RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 AKR7LQ8NHP1 331 aa10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 ASB5Q8WWX0 329 aa10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 AQP10Q96PS8 301 aa10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 CHRDQ9H2X0 955 aa10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 TUBA4BQ9H853 241 aa10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 ATG2AQ2TAZ0 1938 aa10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 CXorf65A6NEN9 183 aa10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 AP4M1O00189 453 aa10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 DUS4LO95620 317 aaKnown RBP10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 CCKBRP32239 447 aa10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 UCP2P55851 309 aa10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 SSTP61278 116 aa10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 AIMP2Q13155 320 aaKnown RBP10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 GLYATL3Q5SZD4 288 aa10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 TMEM225Q6GV28 225 aa10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 ZNF383Q8NA42 475 aa10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 OR4D6Q8NGJ1 314 aa10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 OR2L8Q8NGY9 312 aa10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 SGK3Q96BR1 496 aa10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 PDE7BQ9NP56 450 aa10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 COMMD9Q9P000 198 aa10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 OR1A2Q9Y585 309 aa10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 A0A087WUJ7 227 aa10.46□□□□□ -0.73
SMARCA1-201ENST00000371121 A0A1W2PPE2 198 aa10.46□□□□□ -0.73
SMARCA1-201ENST00000371121 RAB27BO00194 218 aa10.46□□□□□ -0.73
SMARCA1-201ENST00000371121 OR10H2O60403 315 aa10.46□□□□□ -0.73
SMARCA1-201ENST00000371121 ZNF217O75362 1048 aa10.46□□□□□ -0.73
SMARCA1-201ENST00000371121 S1PR1P21453 382 aa10.46□□□□□ -0.73
SMARCA1-201ENST00000371121 RIDAP52758 137 aaKnown RBP10.46□□□□□ -0.73
SMARCA1-201ENST00000371121 QRFPP83859 136 aa10.46□□□□□ -0.73
SMARCA1-201ENST00000371121 TOMM20Q15388 145 aa10.46□□□□□ -0.73
SMARCA1-201ENST00000371121 RAB11BQ15907 218 aa10.46□□□□□ -0.73
SMARCA1-201ENST00000371121 FAM78AQ5JUQ0 283 aa10.46□□□□□ -0.73
SMARCA1-201ENST00000371121 TEX30Q5JUR7 227 aa10.46□□□□□ -0.73
SMARCA1-201ENST00000371121 OR2A2Q6IF42 318 aa10.46□□□□□ -0.73
SMARCA1-201ENST00000371121 ZNF627Q7L945 461 aa10.46□□□□□ -0.73
SMARCA1-201ENST00000371121 CASTOR1Q8WTX7 329 aa10.46□□□□□ -0.73
SMARCA1-201ENST00000371121 SAT2Q96F10 170 aaPredicted RBP10.46□□□□□ -0.73
SMARCA1-201ENST00000371121 C5orf66Q9H5L9 145 aa10.46□□□□□ -0.73
SMARCA1-201ENST00000371121 SRSF10O75494 262 aaKnown RBP10.46□□□□□ -0.73
SMARCA1-201ENST00000371121 EML2O95834 649 aa10.46□□□□□ -0.73
SMARCA1-201ENST00000371121 RPS2P15880 293 aaKnown RBP10.46□□□□□ -0.73
SMARCA1-201ENST00000371121 HRH1P35367 487 aa10.46□□□□□ -0.73
SMARCA1-201ENST00000371121 HSD17B2P37059 387 aa10.46□□□□□ -0.73
SMARCA1-201ENST00000371121 TSFMP43897 325 aaKnown RBP10.46□□□□□ -0.73
SMARCA1-201ENST00000371121 ISXQ2M1V0 245 aa10.46□□□□□ -0.73
SMARCA1-201ENST00000371121 ANKRD55Q3KP44 614 aa10.46□□□□□ -0.73
SMARCA1-201ENST00000371121 GFI1BQ5VTD9 330 aa10.46□□□□□ -0.73
SMARCA1-201ENST00000371121 ZNF550Q7Z398 422 aa10.46□□□□□ -0.73
SMARCA1-201ENST00000371121 SLC39A7Q92504 469 aa10.46□□□□□ -0.73
SMARCA1-201ENST00000371121 FOXN4Q96NZ1 517 aa10.46□□□□□ -0.73
SMARCA1-201ENST00000371121 GNRHR2Q96P88 292 aa10.46□□□□□ -0.73
SMARCA1-201ENST00000371121 RPS10P5Q9NQ39 176 aa10.46□□□□□ -0.73
SMARCA1-201ENST00000371121 SDHAF3Q9NRP4 125 aa10.46□□□□□ -0.73
SMARCA1-201ENST00000371121 TAS2R4Q9NYW5 299 aa10.46□□□□□ -0.73
SMARCA1-201ENST00000371121 UPB1Q9UBR1 384 aa10.46□□□□□ -0.73
SMARCA1-201ENST00000371121 PILRAQ9UKJ1 303 aa10.46□□□□□ -0.73
SMARCA1-201ENST00000371121 WNT6Q9Y6F9 365 aa10.46□□□□□ -0.73
SMARCA1-201ENST00000371121 CDC40O60508 579 aaKnown RBP eCLIP10.46□□□□□ -0.74
SMARCA1-201ENST00000371121 AGR2O95994 175 aa10.46□□□□□ -0.74
SMARCA1-201ENST00000371121 S100A9P06702 114 aaKnown RBP10.46□□□□□ -0.74
SMARCA1-201ENST00000371121 SFTPBP07988 381 aa10.46□□□□□ -0.74
SMARCA1-201ENST00000371121 HOXB5P09067 269 aa10.46□□□□□ -0.74
SMARCA1-201ENST00000371121 NME1P15531 152 aaKnown RBP10.46□□□□□ -0.74
SMARCA1-201ENST00000371121 HOXA5P20719 270 aa10.46□□□□□ -0.74
SMARCA1-201ENST00000371121 TACR3P29371 465 aa10.46□□□□□ -0.74
SMARCA1-201ENST00000371121 GABRA3P34903 492 aa10.46□□□□□ -0.74
SMARCA1-201ENST00000371121 ARRB1P49407 418 aaPredicted RBP10.46□□□□□ -0.74
SMARCA1-201ENST00000371121 FBXO42Q6P3S6 717 aa10.46□□□□□ -0.74
SMARCA1-201ENST00000371121 ADAD1Q96M93 576 aaKnown RBP10.46□□□□□ -0.74
SMARCA1-201ENST00000371121 DCBLD2Q96PD2 775 aa10.46□□□□□ -0.74
SMARCA1-201ENST00000371121 TSPAN32Q96QS1 320 aa10.46□□□□□ -0.74
SMARCA1-201ENST00000371121 RAB33BQ9H082 229 aa10.46□□□□□ -0.74
SMARCA1-201ENST00000371121 TMPRSS5Q9H3S3 457 aa10.46□□□□□ -0.74
SMARCA1-201ENST00000371121 SRA1Q9HD15 236 aaKnown RBP10.46□□□□□ -0.74
SMARCA1-201ENST00000371121 DAPP1Q9UN19 280 aa10.46□□□□□ -0.74
SMARCA1-201ENST00000371121 HDGFL3Q9Y3E1 203 aa10.46□□□□□ -0.74
SMARCA1-201ENST00000371121 OTOL1A6NHN0 477 aaPredicted RBP10.45□□□□□ -0.74
SMARCA1-201ENST00000371121 TMEM212A6NML5 194 aa10.45□□□□□ -0.74
SMARCA1-201ENST00000371121 CTSVO60911 334 aa10.45□□□□□ -0.74
SMARCA1-201ENST00000371121 AKR1C4P17516 323 aa10.45□□□□□ -0.74
SMARCA1-201ENST00000371121 PGDP52209 483 aa10.45□□□□□ -0.74
SMARCA1-201ENST00000371121 SLC25A1P53007 311 aa10.45□□□□□ -0.74
SMARCA1-201ENST00000371121 ADAMTSL4Q6UY14 1074 aa10.45□□□□□ -0.74
SMARCA1-201ENST00000371121 FJX1Q86VR8 437 aa10.45□□□□□ -0.74
SMARCA1-201ENST00000371121 SLC43A2Q8N370 569 aa10.45□□□□□ -0.74
SMARCA1-201ENST00000371121 COX18Q8N8Q8 333 aa10.45□□□□□ -0.74
SMARCA1-201ENST00000371121 WDSUB1Q8N9V3 476 aa10.45□□□□□ -0.74
SMARCA1-201ENST00000371121 OR5T3Q8NGG3 340 aa10.45□□□□□ -0.74
SMARCA1-201ENST00000371121 ASB17Q8WXJ9 295 aa10.45□□□□□ -0.74
SMARCA1-201ENST00000371121 TRIM43Q96BQ3 446 aaPredicted RBP10.45□□□□□ -0.74
SMARCA1-201ENST00000371121 TM4SF19Q96DZ7 209 aa10.45□□□□□ -0.74
SMARCA1-201ENST00000371121 BSCL2Q96G97 398 aaPredicted RBP10.45□□□□□ -0.74
SMARCA1-201ENST00000371121 SULT4A1Q9BR01 284 aa10.45□□□□□ -0.74
SMARCA1-201ENST00000371121 NUDT9Q9BW91 350 aa10.45□□□□□ -0.74
SMARCA1-201ENST00000371121 PARP12Q9H0J9 701 aaKnown RBP10.45□□□□□ -0.74
SMARCA1-201ENST00000371121 AMDHD2Q9Y303 409 aa10.45□□□□□ -0.74
SMARCA1-201ENST00000371121 FREM2Q5SZK8 3169 aa10.45□□□□□ -0.74
SMARCA1-201ENST00000371121 C13orf42A0A1B0GVH6 325 aa10.45□□□□□ -0.74
SMARCA1-201ENST00000371121 WRBO00258 174 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms