RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 CCDC92Q53HC0 331 aaPredicted RBP13.79□□□□□ -0.2
NIPAL3-204ENST00000374399 RHOUQ7L0Q8 258 aa13.79□□□□□ -0.2
NIPAL3-204ENST00000374399 LRRC18Q8N456 261 aa13.79□□□□□ -0.2
NIPAL3-204ENST00000374399 OR5M9Q8NGP3 310 aa13.79□□□□□ -0.2
NIPAL3-204ENST00000374399 OR2AJ1Q8NGZ0 328 aa13.79□□□□□ -0.2
NIPAL3-204ENST00000374399 MCFD2Q8NI22 146 aa13.79□□□□□ -0.2
NIPAL3-204ENST00000374399 FGFBP3Q8TAT2 258 aa13.79□□□□□ -0.2
NIPAL3-204ENST00000374399 SARAFQ96BY9 339 aa13.79□□□□□ -0.2
NIPAL3-204ENST00000374399 ORAI1Q96D31 301 aa13.79□□□□□ -0.2
NIPAL3-204ENST00000374399 SH3GL3Q99963 347 aa13.79□□□□□ -0.2
NIPAL3-204ENST00000374399 PARPBPQ9NWS1 579 aa13.79□□□□□ -0.2
NIPAL3-204ENST00000374399 FAM206AQ9NX38 181 aa13.79□□□□□ -0.2
NIPAL3-204ENST00000374399 POLR1DQ9Y2S0 133 aa13.79□□□□□ -0.2
NIPAL3-204ENST00000374399 EMC9Q9Y3B6 208 aa13.79□□□□□ -0.2
NIPAL3-204ENST00000374399 DSPP15924 2871 aaKnown RBP13.79□□□□□ -0.2
NIPAL3-204ENST00000374399 NCR1O76036 304 aa13.78□□□□□ -0.2
NIPAL3-204ENST00000374399 H2BFMP0C1H6 154 aa13.78□□□□□ -0.2
NIPAL3-204ENST00000374399 CALRP27797 417 aaKnown RBP13.78□□□□□ -0.2
NIPAL3-204ENST00000374399 DCTDP32321 178 aa13.78□□□□□ -0.2
NIPAL3-204ENST00000374399 MTNR1BP49286 362 aa13.78□□□□□ -0.2
NIPAL3-204ENST00000374399 BMXP51813 675 aa13.78□□□□□ -0.2
NIPAL3-204ENST00000374399 UCNP55089 124 aa13.78□□□□□ -0.2
NIPAL3-204ENST00000374399 ZFAND2BQ8WV99 257 aa13.78□□□□□ -0.2
NIPAL3-204ENST00000374399 GPR137Q96N19 417 aa13.78□□□□□ -0.2
NIPAL3-204ENST00000374399 FOXB1Q99853 325 aa13.78□□□□□ -0.2
NIPAL3-204ENST00000374399 MMP27Q9H306 513 aa13.78□□□□□ -0.2
NIPAL3-204ENST00000374399 GP6Q9HCN6 339 aa13.78□□□□□ -0.2
NIPAL3-204ENST00000374399 ZNF71Q9NQZ8 489 aaPredicted RBP13.78□□□□□ -0.2
NIPAL3-204ENST00000374399 DDX28Q9NUL7 540 aaKnown RBP13.78□□□□□ -0.2
NIPAL3-204ENST00000374399 A0A0G2JK05 382 aa13.78□□□□□ -0.2
NIPAL3-204ENST00000374399 ACOD1A6NK06 481 aa13.78□□□□□ -0.2
NIPAL3-204ENST00000374399 TMEM212A6NML5 194 aa13.78□□□□□ -0.2
NIPAL3-204ENST00000374399 ZNF879B4DU55 563 aa13.78□□□□□ -0.2
NIPAL3-204ENST00000374399 ZNF878C9JN71 531 aa13.78□□□□□ -0.2
NIPAL3-204ENST00000374399 SS18L1O75177 396 aaPredicted RBP13.78□□□□□ -0.2
NIPAL3-204ENST00000374399 GATBO75879 557 aaKnown RBP13.78□□□□□ -0.2
NIPAL3-204ENST00000374399 SERPINA3P01011 423 aa13.78□□□□□ -0.2
NIPAL3-204ENST00000374399 B4GALT1P15291 398 aa13.78□□□□□ -0.2
NIPAL3-204ENST00000374399 NPR2P20594 1047 aa13.78□□□□□ -0.2
NIPAL3-204ENST00000374399 RORCP51449 518 aa13.78□□□□□ -0.2
NIPAL3-204ENST00000374399 MMP16P51512 607 aa13.78□□□□□ -0.2
NIPAL3-204ENST00000374399 CXADRP78310 365 aa13.78□□□□□ -0.2
NIPAL3-204ENST00000374399 HNRNPA0Q13151 305 aaKnown RBP13.78□□□□□ -0.2
NIPAL3-204ENST00000374399 MOGQ16653 247 aa13.78□□□□□ -0.2
NIPAL3-204ENST00000374399 ODF4Q2M2E3 257 aa13.78□□□□□ -0.2
NIPAL3-204ENST00000374399 CEP78Q5JTW2 689 aa13.78□□□□□ -0.2
NIPAL3-204ENST00000374399 LINC00299Q6ZSB3 139 aa13.78□□□□□ -0.2
NIPAL3-204ENST00000374399 APH1AQ96BI3 265 aa13.78□□□□□ -0.2
NIPAL3-204ENST00000374399 DERL3Q96Q80 235 aa13.78□□□□□ -0.2
NIPAL3-204ENST00000374399 B3GAT2Q9NPZ5 323 aa13.78□□□□□ -0.2
NIPAL3-204ENST00000374399 AKIP1Q9NQ31 210 aa13.78□□□□□ -0.2
NIPAL3-204ENST00000374399 A0A075B6Q4 140 aa13.77□□□□□ -0.21
NIPAL3-204ENST00000374399 TMEM269A0A1B0GVZ9 245 aa13.77□□□□□ -0.21
NIPAL3-204ENST00000374399 OR14I1A6ND48 311 aa13.77□□□□□ -0.21
NIPAL3-204ENST00000374399 DOK2O60496 412 aa13.77□□□□□ -0.21
NIPAL3-204ENST00000374399 CST2P09228 141 aa13.77□□□□□ -0.21
NIPAL3-204ENST00000374399 FAM87AP0C7U9 286 aa13.77□□□□□ -0.21
NIPAL3-204ENST00000374399 CTSSP25774 331 aa13.77□□□□□ -0.21
NIPAL3-204ENST00000374399 ZNF627Q7L945 461 aa13.77□□□□□ -0.21
NIPAL3-204ENST00000374399 SYT9Q86SS6 491 aa13.77□□□□□ -0.21
NIPAL3-204ENST00000374399 SKA3Q8IX90 412 aa13.77□□□□□ -0.21
NIPAL3-204ENST00000374399 MFSD4AQ8N468 514 aa13.77□□□□□ -0.21
NIPAL3-204ENST00000374399 SLC22A24Q8N4F4 322 aa13.77□□□□□ -0.21
NIPAL3-204ENST00000374399 C9orf106Q8NAJ2 232 aa13.77□□□□□ -0.21
NIPAL3-204ENST00000374399 GMPPAQ96IJ6 420 aaPredicted RBP13.77□□□□□ -0.21
NIPAL3-204ENST00000374399 TRIB1Q96RU8 372 aa13.77□□□□□ -0.21
NIPAL3-204ENST00000374399 KCNS3Q9BQ31 491 aa13.77□□□□□ -0.21
NIPAL3-204ENST00000374399 NOX4Q9NPH5 578 aa13.77□□□□□ -0.21
NIPAL3-204ENST00000374399 ZNF224Q9NZL3 707 aa13.77□□□□□ -0.21
NIPAL3-204ENST00000374399 PRSS50Q9UI38 385 aa13.77□□□□□ -0.21
NIPAL3-204ENST00000374399 OR52A1Q9UKL2 312 aa13.77□□□□□ -0.21
NIPAL3-204ENST00000374399 TRBV5-7A0A0A0MS05 114 aa13.76□□□□□ -0.21
NIPAL3-204ENST00000374399 TRAV1-2A0A0B4J238 106 aa13.76□□□□□ -0.21
NIPAL3-204ENST00000374399 LOC110117498-PIK3R3F6TDL0 507 aa13.76□□□□□ -0.21
NIPAL3-204ENST00000374399 H3BSH0 61 aa13.76□□□□□ -0.21
NIPAL3-204ENST00000374399 CTDSP2O14595 271 aa13.76□□□□□ -0.21
NIPAL3-204ENST00000374399 CASKO14936 926 aa13.76□□□□□ -0.21
NIPAL3-204ENST00000374399 PATE4P0C8F1 98 aa13.76□□□□□ -0.21
NIPAL3-204ENST00000374399 FCGR2AP12318 317 aa13.76□□□□□ -0.21
NIPAL3-204ENST00000374399 BMP4P12644 408 aa13.76□□□□□ -0.21
NIPAL3-204ENST00000374399 SOX6P35712 828 aa13.76□□□□□ -0.21
NIPAL3-204ENST00000374399 GUCA1AP43080 201 aaPredicted RBP13.76□□□□□ -0.21
NIPAL3-204ENST00000374399 OR10A3P58181 314 aa13.76□□□□□ -0.21
NIPAL3-204ENST00000374399 STK11Q15831 433 aa13.76□□□□□ -0.21
NIPAL3-204ENST00000374399 Q499Y3 187 aa13.76□□□□□ -0.21
NIPAL3-204ENST00000374399 ACSF3Q4G176 576 aaPredicted RBP13.76□□□□□ -0.21
NIPAL3-204ENST00000374399 ASPHD2Q6ICH7 369 aa13.76□□□□□ -0.21
NIPAL3-204ENST00000374399 KLHL24Q6TFL4 600 aa13.76□□□□□ -0.21
NIPAL3-204ENST00000374399 SEM1Q6ZVN7 128 aa13.76□□□□□ -0.21
NIPAL3-204ENST00000374399 PRSS45Q7RTY3 260 aa13.76□□□□□ -0.21
NIPAL3-204ENST00000374399 MCEMP1Q8IX19 187 aa13.76□□□□□ -0.21
NIPAL3-204ENST00000374399 GJC3Q8NFK1 279 aa13.76□□□□□ -0.21
NIPAL3-204ENST00000374399 GFI1Q99684 422 aa13.76□□□□□ -0.21
NIPAL3-204ENST00000374399 ZNF319Q9P2F9 582 aa13.76□□□□□ -0.21
NIPAL3-204ENST00000374399 SLC5A6Q9Y289 635 aa13.76□□□□□ -0.21
NIPAL3-204ENST00000374399 TLN1Q9Y490 2541 aaKnown RBP13.76□□□□□ -0.21
NIPAL3-204ENST00000374399 IQCMA0A1B0GVH7 501 aa13.76□□□□□ -0.21
NIPAL3-204ENST00000374399 C5orf63A6NC05 138 aa13.76□□□□□ -0.21
NIPAL3-204ENST00000374399 OR6C65A6NJZ3 312 aa13.76□□□□□ -0.21
NIPAL3-204ENST00000374399 E9PLN8 166 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms