RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 TFP02787 698 aa16.16■□□□□ 0.18
CKS1B-203ENST00000368439 MRPS11P82912 194 aaKnown RBP16.16■□□□□ 0.18
CKS1B-203ENST00000368439 GLO1Q04760 184 aa16.16■□□□□ 0.18
CKS1B-203ENST00000368439 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.16■□□□□ 0.18
CKS1B-203ENST00000368439 TRIP10Q15642 601 aa16.16■□□□□ 0.18
CKS1B-203ENST00000368439 CLEC12AQ5QGZ9 265 aa16.16■□□□□ 0.18
CKS1B-203ENST00000368439 SLC35F1Q5T1Q4 408 aa16.16■□□□□ 0.18
CKS1B-203ENST00000368439 UNQ6126/PRO20091Q6UXV3 157 aa16.16■□□□□ 0.18
CKS1B-203ENST00000368439 AQP12AQ8IXF9 295 aa16.16■□□□□ 0.18
CKS1B-203ENST00000368439 AQP11Q8NBQ7 271 aa16.16■□□□□ 0.18
CKS1B-203ENST00000368439 OR52E2Q8NGJ4 325 aa16.16■□□□□ 0.18
CKS1B-203ENST00000368439 SLC7A6Q92536 515 aa16.16■□□□□ 0.18
CKS1B-203ENST00000368439 RDH5Q92781 318 aa16.16■□□□□ 0.18
CKS1B-203ENST00000368439 LRGUKQ96M69 825 aa16.16■□□□□ 0.18
CKS1B-203ENST00000368439 CHID1Q9BWS9 393 aa16.16■□□□□ 0.18
CKS1B-203ENST00000368439 DGCR6LQ9BY27 220 aa16.16■□□□□ 0.18
CKS1B-203ENST00000368439 REEP1Q9H902 201 aa16.16■□□□□ 0.18
CKS1B-203ENST00000368439 ELOVL3Q9HB03 270 aa16.16■□□□□ 0.18
CKS1B-203ENST00000368439 TBCCD1Q9NVR7 557 aa16.16■□□□□ 0.18
CKS1B-203ENST00000368439 PLEK2Q9NYT0 353 aa16.16■□□□□ 0.18
CKS1B-203ENST00000368439 KLHL21Q9UJP4 597 aa16.16■□□□□ 0.18
CKS1B-203ENST00000368439 SAMHD1Q9Y3Z3 626 aaKnown RBP16.16■□□□□ 0.18
CKS1B-203ENST00000368439 LRP5LA4QPB2 252 aa16.15■□□□□ 0.18
CKS1B-203ENST00000368439 H3BSA7 217 aa16.15■□□□□ 0.18
CKS1B-203ENST00000368439 GYG2O15488 501 aa16.15■□□□□ 0.18
CKS1B-203ENST00000368439 ZNF16P17020 682 aaPredicted RBP16.15■□□□□ 0.18
CKS1B-203ENST00000368439 ACHEP22303 614 aa16.15■□□□□ 0.18
CKS1B-203ENST00000368439 NOS3P29474 1203 aa16.15■□□□□ 0.18
CKS1B-203ENST00000368439 IL2RGP31785 369 aa16.15■□□□□ 0.18
CKS1B-203ENST00000368439 GZMKP49863 264 aa16.15■□□□□ 0.18
CKS1B-203ENST00000368439 MOGQ16653 247 aa16.15■□□□□ 0.18
CKS1B-203ENST00000368439 DNAL1Q4LDG9 190 aa16.15■□□□□ 0.18
CKS1B-203ENST00000368439 HIPK1Q86Z02 1210 aa16.15■□□□□ 0.18
CKS1B-203ENST00000368439 OR1F12Q8NHA8 337 aa16.15■□□□□ 0.18
CKS1B-203ENST00000368439 SNX33Q8WV41 574 aa16.15■□□□□ 0.18
CKS1B-203ENST00000368439 CANT1Q8WVQ1 401 aa16.15■□□□□ 0.18
CKS1B-203ENST00000368439 MSI2Q96DH6 328 aaKnown RBP16.15■□□□□ 0.18
CKS1B-203ENST00000368439 CHODLQ9H9P2 273 aa16.15■□□□□ 0.18
CKS1B-203ENST00000368439 ATPIF1Q9UII2 106 aa16.15■□□□□ 0.18
CKS1B-203ENST00000368439 ABHD16AO95870 558 aa16.14■□□□□ 0.17
CKS1B-203ENST00000368439 GCH1P30793 250 aa16.14■□□□□ 0.17
CKS1B-203ENST00000368439 ARHGDIAP52565 204 aa16.14■□□□□ 0.17
CKS1B-203ENST00000368439 CCL8P80075 99 aa16.14■□□□□ 0.17
CKS1B-203ENST00000368439 COX10Q12887 443 aa16.14■□□□□ 0.17
CKS1B-203ENST00000368439 RSPO1Q2MKA7 263 aaPredicted RBP16.14■□□□□ 0.17
CKS1B-203ENST00000368439 PCGF3Q3KNV8 242 aa16.14■□□□□ 0.17
CKS1B-203ENST00000368439 TMEM154Q6P9G4 183 aa16.14■□□□□ 0.17
CKS1B-203ENST00000368439 TMEM179BQ7Z7N9 219 aa16.14■□□□□ 0.17
CKS1B-203ENST00000368439 LNX2Q8N448 690 aa16.14■□□□□ 0.17
CKS1B-203ENST00000368439 OR52L1Q8NGH7 329 aa16.14■□□□□ 0.17
CKS1B-203ENST00000368439 OR4Q3Q8NH05 313 aa16.14■□□□□ 0.17
CKS1B-203ENST00000368439 ZNRF4Q8WWF5 429 aa16.14■□□□□ 0.17
CKS1B-203ENST00000368439 ZNF275Q9NSD4 429 aaPredicted RBP16.14■□□□□ 0.17
CKS1B-203ENST00000368439 MRPL22Q9NWU5 206 aaKnown RBP16.14■□□□□ 0.17
CKS1B-203ENST00000368439 TMEM160Q9NX00 188 aa16.14■□□□□ 0.17
CKS1B-203ENST00000368439 TANC2Q9HCD6 1990 aa16.14■□□□□ 0.17
CKS1B-203ENST00000368439 DNHD1Q96M86 4753 aa16.13■□□□□ 0.17
CKS1B-203ENST00000368439 DHRS12A0PJE2 317 aa16.13■□□□□ 0.17
CKS1B-203ENST00000368439 ZSCAN5BA6NJL1 495 aa16.13■□□□□ 0.17
CKS1B-203ENST00000368439 CST1P01037 141 aa16.13■□□□□ 0.17
CKS1B-203ENST00000368439 IGHV1-46P01743 117 aa16.13■□□□□ 0.17
CKS1B-203ENST00000368439 ADH4P08319 380 aa16.13■□□□□ 0.17
CKS1B-203ENST00000368439 DBHP09172 617 aa16.13■□□□□ 0.17
CKS1B-203ENST00000368439 GGT2P36268 569 aa16.13■□□□□ 0.17
CKS1B-203ENST00000368439 CENPAP49450 140 aa16.13■□□□□ 0.17
CKS1B-203ENST00000368439 CHN2P52757 468 aa16.13■□□□□ 0.17
CKS1B-203ENST00000368439 TEKQ02763 1124 aa16.13■□□□□ 0.17
CKS1B-203ENST00000368439 BNIP1Q12981 228 aa16.13■□□□□ 0.17
CKS1B-203ENST00000368439 PSG7Q13046 419 aa16.13■□□□□ 0.17
CKS1B-203ENST00000368439 GK3PQ14409 553 aa16.13■□□□□ 0.17
CKS1B-203ENST00000368439 KRTAP27-1Q3LI81 207 aa16.13■□□□□ 0.17
CKS1B-203ENST00000368439 SLC18B1Q6NT16 456 aa16.13■□□□□ 0.17
CKS1B-203ENST00000368439 CORO6Q6QEF8 472 aa16.13■□□□□ 0.17
CKS1B-203ENST00000368439 ARL9Q6T311 187 aa16.13■□□□□ 0.17
CKS1B-203ENST00000368439 CD300LDQ6UXZ3 194 aa16.13■□□□□ 0.17
CKS1B-203ENST00000368439 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.13■□□□□ 0.17
CKS1B-203ENST00000368439 GJC3Q8NFK1 279 aa16.13■□□□□ 0.17
CKS1B-203ENST00000368439 OR10G2Q8NGC3 310 aa16.13■□□□□ 0.17
CKS1B-203ENST00000368439 C1orf159Q96HA4 380 aa16.13■□□□□ 0.17
CKS1B-203ENST00000368439 NIPSNAP1Q9BPW8 284 aa16.13■□□□□ 0.17
CKS1B-203ENST00000368439 POMPQ9Y244 141 aa16.13■□□□□ 0.17
CKS1B-203ENST00000368439 STARD10Q9Y365 291 aa16.13■□□□□ 0.17
CKS1B-203ENST00000368439 GRIP1Q9Y3R0 1128 aa16.13■□□□□ 0.17
CKS1B-203ENST00000368439 GSTM3P21266 225 aa16.12■□□□□ 0.17
CKS1B-203ENST00000368439 TUBG1P23258 451 aa16.12■□□□□ 0.17
CKS1B-203ENST00000368439 CRYBB2P43320 205 aa16.12■□□□□ 0.17
CKS1B-203ENST00000368439 ZNF81P51508 661 aa16.12■□□□□ 0.17
CKS1B-203ENST00000368439 TMEM33P57088 247 aa16.12■□□□□ 0.17
CKS1B-203ENST00000368439 CFAP77Q6ZQR2 320 aa16.12■□□□□ 0.17
CKS1B-203ENST00000368439 LINC00346Q8IVM7 164 aa16.12■□□□□ 0.17
CKS1B-203ENST00000368439 CYB561A3Q8NBI2 242 aa16.12■□□□□ 0.17
CKS1B-203ENST00000368439 SLC37A3Q8NCC5 494 aa16.12■□□□□ 0.17
CKS1B-203ENST00000368439 HPS1Q92902 700 aa16.12■□□□□ 0.17
CKS1B-203ENST00000368439 DCLRE1CQ96SD1 692 aaKnown RBP16.12■□□□□ 0.17
CKS1B-203ENST00000368439 COQ7Q99807 217 aa16.12■□□□□ 0.17
CKS1B-203ENST00000368439 RBM4Q9BWF3 364 aaKnown RBP16.12■□□□□ 0.17
CKS1B-203ENST00000368439 TSSK6Q9BXA6 273 aa16.12■□□□□ 0.17
CKS1B-203ENST00000368439 CADM1Q9BY67 442 aaKnown RBP16.12■□□□□ 0.17
CKS1B-203ENST00000368439 PNRC2Q9NPJ4 139 aaKnown RBP16.12■□□□□ 0.17
CKS1B-203ENST00000368439 TUBG2Q9NRH3 451 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 175.6 ms