RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 FGF20Q9NP95 211 aaPredicted RBP12.98□□□□□ -0.33
LMX1B-202ENST00000373474 TRAV20A0A0B4J274 112 aa12.98□□□□□ -0.33
LMX1B-202ENST00000373474 ASPDHA6ND91 283 aa12.98□□□□□ -0.33
LMX1B-202ENST00000373474 H3BNC9 293 aa12.98□□□□□ -0.33
LMX1B-202ENST00000373474 ETHE1O95571 254 aa12.98□□□□□ -0.33
LMX1B-202ENST00000373474 NME1P15531 152 aaKnown RBP12.98□□□□□ -0.33
LMX1B-202ENST00000373474 CXCL12P48061 93 aa12.98□□□□□ -0.33
LMX1B-202ENST00000373474 UBE2IP63279 158 aaKnown RBP12.98□□□□□ -0.33
LMX1B-202ENST00000373474 IQCJQ1A5X6 159 aa12.98□□□□□ -0.33
LMX1B-202ENST00000373474 ETFRF1Q6IPR1 90 aa12.98□□□□□ -0.33
LMX1B-202ENST00000373474 SPNS2Q8IVW8 549 aa12.98□□□□□ -0.33
LMX1B-202ENST00000373474 BCORP1Q8N888 145 aa12.98□□□□□ -0.33
LMX1B-202ENST00000373474 OR13D1Q8NGV5 346 aa12.98□□□□□ -0.33
LMX1B-202ENST00000373474 CHRDL1Q9BU40 450 aa12.98□□□□□ -0.33
LMX1B-202ENST00000373474 CSAG2Q9Y5P2 127 aa12.98□□□□□ -0.33
LMX1B-202ENST00000373474 H3BQ06 376 aaPredicted RBP12.98□□□□□ -0.33
LMX1B-202ENST00000373474 FABP1P07148 127 aa12.98□□□□□ -0.33
LMX1B-202ENST00000373474 CD1EP15812 388 aa12.98□□□□□ -0.33
LMX1B-202ENST00000373474 HIST1H1CP16403 213 aaKnown RBP12.98□□□□□ -0.33
LMX1B-202ENST00000373474 USF1P22415 310 aaPredicted RBP12.98□□□□□ -0.33
LMX1B-202ENST00000373474 CD80P33681 288 aa12.98□□□□□ -0.33
LMX1B-202ENST00000373474 OR2B8PP59922 312 aa12.98□□□□□ -0.33
LMX1B-202ENST00000373474 OR2T2Q6IF00 324 aa12.98□□□□□ -0.33
LMX1B-202ENST00000373474 ZNRF4Q8WWF5 429 aa12.98□□□□□ -0.33
LMX1B-202ENST00000373474 FAM103A1Q9BTL3 118 aaKnown RBP12.98□□□□□ -0.33
LMX1B-202ENST00000373474 CABLES2Q9BTV7 478 aa12.98□□□□□ -0.33
LMX1B-202ENST00000373474 HRASLSQ9HDD0 168 aa12.98□□□□□ -0.33
LMX1B-202ENST00000373474 MTCH1Q9NZJ7 389 aa12.98□□□□□ -0.33
LMX1B-202ENST00000373474 OR5K3A6NET4 321 aa12.98□□□□□ -0.33
LMX1B-202ENST00000373474 TBPP20226 339 aa12.98□□□□□ -0.33
LMX1B-202ENST00000373474 UBE2G1P62253 170 aa12.98□□□□□ -0.33
LMX1B-202ENST00000373474 TMEM71Q6P5X7 295 aa12.98□□□□□ -0.33
LMX1B-202ENST00000373474 GLIPR1L1Q6UWM5 242 aa12.98□□□□□ -0.33
LMX1B-202ENST00000373474 AAED1Q7RTV5 226 aa12.98□□□□□ -0.33
LMX1B-202ENST00000373474 OR13H1Q8NG92 308 aa12.98□□□□□ -0.33
LMX1B-202ENST00000373474 ARSGQ96EG1 525 aa12.98□□□□□ -0.33
LMX1B-202ENST00000373474 OR6C1Q96RD1 312 aa12.98□□□□□ -0.33
LMX1B-202ENST00000373474 VAMP8Q9BV40 100 aa12.98□□□□□ -0.33
LMX1B-202ENST00000373474 ACAD8Q9UKU7 415 aa12.98□□□□□ -0.33
LMX1B-202ENST00000373474 COA3Q9Y2R0 106 aaPredicted RBP12.98□□□□□ -0.33
LMX1B-202ENST00000373474 TMEM184BQ9Y519 407 aaPredicted RBP12.98□□□□□ -0.33
LMX1B-202ENST00000373474 CER1O95813 267 aa12.98□□□□□ -0.33
LMX1B-202ENST00000373474 CHRM2P08172 466 aa12.98□□□□□ -0.33
LMX1B-202ENST00000373474 ICAM2P13598 275 aa12.98□□□□□ -0.33
LMX1B-202ENST00000373474 MGMTP16455 207 aa12.98□□□□□ -0.33
LMX1B-202ENST00000373474 NTF3P20783 257 aa12.98□□□□□ -0.33
LMX1B-202ENST00000373474 EIF1P41567 113 aaKnown RBP12.98□□□□□ -0.33
LMX1B-202ENST00000373474 TGFBR3Q03167 851 aa12.98□□□□□ -0.33
LMX1B-202ENST00000373474 LBHQ53QV2 105 aaPredicted RBP12.98□□□□□ -0.33
LMX1B-202ENST00000373474 GRINAQ7Z429 371 aa12.98□□□□□ -0.33
LMX1B-202ENST00000373474 SYT9Q86SS6 491 aa12.98□□□□□ -0.33
LMX1B-202ENST00000373474 ZFPM2Q8WW38 1151 aa12.98□□□□□ -0.33
LMX1B-202ENST00000373474 DCBLD2Q96PD2 775 aa12.98□□□□□ -0.33
LMX1B-202ENST00000373474 SPNS1Q9H2V7 528 aa12.98□□□□□ -0.33
LMX1B-202ENST00000373474 ZDHHC11Q9H8X9 412 aa12.98□□□□□ -0.33
LMX1B-202ENST00000373474 TMX2-CTNND1H3BSU7 103 aa12.97□□□□□ -0.33
LMX1B-202ENST00000373474 OR7C1O76099 320 aaPredicted RBP12.97□□□□□ -0.33
LMX1B-202ENST00000373474 SOX18P35713 384 aa12.97□□□□□ -0.33
LMX1B-202ENST00000373474 ADPRHP54922 357 aa12.97□□□□□ -0.33
LMX1B-202ENST00000373474 EXOSC2Q13868 293 aaKnown RBP12.97□□□□□ -0.33
LMX1B-202ENST00000373474 TCTN3Q6NUS6 607 aa12.97□□□□□ -0.33
LMX1B-202ENST00000373474 H1FNTQ75WM6 255 aaPredicted RBP12.97□□□□□ -0.33
LMX1B-202ENST00000373474 ZNF727A8MUV8 499 aa12.97□□□□□ -0.33
LMX1B-202ENST00000373474 NME2P1O60361 137 aa12.97□□□□□ -0.33
LMX1B-202ENST00000373474 EIF1BO60739 113 aaKnown RBP12.97□□□□□ -0.33
LMX1B-202ENST00000373474 EVX1P49640 407 aa12.97□□□□□ -0.33
LMX1B-202ENST00000373474 IKZF1Q13422 519 aa12.97□□□□□ -0.33
LMX1B-202ENST00000373474 DOC2BQ14184 412 aa12.97□□□□□ -0.33
LMX1B-202ENST00000373474 CTF1Q16619 201 aa12.97□□□□□ -0.33
LMX1B-202ENST00000373474 OR5D18Q8NGL1 313 aa12.97□□□□□ -0.33
LMX1B-202ENST00000373474 CORO2AQ92828 525 aa12.97□□□□□ -0.33
LMX1B-202ENST00000373474 TPPP3Q9BW30 176 aa12.97□□□□□ -0.33
LMX1B-202ENST00000373474 TAS2R4Q9NYW5 299 aa12.97□□□□□ -0.33
LMX1B-202ENST00000373474 DHCR7Q9UBM7 475 aaKnown RBP12.97□□□□□ -0.33
LMX1B-202ENST00000373474 GPR160Q9UJ42 338 aa12.97□□□□□ -0.33
LMX1B-202ENST00000373474 RFPL4AA6NLU0 287 aa12.97□□□□□ -0.33
LMX1B-202ENST00000373474 RFPL4AL1F8VTS6 287 aa12.97□□□□□ -0.33
LMX1B-202ENST00000373474 PHOX2AO14813 284 aa12.97□□□□□ -0.33
LMX1B-202ENST00000373474 YKT6O15498 198 aa12.97□□□□□ -0.33
LMX1B-202ENST00000373474 TUSC2O75896 110 aa12.97□□□□□ -0.33
LMX1B-202ENST00000373474 SDHAP31040 664 aa12.97□□□□□ -0.33
LMX1B-202ENST00000373474 MAP2K6P52564 334 aa12.97□□□□□ -0.33
LMX1B-202ENST00000373474 CCDC74BQ96LY2 380 aa12.97□□□□□ -0.33
LMX1B-202ENST00000373474 FAM173AQ9BQD7 235 aa12.97□□□□□ -0.33
LMX1B-202ENST00000373474 PIGQQ9BRB3 760 aa12.97□□□□□ -0.33
LMX1B-202ENST00000373474 PLEKHA2Q9HB19 425 aa12.97□□□□□ -0.33
LMX1B-202ENST00000373474 TBC1D29Q9UFV1 150 aa12.97□□□□□ -0.33
LMX1B-202ENST00000373474 TPOP07202 933 aa12.97□□□□□ -0.33
LMX1B-202ENST00000373474 GABRA2P47869 451 aa12.97□□□□□ -0.33
LMX1B-202ENST00000373474 HSF1Q00613 529 aa12.97□□□□□ -0.33
LMX1B-202ENST00000373474 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.97□□□□□ -0.33
LMX1B-202ENST00000373474 PRAMEF20Q5VT98 475 aa12.97□□□□□ -0.33
LMX1B-202ENST00000373474 SYS1Q8N2H4 156 aa12.97□□□□□ -0.33
LMX1B-202ENST00000373474 ZNF680Q8NEM1 530 aa12.97□□□□□ -0.33
LMX1B-202ENST00000373474 M1APQ8TC57 530 aa12.97□□□□□ -0.33
LMX1B-202ENST00000373474 ATF6BQ99941 703 aa12.97□□□□□ -0.33
LMX1B-202ENST00000373474 OBP2BQ9NPH6 170 aa12.97□□□□□ -0.33
LMX1B-202ENST00000373474 CGGBP1Q9UFW8 167 aaPredicted RBP12.97□□□□□ -0.33
LMX1B-202ENST00000373474 SNRPGP15A8MWD9 76 aa12.96□□□□□ -0.33
LMX1B-202ENST00000373474 PEX11BO96011 259 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms