0.69
HMGCL-202ENST00000374487 SNIP1Q8TAD8 396 aaKnown RBP10.77□□□□□ -0.69
HMGCL-202ENST00000374487 TMEM165Q9HC07 324 aa10.77□□□□□ -0.69
HMGCL-202ENST00000374487 B3GAT1Q9P2W7 334 aa10.77□□□□□ -0.69
HMGCL-202ENST00000374487 CHCHD2Q9Y6H1 151 aaPredicted RBP10.77□□□□□ -0.69
HMGCL-202ENST00000374487 SDK2Q58EX2 2172 aa10.77□□□□□ -0.69
HMGCL-202ENST00000374487 LOC102723996A0A087X1L8 192 aa10.76□□□□□ -0.69
HMGCL-202ENST00000374487 IGHV1-45A0A0A0MS14 117 aa10.76□□□□□ -0.69
HMGCL-202ENST00000374487 LOC100289279A0A1B0GTE1 492 aa10.76□□□□□ -0.69
HMGCL-202ENST00000374487 A0A1W2PPL8 197 aa10.76□□□□□ -0.69
HMGCL-202ENST00000374487 A0A1W2PQ72 361 aa10.76□□□□□ -0.69
HMGCL-202ENST00000374487 FABP7O15540 132 aa10.76□□□□□ -0.69
HMGCL-202ENST00000374487 RBBP9O75884 186 aa10.76□□□□□ -0.69
HMGCL-202ENST00000374487 TNK1Q13470 666 aa10.76□□□□□ -0.69
HMGCL-202ENST00000374487 CAMK2DQ13557 499 aa10.76□□□□□ -0.69
HMGCL-202ENST00000374487 EXT1Q16394 746 aa10.76□□□□□ -0.69
HMGCL-202ENST00000374487 TMEM176BQ3YBM2 270 aaPredicted RBP10.76□□□□□ -0.69
HMGCL-202ENST00000374487 DCAF12Q5T6F0 453 aa10.76□□□□□ -0.69
HMGCL-202ENST00000374487 KLHL24Q6TFL4 600 aa10.76□□□□□ -0.69
HMGCL-202ENST00000374487 IGF2-ASQ6U949 168 aa10.76□□□□□ -0.69
HMGCL-202ENST00000374487 ANKRD11Q6UB99 2663 aaPredicted RBP10.76□□□□□ -0.69
HMGCL-202ENST00000374487 LUZP2Q86TE4 346 aa10.76□□□□□ -0.69
HMGCL-202ENST00000374487 PLCZ1Q86YW0 608 aa10.76□□□□□ -0.69
HMGCL-202ENST00000374487 MGAQ8IWI9 3026 aa10.76□□□□□ -0.69
HMGCL-202ENST00000374487 SLC25A43Q8WUT9 341 aaPredicted RBP10.76□□□□□ -0.69
HMGCL-202ENST00000374487 C11orf40Q8WZ69 217 aa10.76□□□□□ -0.69
HMGCL-202ENST00000374487 HYLS1Q96M11 299 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms