RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 ANKRD61A6NGH8 418 aa13.34□□□□□ -0.27
NDC1-201ENST00000371429 NRASP01111 189 aa13.34□□□□□ -0.27
NDC1-201ENST00000371429 PIPP12273 146 aaPredicted RBP13.34□□□□□ -0.27
NDC1-201ENST00000371429 KITLGP21583 273 aa13.34□□□□□ -0.27
NDC1-201ENST00000371429 ETV6P41212 452 aa13.34□□□□□ -0.27
NDC1-201ENST00000371429 HOXA1P49639 335 aaPredicted RBP13.34□□□□□ -0.27
NDC1-201ENST00000371429 ELP2Q6IA86 826 aa13.34□□□□□ -0.27
NDC1-201ENST00000371429 OR52W1Q6IF63 320 aa13.34□□□□□ -0.27
NDC1-201ENST00000371429 LSRQ86X29 649 aaPredicted RBP13.34□□□□□ -0.27
NDC1-201ENST00000371429 ZNF573Q86YE8 665 aa13.34□□□□□ -0.27
NDC1-201ENST00000371429 GPR87Q9BY21 358 aa13.34□□□□□ -0.27
NDC1-201ENST00000371429 PSMB1P20618 241 aaKnown RBP13.34□□□□□ -0.27
NDC1-201ENST00000371429 RRAS2P62070 204 aaPredicted RBP13.34□□□□□ -0.27
NDC1-201ENST00000371429 LYPD4Q6UWN0 246 aa13.34□□□□□ -0.27
NDC1-201ENST00000371429 ST7LQ8TDW4 575 aa13.34□□□□□ -0.27
NDC1-201ENST00000371429 KCNJ15Q99712 375 aa13.34□□□□□ -0.27
NDC1-201ENST00000371429 GLTPQ9NZD2 209 aa13.34□□□□□ -0.27
NDC1-201ENST00000371429 FAM186AA6NE01 2351 aa13.34□□□□□ -0.27
NDC1-201ENST00000371429 ZAR1LA6NP61 321 aa13.34□□□□□ -0.27
NDC1-201ENST00000371429 TFAP2AP05549 437 aa13.34□□□□□ -0.27
NDC1-201ENST00000371429 MFGE8Q08431 387 aaPredicted RBP13.34□□□□□ -0.27
NDC1-201ENST00000371429 RNLSQ5VYX0 342 aa13.34□□□□□ -0.27
NDC1-201ENST00000371429 ANKRD34AQ69YU3 496 aa13.34□□□□□ -0.27
NDC1-201ENST00000371429 PTTG3PQ9NZH4 202 aa13.34□□□□□ -0.27
NDC1-201ENST00000371429 KIF25Q9UIL4 384 aa13.34□□□□□ -0.27
NDC1-201ENST00000371429 IFNA10P01566 189 aa13.33□□□□□ -0.27
NDC1-201ENST00000371429 RAF1P04049 648 aa13.33□□□□□ -0.27
NDC1-201ENST00000371429 BMP5P22003 454 aa13.33□□□□□ -0.27
NDC1-201ENST00000371429 ISL1P61371 349 aa13.33□□□□□ -0.27
NDC1-201ENST00000371429 SRPXP78539 464 aa13.33□□□□□ -0.27
NDC1-201ENST00000371429 STEAP1BQ6NZ63 245 aa13.33□□□□□ -0.27
NDC1-201ENST00000371429 GCNT2Q8N0V5 402 aa13.33□□□□□ -0.27
NDC1-201ENST00000371429 OR56B4Q8NH76 319 aa13.33□□□□□ -0.27
NDC1-201ENST00000371429 CA5BP1Q8WTZ4 195 aa13.33□□□□□ -0.27
NDC1-201ENST00000371429 APOBEC4Q8WW27 367 aaKnown RBP13.33□□□□□ -0.27
NDC1-201ENST00000371429 FOXB1Q99853 325 aa13.33□□□□□ -0.27
NDC1-201ENST00000371429 NMNAT2Q9BZQ4 307 aa13.33□□□□□ -0.27
NDC1-201ENST00000371429 SH2D1BO14796 132 aa13.33□□□□□ -0.28
NDC1-201ENST00000371429 CLEC2LP0C7M8 214 aa13.33□□□□□ -0.28
NDC1-201ENST00000371429 ETV1P50549 477 aa13.33□□□□□ -0.28
NDC1-201ENST00000371429 PCBP4P57723 403 aaKnown RBP13.33□□□□□ -0.28
NDC1-201ENST00000371429 RGS7BPQ6MZT1 257 aaPredicted RBP13.33□□□□□ -0.28
NDC1-201ENST00000371429 OR13F1Q8NGS4 319 aa13.33□□□□□ -0.28
NDC1-201ENST00000371429 HMGCLL1Q8TB92 370 aa13.33□□□□□ -0.28
NDC1-201ENST00000371429 FBXO17Q96EF6 278 aa13.33□□□□□ -0.28
NDC1-201ENST00000371429 GDF15Q99988 308 aa13.33□□□□□ -0.28
NDC1-201ENST00000371429 ZCCHC4Q9H5U6 513 aa13.33□□□□□ -0.28
NDC1-201ENST00000371429 C1orf123Q9NWV4 160 aa13.33□□□□□ -0.28
NDC1-201ENST00000371429 TCFL5Q9UL49 500 aa13.33□□□□□ -0.28
NDC1-201ENST00000371429 TRIP12Q14669 1992 aaPredicted RBP13.33□□□□□ -0.28
NDC1-201ENST00000371429 TRIM64CA6NLI5 447 aa13.33□□□□□ -0.28
NDC1-201ENST00000371429 ZNF117Q03924 483 aa13.33□□□□□ -0.28
NDC1-201ENST00000371429 NLRC3Q7RTR2 1065 aa13.33□□□□□ -0.28
NDC1-201ENST00000371429 OR10K1Q8NGX5 313 aa13.33□□□□□ -0.28
NDC1-201ENST00000371429 MAFIPQ8WZ33 124 aa13.33□□□□□ -0.28
NDC1-201ENST00000371429 ANKRD9Q96BM1 317 aaPredicted RBP13.33□□□□□ -0.28
NDC1-201ENST00000371429 WDR34Q96EX3 536 aa13.33□□□□□ -0.28
NDC1-201ENST00000371429 SIGLEC11Q96RL6 698 aa13.33□□□□□ -0.28
NDC1-201ENST00000371429 ADAMTSL1Q8N6G6 1762 aa13.33□□□□□ -0.28
NDC1-201ENST00000371429 APOC3P02656 99 aa13.33□□□□□ -0.28
NDC1-201ENST00000371429 LIPAP38571 399 aa13.33□□□□□ -0.28
NDC1-201ENST00000371429 ACSM1Q08AH1 577 aa13.33□□□□□ -0.28
NDC1-201ENST00000371429 KCNJ8Q15842 424 aa13.33□□□□□ -0.28
NDC1-201ENST00000371429 SYT6Q5T7P8 510 aaPredicted RBP13.33□□□□□ -0.28
NDC1-201ENST00000371429 OTPQ5XKR4 325 aa13.33□□□□□ -0.28
NDC1-201ENST00000371429 OGFOD3Q6PK18 319 aa13.33□□□□□ -0.28
NDC1-201ENST00000371429 RDH5Q92781 318 aa13.33□□□□□ -0.28
NDC1-201ENST00000371429 REEP6Q96HR9 211 aa13.33□□□□□ -0.28
NDC1-201ENST00000371429 SLCO1B1Q9Y6L6 691 aa13.33□□□□□ -0.28
NDC1-201ENST00000371429 TPPPO94811 219 aa13.32□□□□□ -0.28
NDC1-201ENST00000371429 CNIH1O95406 144 aa13.32□□□□□ -0.28
NDC1-201ENST00000371429 APEHP13798 732 aaKnown RBP13.32□□□□□ -0.28
NDC1-201ENST00000371429 APEX1P27695 318 aaKnown RBP13.32□□□□□ -0.28
NDC1-201ENST00000371429 KTI12Q96EK9 354 aaPredicted RBP13.32□□□□□ -0.28
NDC1-201ENST00000371429 NECAP2Q9NVZ3 263 aa13.32□□□□□ -0.28
NDC1-201ENST00000371429 GDF2Q9UK05 429 aaPredicted RBP13.32□□□□□ -0.28
NDC1-201ENST00000371429 ZNF225Q9UK10 706 aa13.32□□□□□ -0.28
NDC1-201ENST00000371429 MSTNO14793 375 aa13.32□□□□□ -0.28
NDC1-201ENST00000371429 SPINT1O43278 529 aa13.32□□□□□ -0.28
NDC1-201ENST00000371429 RPA2P15927 270 aa13.32□□□□□ -0.28
NDC1-201ENST00000371429 RAB4BP61018 213 aa13.32□□□□□ -0.28
NDC1-201ENST00000371429 CLPPQ16740 277 aaPredicted RBP13.32□□□□□ -0.28
NDC1-201ENST00000371429 PCK2Q16822 640 aa13.32□□□□□ -0.28
NDC1-201ENST00000371429 C16orf47Q6ZP98 133 aaPredicted RBP13.32□□□□□ -0.28
NDC1-201ENST00000371429 AKR7LQ8NHP1 331 aa13.32□□□□□ -0.28
NDC1-201ENST00000371429 BORCS7Q96B45 105 aa13.32□□□□□ -0.28
NDC1-201ENST00000371429 MEIOCA2RUB1 952 aa13.32□□□□□ -0.28
NDC1-201ENST00000371429 TBX19O60806 448 aa13.32□□□□□ -0.28
NDC1-201ENST00000371429 APOA2P02652 100 aa13.32□□□□□ -0.28
NDC1-201ENST00000371429 RAE1P78406 368 aaKnown RBP13.32□□□□□ -0.28
NDC1-201ENST00000371429 EGR3Q06889 387 aa13.32□□□□□ -0.28
NDC1-201ENST00000371429 RNPS1Q15287 305 aaKnown RBP13.32□□□□□ -0.28
NDC1-201ENST00000371429 ELFN2Q5R3F8 820 aa13.32□□□□□ -0.28
NDC1-201ENST00000371429 STEAP3Q658P3 488 aa13.32□□□□□ -0.28
NDC1-201ENST00000371429 PMS2CLQ68D20 193 aa13.32□□□□□ -0.28
NDC1-201ENST00000371429 ZNF425Q6IV72 752 aa13.32□□□□□ -0.28
NDC1-201ENST00000371429 RDH10Q8IZV5 341 aa13.32□□□□□ -0.28
NDC1-201ENST00000371429 C3orf49Q96BT1 292 aa13.32□□□□□ -0.28
NDC1-201ENST00000371429 B9D1Q9UPM9 204 aa13.32□□□□□ -0.28
NDC1-201ENST00000371429 FITM1A5D6W6 292 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms