RNA–Protein interactions for RNA: ENST00000366862.9

FBXO28-201, Transcript of F-box protein 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FBXO28, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-201ENST00000366862 WWTR1Q9GZV5 400 aa14.34□□□□□ -0.11
FBXO28-201ENST00000366862 SIRT5Q9NXA8 310 aa14.34□□□□□ -0.11
FBXO28-201ENST00000366862 DSC1Q08554 894 aa14.34□□□□□ -0.11
FBXO28-201ENST00000366862 TMEM128Q5BJH2 165 aa14.34□□□□□ -0.11
FBXO28-201ENST00000366862 ZDHHC22Q8N966 263 aa14.34□□□□□ -0.11
FBXO28-201ENST00000366862 SLC38A9Q8NBW4 561 aa14.34□□□□□ -0.11
FBXO28-201ENST00000366862 GPX8Q8TED1 209 aa14.34□□□□□ -0.11
FBXO28-201ENST00000366862 STRADBQ9C0K7 418 aa14.34□□□□□ -0.11
FBXO28-201ENST00000366862 SLC17A5Q9NRA2 495 aa14.34□□□□□ -0.11
FBXO28-201ENST00000366862 PRAMEF26H0Y7S4 382 aa14.34□□□□□ -0.11
FBXO28-201ENST00000366862 CTNSO60931 367 aa14.34□□□□□ -0.11
FBXO28-201ENST00000366862 CLDN17P56750 224 aa14.34□□□□□ -0.11
FBXO28-201ENST00000366862 CATSPERDQ86XM0 798 aa14.34□□□□□ -0.11
FBXO28-201ENST00000366862 CXorf58Q96LI9 332 aa14.34□□□□□ -0.11
FBXO28-201ENST00000366862 CASD1Q96PB1 797 aa14.34□□□□□ -0.11
FBXO28-201ENST00000366862 SUCNR1Q9BXA5 334 aa14.34□□□□□ -0.11
FBXO28-201ENST00000366862 TM7SF3Q9NS93 570 aa14.34□□□□□ -0.11
FBXO28-201ENST00000366862 COA3Q9Y2R0 106 aaPredicted RBP14.34□□□□□ -0.11
FBXO28-201ENST00000366862 POMT1Q9Y6A1 747 aa14.34□□□□□ -0.11
FBXO28-201ENST00000366862 PRSS23O95084 383 aa14.34□□□□□ -0.11
FBXO28-201ENST00000366862 GSTP1P09211 210 aaKnown RBP14.34□□□□□ -0.11
FBXO28-201ENST00000366862 ZNF626Q68DY1 528 aa14.34□□□□□ -0.11
FBXO28-201ENST00000366862 LRRTM1Q86UE6 522 aa14.34□□□□□ -0.11
FBXO28-201ENST00000366862 OR4F5Q8NH21 305 aa14.34□□□□□ -0.11
FBXO28-201ENST00000366862 OR4F4Q96R69 305 aa14.34□□□□□ -0.11
FBXO28-201ENST00000366862 MCTS1Q9ULC4 181 aaKnown RBP14.34□□□□□ -0.11
FBXO28-201ENST00000366862 RPA2P15927 270 aa14.33□□□□□ -0.11
FBXO28-201ENST00000366862 SLC6A1P30531 599 aa14.33□□□□□ -0.11
FBXO28-201ENST00000366862 LIM2P55344 173 aa14.33□□□□□ -0.11
FBXO28-201ENST00000366862 SRYQ05066 204 aa14.33□□□□□ -0.11
FBXO28-201ENST00000366862 LCN15Q6UWW0 184 aa14.33□□□□□ -0.11
FBXO28-201ENST00000366862 DND1Q8IYX4 353 aaKnown RBP14.33□□□□□ -0.11
FBXO28-201ENST00000366862 ACTR3CQ9C0K3 210 aaPredicted RBP14.33□□□□□ -0.11
FBXO28-201ENST00000366862 LYRM2Q9NU23 88 aaPredicted RBP14.33□□□□□ -0.11
FBXO28-201ENST00000366862 MED16Q9Y2X0 877 aa14.33□□□□□ -0.11
FBXO28-201ENST00000366862 TMEM184BQ9Y519 407 aaPredicted RBP14.33□□□□□ -0.11
FBXO28-201ENST00000366862 AP4M1O00189 453 aa14.33□□□□□ -0.12
FBXO28-201ENST00000366862 HSD17B6O14756 317 aa14.33□□□□□ -0.12
FBXO28-201ENST00000366862 SLC10A1Q14973 349 aa14.33□□□□□ -0.12
FBXO28-201ENST00000366862 DERL3Q96Q80 235 aa14.33□□□□□ -0.12
FBXO28-201ENST00000366862 NTNG1Q9Y2I2 539 aa14.33□□□□□ -0.12
FBXO28-201ENST00000366862 ANKRD61A6NGH8 418 aa14.33□□□□□ -0.12
FBXO28-201ENST00000366862 ZFAND5O76080 213 aa14.33□□□□□ -0.12
FBXO28-201ENST00000366862 S100A7P31151 101 aa14.33□□□□□ -0.12
FBXO28-201ENST00000366862 Q6ZSR6 202 aa14.33□□□□□ -0.12
FBXO28-201ENST00000366862 CAMKMTQ7Z624 323 aa14.33□□□□□ -0.12
FBXO28-201ENST00000366862 LHX4Q969G2 390 aa14.33□□□□□ -0.12
FBXO28-201ENST00000366862 PIGTQ969N2 578 aa14.33□□□□□ -0.12
FBXO28-201ENST00000366862 MRPL22Q9NWU5 206 aaKnown RBP14.33□□□□□ -0.12
FBXO28-201ENST00000366862 FOXJ3Q9UPW0 622 aa14.33□□□□□ -0.12
FBXO28-201ENST00000366862 UBR2Q8IWV8 1755 aa14.33□□□□□ -0.12
FBXO28-201ENST00000366862 C2orf72A6NCS6 295 aa14.33□□□□□ -0.12
FBXO28-201ENST00000366862 EIF4E2O60573 245 aaKnown RBP14.33□□□□□ -0.12
FBXO28-201ENST00000366862 OR8U8P0C7N1 319 aa14.33□□□□□ -0.12
FBXO28-201ENST00000366862 C17orf67Q0P5P2 114 aa14.33□□□□□ -0.12
FBXO28-201ENST00000366862 C1orf140Q5VVS0 124 aa14.33□□□□□ -0.12
FBXO28-201ENST00000366862 SLC16A13Q7RTY0 426 aa14.33□□□□□ -0.12
FBXO28-201ENST00000366862 MRPL38Q96DV4 380 aaKnown RBP14.33□□□□□ -0.12
FBXO28-201ENST00000366862 CLSTN3Q9BQT9 956 aa14.33□□□□□ -0.12
FBXO28-201ENST00000366862 PIGLQ9Y2B2 252 aa14.33□□□□□ -0.12
FBXO28-201ENST00000366862 LRP3O75074 770 aa14.32□□□□□ -0.12
FBXO28-201ENST00000366862 GLSO94925 669 aaPredicted RBP14.32□□□□□ -0.12
FBXO28-201ENST00000366862 AKR1C3P42330 323 aa14.32□□□□□ -0.12
FBXO28-201ENST00000366862 ACOT6Q3I5F7 207 aaPredicted RBP14.32□□□□□ -0.12
FBXO28-201ENST00000366862 OR8G2PQ6IF36 304 aa14.32□□□□□ -0.12
FBXO28-201ENST00000366862 PLXDC2Q6UX71 529 aa14.32□□□□□ -0.12
FBXO28-201ENST00000366862 ZNF429Q86V71 674 aa14.32□□□□□ -0.12
FBXO28-201ENST00000366862 GJC3Q8NFK1 279 aa14.32□□□□□ -0.12
FBXO28-201ENST00000366862 GOT1L1Q8NHS2 421 aaPredicted RBP14.32□□□□□ -0.12
FBXO28-201ENST00000366862 C19orf43Q9BQ61 176 aa14.32□□□□□ -0.12
FBXO28-201ENST00000366862 SLC46A2Q9BY10 475 aa14.32□□□□□ -0.12
FBXO28-201ENST00000366862 CDC14CA4D256 554 aa14.32□□□□□ -0.12
FBXO28-201ENST00000366862 GPR31O00270 319 aa14.32□□□□□ -0.12
FBXO28-201ENST00000366862 NPBWR1P48145 328 aa14.32□□□□□ -0.12
FBXO28-201ENST00000366862 RNF165Q6ZSG1 346 aa14.32□□□□□ -0.12
FBXO28-201ENST00000366862 ACAD8Q9UKU7 415 aa14.32□□□□□ -0.12
FBXO28-201ENST00000366862 LAMP3Q9UQV4 416 aa14.32□□□□□ -0.12
FBXO28-201ENST00000366862 V9GYH0 126 aa14.32□□□□□ -0.12
FBXO28-201ENST00000366862 TJP1Q07157 1748 aa14.32□□□□□ -0.12
FBXO28-201ENST00000366862 A0A087WV62 115 aa14.32□□□□□ -0.12
FBXO28-201ENST00000366862 CDK5Q00535 292 aa14.32□□□□□ -0.12
FBXO28-201ENST00000366862 PLGLAQ15195 96 aa14.32□□□□□ -0.12
FBXO28-201ENST00000366862 CYHR1Q6ZMK1 362 aa14.32□□□□□ -0.12
FBXO28-201ENST00000366862 RTL10Q7L3V2 364 aa14.32□□□□□ -0.12
FBXO28-201ENST00000366862 OR4N2Q8NGD1 307 aa14.32□□□□□ -0.12
FBXO28-201ENST00000366862 NUDCD2Q8WVJ2 157 aa14.32□□□□□ -0.12
FBXO28-201ENST00000366862 MS4A6EQ96DS6 147 aa14.32□□□□□ -0.12
FBXO28-201ENST00000366862 VAMP8Q9BV40 100 aa14.32□□□□□ -0.12
FBXO28-201ENST00000366862 ELOA3CA0A087WX78 387 aaPredicted RBP14.32□□□□□ -0.12
FBXO28-201ENST00000366862 A0A1B0GTL3 188 aa14.32□□□□□ -0.12
FBXO28-201ENST00000366862 SEC14L6B5MCN3 397 aa14.32□□□□□ -0.12
FBXO28-201ENST00000366862 NXPH3O95157 252 aa14.32□□□□□ -0.12
FBXO28-201ENST00000366862 ERV3-1Q14264 604 aa14.32□□□□□ -0.12
FBXO28-201ENST00000366862 SMAD2Q15796 467 aaKnown RBP14.32□□□□□ -0.12
FBXO28-201ENST00000366862 GTF2H5Q6ZYL4 71 aa14.32□□□□□ -0.12
FBXO28-201ENST00000366862 OR4C5Q8NGB2 326 aa14.32□□□□□ -0.12
FBXO28-201ENST00000366862 NRXN3Q9Y4C0 1643 aa14.32□□□□□ -0.12
FBXO28-201ENST00000366862 SCAND1P57086 179 aa14.31□□□□□ -0.12
FBXO28-201ENST00000366862 SIRT6Q8N6T7 355 aa14.31□□□□□ -0.12
FBXO28-201ENST00000366862 FAM103A1Q9BTL3 118 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms