RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 PAPOLGQ9BWT3 736 aaKnown RBP10.75□□□□□ -0.69
CDC42BPA-202ENST00000366764 EXO1Q9UQ84 846 aaKnown RBP10.75□□□□□ -0.69
CDC42BPA-202ENST00000366764 A0A1B0GX78 115 aa10.75□□□□□ -0.69
CDC42BPA-202ENST00000366764 PRAMEF27A3QJZ7 478 aa10.75□□□□□ -0.69
CDC42BPA-202ENST00000366764 ST8SIA3O43173 380 aa10.75□□□□□ -0.69
CDC42BPA-202ENST00000366764 SSX4O60224 188 aa10.75□□□□□ -0.69
CDC42BPA-202ENST00000366764 SCGB2A1O75556 95 aa10.75□□□□□ -0.69
CDC42BPA-202ENST00000366764 EPHA4P54764 986 aa10.75□□□□□ -0.69
CDC42BPA-202ENST00000366764 ZNF750Q32MQ0 723 aa10.75□□□□□ -0.69
CDC42BPA-202ENST00000366764 TMEM176BQ3YBM2 270 aaPredicted RBP10.75□□□□□ -0.69
CDC42BPA-202ENST00000366764 PRAMEF9Q5VWM5 478 aa10.75□□□□□ -0.69
CDC42BPA-202ENST00000366764 GNPNAT1Q96EK6 184 aaPredicted RBP10.75□□□□□ -0.69
CDC42BPA-202ENST00000366764 TMEM235A6NFC5 223 aa10.75□□□□□ -0.69
CDC42BPA-202ENST00000366764 ATF1P18846 271 aa10.75□□□□□ -0.69
CDC42BPA-202ENST00000366764 NFYBP25208 207 aa10.75□□□□□ -0.69
CDC42BPA-202ENST00000366764 CST9Q5W186 159 aa10.75□□□□□ -0.69
CDC42BPA-202ENST00000366764 SKA3Q8IX90 412 aa10.75□□□□□ -0.69
CDC42BPA-202ENST00000366764 SPPL3Q8TCT6 385 aa10.75□□□□□ -0.69
CDC42BPA-202ENST00000366764 NKX3-1Q99801 234 aaPredicted RBP10.75□□□□□ -0.69
CDC42BPA-202ENST00000366764 MRPS18AQ9NVS2 196 aaKnown RBP10.75□□□□□ -0.69
CDC42BPA-202ENST00000366764 NPY4RP50391 375 aa10.75□□□□□ -0.69
CDC42BPA-202ENST00000366764 PDZK1IP1Q13113 114 aa10.75□□□□□ -0.69
CDC42BPA-202ENST00000366764 ANGPTL5Q86XS5 388 aa10.75□□□□□ -0.69
CDC42BPA-202ENST00000366764 OR9K2Q8NGE7 335 aa10.75□□□□□ -0.69
CDC42BPA-202ENST00000366764 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.75□□□□□ -0.69
CDC42BPA-202ENST00000366764 PRSS44E7EML9 344 aa10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 UBE2NP61088 152 aaKnown RBP10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 CHAC2Q8WUX2 184 aa10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 TECTBQ96PL2 329 aa10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 CDH20Q9HBT6 801 aa10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 CXXC1Q9P0U4 656 aaPredicted RBP10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 PLRG1O43660 514 aaKnown RBP10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 SCAF4O95104 1147 aaKnown RBP10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 DCTDP32321 178 aa10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 APLNRP35414 380 aa10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 ELSPBP1Q96BH3 223 aa10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 ANKRD9Q96BM1 317 aaPredicted RBP10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 PADI1Q9ULC6 663 aa10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 MAOBP27338 520 aa10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 DUSP1P28562 367 aa10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 SLC25A35Q3KQZ1 300 aa10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 VWA2Q5GFL6 755 aa10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 SLC37A2Q8TED4 501 aa10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 PSMF1Q92530 271 aa10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 SEH1LQ96EE3 360 aa10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 MAP6Q96JE9 813 aa10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 SLC52A3Q9NQ40 469 aa10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 WDR90Q96KV7 1748 aa10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 TRBV11-1A0A0K0K1C0 115 aa10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 SERPINE3A8MV23 424 aa10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 OR10Z1Q8NGY1 313 aa10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 FGGYQ96C11 551 aa10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 OCSTAMPQ9BR26 566 aa10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 ABHD6Q9BV23 337 aa10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 FANCMQ8IYD8 2048 aa10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 E5RGE8 158 aa10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 HOXC4P09017 264 aaPredicted RBP10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 HSD17B13Q7Z5P4 300 aaPredicted RBP10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 FAM213BQ8TBF2 198 aa10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 TAS2R4Q9NYW5 299 aa10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 VSX1Q9NZR4 365 aaPredicted RBP10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 NSG2Q9Y328 171 aa10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 RAB39BQ96DA2 213 aa10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 TBX21Q9UL17 535 aa10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 ACKR1Q16570 336 aa10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 PLXDC2Q6UX71 529 aa10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 PELI1Q96FA3 418 aa10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 RNF32Q9H0A6 362 aa10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 BOKQ9UMX3 212 aaPredicted RBP10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 A0A1B0GV50 99 aa10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 P2RY10O00398 339 aa10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 IGHEP01854 428 aa10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 CD300CQ08708 224 aa10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 TMEM128Q5BJH2 165 aa10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 FJX1Q86VR8 437 aa10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 COMTD1Q86VU5 262 aa10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 C16orf52Q8NHV5 167 aa10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 DERL3Q96Q80 235 aa10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 PHF3Q92576 2039 aaKnown RBP10.74□□□□□ -0.69
CDC42BPA-202ENST00000366764 CAPZBP47756 277 aa10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 C22orf15Q8WYQ4 148 aa10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 POMT1Q9Y6A1 747 aa10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 MCRIP1C9JLW8 97 aa10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 TXNL1O43396 289 aa10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 NKX2-2O95096 273 aa10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 ITGB2P05107 769 aa10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 JMJD7P0C870 316 aa10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 CDONQ4KMG0 1287 aa10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 ABHD17BQ5VST6 288 aa10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 AGBL4Q5VU57 503 aa10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 OLIG3Q7RTU3 272 aa10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 PRSS42Q7Z5A4 293 aa10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 TMEM100Q9NV29 134 aa10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 ADRA2CP18825 462 aa10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 TAGLN2P37802 199 aaKnown RBP10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 ZP2Q05996 745 aa10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 PXDC1Q5TGL8 231 aa10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 EID2BQ96D98 161 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms