RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 GHRLQ9UBU3 117 aa10.49□□□□□ -0.73
SYNE1-204ENST00000367248 TRIP12Q14669 1992 aaPredicted RBP10.49□□□□□ -0.73
SYNE1-204ENST00000367248 A0A0U1RQK1 487 aa10.49□□□□□ -0.73
SYNE1-204ENST00000367248 SIRPB1O00241 398 aa10.49□□□□□ -0.73
SYNE1-204ENST00000367248 ABCD4O14678 606 aa10.49□□□□□ -0.73
SYNE1-204ENST00000367248 IFNA1P01562 189 aa10.49□□□□□ -0.73
SYNE1-204ENST00000367248 JUNBP17275 347 aaPredicted RBP10.49□□□□□ -0.73
SYNE1-204ENST00000367248 DLX5P56178 289 aa10.49□□□□□ -0.73
SYNE1-204ENST00000367248 GALEQ14376 348 aa10.49□□□□□ -0.73
SYNE1-204ENST00000367248 OR56B2PQ8NGI1 322 aa10.49□□□□□ -0.73
SYNE1-204ENST00000367248 DUSP21Q9H596 190 aa10.49□□□□□ -0.73
SYNE1-204ENST00000367248 SIAEQ9HAT2 523 aa10.49□□□□□ -0.73
SYNE1-204ENST00000367248 TRABD2BA6NFA1 517 aa10.48□□□□□ -0.73
SYNE1-204ENST00000367248 DEGS1O15121 323 aa10.48□□□□□ -0.73
SYNE1-204ENST00000367248 TFP02787 698 aa10.48□□□□□ -0.73
SYNE1-204ENST00000367248 SP9P0CG40 484 aa10.48□□□□□ -0.73
SYNE1-204ENST00000367248 GLRA1P23415 457 aa10.48□□□□□ -0.73
SYNE1-204ENST00000367248 APEX1P27695 318 aaKnown RBP10.48□□□□□ -0.73
SYNE1-204ENST00000367248 GDNFP39905 211 aa10.48□□□□□ -0.73
SYNE1-204ENST00000367248 DESI1Q6ICB0 168 aa10.48□□□□□ -0.73
SYNE1-204ENST00000367248 OR4M1Q8NGD0 313 aa10.48□□□□□ -0.73
SYNE1-204ENST00000367248 OR10K1Q8NGX5 313 aa10.48□□□□□ -0.73
SYNE1-204ENST00000367248 OR51E1Q8TCB6 317 aa10.48□□□□□ -0.73
SYNE1-204ENST00000367248 FGF11Q92914 225 aa10.48□□□□□ -0.73
SYNE1-204ENST00000367248 CCL21O00585 134 aa10.48□□□□□ -0.73
SYNE1-204ENST00000367248 HNRNPFP52597 415 aaKnown RBP10.48□□□□□ -0.73
SYNE1-204ENST00000367248 ZNF117Q03924 483 aa10.48□□□□□ -0.73
SYNE1-204ENST00000367248 SFTPA2Q8IWL1 248 aa10.48□□□□□ -0.73
SYNE1-204ENST00000367248 OR10X1Q8NGY0 326 aa10.48□□□□□ -0.73
SYNE1-204ENST00000367248 RNF128Q8TEB7 428 aa10.48□□□□□ -0.73
SYNE1-204ENST00000367248 MOB1AQ9H8S9 216 aa10.48□□□□□ -0.73
SYNE1-204ENST00000367248 A0A1W2PRD5 423 aa10.48□□□□□ -0.73
SYNE1-204ENST00000367248 A0A1W2PRF3 423 aa10.48□□□□□ -0.73
SYNE1-204ENST00000367248 A0A1W2PRM7 423 aa10.48□□□□□ -0.73
SYNE1-204ENST00000367248 GREM1O60565 184 aa10.48□□□□□ -0.73
SYNE1-204ENST00000367248 HOXA1P49639 335 aaPredicted RBP10.48□□□□□ -0.73
SYNE1-204ENST00000367248 AKR7LQ8NHP1 331 aa10.48□□□□□ -0.73
SYNE1-204ENST00000367248 SLC39A7Q92504 469 aa10.48□□□□□ -0.73
SYNE1-204ENST00000367248 PLA2G7Q13093 441 aa10.48□□□□□ -0.73
SYNE1-204ENST00000367248 PLPPR2Q96GM1 343 aa10.48□□□□□ -0.73
SYNE1-204ENST00000367248 RTL8AQ9BWD3 113 aa10.48□□□□□ -0.73
SYNE1-204ENST00000367248 CDCA4Q9BXL8 241 aa10.48□□□□□ -0.73
SYNE1-204ENST00000367248 S1PR5Q9H228 398 aa10.48□□□□□ -0.73
SYNE1-204ENST00000367248 KCNG2Q9UJ96 466 aa10.48□□□□□ -0.73
SYNE1-204ENST00000367248 A0A087WUJ7 227 aa10.48□□□□□ -0.73
SYNE1-204ENST00000367248 CHRM2P08172 466 aa10.48□□□□□ -0.73
SYNE1-204ENST00000367248 ARR3P36575 388 aa10.48□□□□□ -0.73
SYNE1-204ENST00000367248 RAB31Q13636 194 aa10.48□□□□□ -0.73
SYNE1-204ENST00000367248 PMS2CLQ68D20 193 aa10.48□□□□□ -0.73
SYNE1-204ENST00000367248 D2HGDHQ8N465 521 aa10.48□□□□□ -0.73
SYNE1-204ENST00000367248 OCSTAMPQ9BR26 566 aa10.48□□□□□ -0.73
SYNE1-204ENST00000367248 BARHL1Q9BZE3 327 aa10.48□□□□□ -0.73
SYNE1-204ENST00000367248 ZFP64Q9NPA5 681 aa10.48□□□□□ -0.73
SYNE1-204ENST00000367248 TREM2Q9NZC2 230 aa10.48□□□□□ -0.73
SYNE1-204ENST00000367248 ONECUT1Q9UBC0 465 aa10.48□□□□□ -0.73
SYNE1-204ENST00000367248 ASPDHA6ND91 283 aa10.48□□□□□ -0.73
SYNE1-204ENST00000367248 SNRPD2P62316 118 aaKnown RBP10.48□□□□□ -0.73
SYNE1-204ENST00000367248 RGS7BPQ6MZT1 257 aaPredicted RBP10.48□□□□□ -0.73
SYNE1-204ENST00000367248 UBAC2Q8NBM4 344 aa10.48□□□□□ -0.73
SYNE1-204ENST00000367248 OR1J1Q8NGS3 322 aa10.48□□□□□ -0.73
SYNE1-204ENST00000367248 OR2Y1Q8NGV0 311 aa10.48□□□□□ -0.73
SYNE1-204ENST00000367248 SNX18Q96RF0 628 aa10.48□□□□□ -0.73
SYNE1-204ENST00000367248 UBQLN2Q9UHD9 624 aa10.48□□□□□ -0.73
SYNE1-204ENST00000367248 SVILO95425 2214 aa10.47□□□□□ -0.73
SYNE1-204ENST00000367248 CABIN1Q9Y6J0 2220 aa10.47□□□□□ -0.73
SYNE1-204ENST00000367248 A0A0B4J2E0 115 aa10.47□□□□□ -0.73
SYNE1-204ENST00000367248 A0A1B0GX12 115 aa10.47□□□□□ -0.73
SYNE1-204ENST00000367248 ARPC5O15511 151 aa10.47□□□□□ -0.73
SYNE1-204ENST00000367248 PSMB1P20618 241 aaKnown RBP10.47□□□□□ -0.73
SYNE1-204ENST00000367248 CDAP32320 146 aa10.47□□□□□ -0.73
SYNE1-204ENST00000367248 SHBQ15464 509 aa10.47□□□□□ -0.73
SYNE1-204ENST00000367248 TGIF1Q15583 401 aa10.47□□□□□ -0.73
SYNE1-204ENST00000367248 JMJD6Q6NYC1 403 aaPredicted RBP10.47□□□□□ -0.73
SYNE1-204ENST00000367248 ANGPTL5Q86XS5 388 aa10.47□□□□□ -0.73
SYNE1-204ENST00000367248 LAX1Q8IWV1 398 aa10.47□□□□□ -0.73
SYNE1-204ENST00000367248 PHC2Q8IXK0 858 aa10.47□□□□□ -0.73
SYNE1-204ENST00000367248 ZNF679Q8IYX0 411 aa10.47□□□□□ -0.73
SYNE1-204ENST00000367248 CPNE4Q96A23 557 aaPredicted RBP10.47□□□□□ -0.73
SYNE1-204ENST00000367248 EIF5A2Q9GZV4 153 aaKnown RBP10.47□□□□□ -0.73
SYNE1-204ENST00000367248 ETV7Q9Y603 341 aa10.47□□□□□ -0.73
SYNE1-204ENST00000367248 MRPS18BQ9Y676 258 aaKnown RBP10.47□□□□□ -0.73
SYNE1-204ENST00000367248 COL11A2P13942 1736 aaPredicted RBP10.47□□□□□ -0.73
SYNE1-204ENST00000367248 ALDH3B2P48448 385 aa10.47□□□□□ -0.73
SYNE1-204ENST00000367248 SSTP61278 116 aa10.47□□□□□ -0.73
SYNE1-204ENST00000367248 RSPO4Q2I0M5 234 aaPredicted RBP10.47□□□□□ -0.73
SYNE1-204ENST00000367248 C6orf183Q5T699 404 aa10.47□□□□□ -0.73
SYNE1-204ENST00000367248 ELMOD3Q96FG2 381 aa10.47□□□□□ -0.73
SYNE1-204ENST00000367248 SIGLEC11Q96RL6 698 aa10.47□□□□□ -0.73
SYNE1-204ENST00000367248 ATF6BQ99941 703 aa10.47□□□□□ -0.73
SYNE1-204ENST00000367248 SMIM3Q9BZL3 60 aa10.47□□□□□ -0.73
SYNE1-204ENST00000367248 TCFL5Q9UL49 500 aa10.47□□□□□ -0.73
SYNE1-204ENST00000367248 RAF1P04049 648 aa10.47□□□□□ -0.73
SYNE1-204ENST00000367248 SELEP16581 610 aa10.47□□□□□ -0.73
SYNE1-204ENST00000367248 ID4P47928 161 aa10.47□□□□□ -0.73
SYNE1-204ENST00000367248 RBP2P50120 134 aa10.47□□□□□ -0.73
SYNE1-204ENST00000367248 UBE2IP63279 158 aaKnown RBP10.47□□□□□ -0.73
SYNE1-204ENST00000367248 MSMO1Q15800 293 aa10.47□□□□□ -0.73
SYNE1-204ENST00000367248 AGAP6Q5VW22 663 aa10.47□□□□□ -0.73
SYNE1-204ENST00000367248 APOOLQ6UXV4 268 aa10.47□□□□□ -0.73
SYNE1-204ENST00000367248 CCL17Q92583 94 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms