RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 OR5M11Q96RB7 305 aa18.06■□□□□ 0.48
SHISA4-201ENST00000362011 OR8B4Q96RC9 309 aa18.06■□□□□ 0.48
SHISA4-201ENST00000362011 IKZF2Q9UKS7 526 aa18.06■□□□□ 0.48
SHISA4-201ENST00000362011 A0A096LPE4 126 aa18.05■□□□□ 0.48
SHISA4-201ENST00000362011 A0A1W2PPZ6 126 aa18.05■□□□□ 0.48
SHISA4-201ENST00000362011 PRR32B1ATL7 298 aa18.05■□□□□ 0.48
SHISA4-201ENST00000362011 LYZL6O75951 148 aa18.05■□□□□ 0.48
SHISA4-201ENST00000362011 CAPZA2P47755 286 aa18.05■□□□□ 0.48
SHISA4-201ENST00000362011 ALDH3B2P48448 385 aa18.05■□□□□ 0.48
SHISA4-201ENST00000362011 HIST1H3AP68431 136 aa18.05■□□□□ 0.48
SHISA4-201ENST00000362011 P2RY6Q15077 328 aa18.05■□□□□ 0.48
SHISA4-201ENST00000362011 SLC36A2Q495M3 483 aa18.05■□□□□ 0.48
SHISA4-201ENST00000362011 HIST2H3PS2Q5TEC6 136 aa18.05■□□□□ 0.48
SHISA4-201ENST00000362011 HIST2H3AQ71DI3 136 aa18.05■□□□□ 0.48
SHISA4-201ENST00000362011 KCTD20Q7Z5Y7 419 aa18.05■□□□□ 0.48
SHISA4-201ENST00000362011 FJX1Q86VR8 437 aa18.05■□□□□ 0.48
SHISA4-201ENST00000362011 CXorf67Q86X51 503 aaPredicted RBP18.05■□□□□ 0.48
SHISA4-201ENST00000362011 RELL2Q8NC24 303 aaPredicted RBP18.05■□□□□ 0.48
SHISA4-201ENST00000362011 GATAD2BQ8WXI9 593 aa18.05■□□□□ 0.48
SHISA4-201ENST00000362011 NANOS1Q8WY41 292 aaKnown RBP18.05■□□□□ 0.48
SHISA4-201ENST00000362011 ISG20L2Q9H9L3 353 aaKnown RBP18.05■□□□□ 0.48
SHISA4-201ENST00000362011 GALNT8Q9NY28 637 aa18.05■□□□□ 0.48
SHISA4-201ENST00000362011 GNG8Q9UK08 70 aa18.05■□□□□ 0.48
SHISA4-201ENST00000362011 METTL15A6NJ78 407 aa18.04■□□□□ 0.48
SHISA4-201ENST00000362011 ZNF878C9JN71 531 aa18.04■□□□□ 0.48
SHISA4-201ENST00000362011 PSMD9O00233 223 aa18.04■□□□□ 0.48
SHISA4-201ENST00000362011 MAGEB4O15481 346 aaPredicted RBP18.04■□□□□ 0.48
SHISA4-201ENST00000362011 RAD51DO75771 328 aa18.04■□□□□ 0.48
SHISA4-201ENST00000362011 SULT1C4O75897 302 aa18.04■□□□□ 0.48
SHISA4-201ENST00000362011 INMTO95050 263 aa18.04■□□□□ 0.48
SHISA4-201ENST00000362011 TACSTD2P09758 323 aa18.04■□□□□ 0.48
SHISA4-201ENST00000362011 PRF1P14222 555 aa18.04■□□□□ 0.48
SHISA4-201ENST00000362011 ZNF32P17041 273 aa18.04■□□□□ 0.48
SHISA4-201ENST00000362011 PSMB9P28065 219 aa18.04■□□□□ 0.48
SHISA4-201ENST00000362011 RPL5P46777 297 aaKnown RBP18.04■□□□□ 0.48
SHISA4-201ENST00000362011 OR12D2P58182 307 aa18.04■□□□□ 0.48
SHISA4-201ENST00000362011 ROM1Q03395 351 aa18.04■□□□□ 0.48
SHISA4-201ENST00000362011 GABRA6Q16445 453 aa18.04■□□□□ 0.48
SHISA4-201ENST00000362011 TBRG1Q3YBR2 411 aa18.04■□□□□ 0.48
SHISA4-201ENST00000362011 ZNF684Q5T5D7 378 aa18.04■□□□□ 0.48
SHISA4-201ENST00000362011 ZNF474Q6S9Z5 364 aaPredicted RBP18.04■□□□□ 0.48
SHISA4-201ENST00000362011 LRRN1Q6UXK5 716 aa18.04■□□□□ 0.48
SHISA4-201ENST00000362011 SPATC1Q76KD6 591 aa18.04■□□□□ 0.48
SHISA4-201ENST00000362011 DPPA2Q7Z7J5 298 aa18.04■□□□□ 0.48
SHISA4-201ENST00000362011 EGFL6Q8IUX8 553 aa18.04■□□□□ 0.48
SHISA4-201ENST00000362011 LIX1LQ8IVB5 337 aa18.04■□□□□ 0.48
SHISA4-201ENST00000362011 ZNF679Q8IYX0 411 aa18.04■□□□□ 0.48
SHISA4-201ENST00000362011 YIPF7Q8N8F6 280 aa18.04■□□□□ 0.48
SHISA4-201ENST00000362011 ZNF485Q8NCK3 441 aa18.04■□□□□ 0.48
SHISA4-201ENST00000362011 RNF133Q8WVZ7 376 aa18.04■□□□□ 0.48
SHISA4-201ENST00000362011 MROQ9BYG7 248 aa18.04■□□□□ 0.48
SHISA4-201ENST00000362011 RNF121Q9H920 327 aa18.04■□□□□ 0.48
SHISA4-201ENST00000362011 CENPMQ9NSP4 180 aa18.04■□□□□ 0.48
SHISA4-201ENST00000362011 SLCO1C1Q9NYB5 712 aa18.04■□□□□ 0.48
SHISA4-201ENST00000362011 MRM2Q9UI43 246 aaKnown RBP18.04■□□□□ 0.48
SHISA4-201ENST00000362011 A8MXE2 369 aa18.03■□□□□ 0.48
SHISA4-201ENST00000362011 RER1O15258 196 aa18.03■□□□□ 0.48
SHISA4-201ENST00000362011 LRRTM2O43300 516 aa18.03■□□□□ 0.48
SHISA4-201ENST00000362011 ZNF254O75437 659 aa18.03■□□□□ 0.48
SHISA4-201ENST00000362011 UBL3O95164 117 aa18.03■□□□□ 0.48
SHISA4-201ENST00000362011 WNT11O96014 354 aa18.03■□□□□ 0.48
SHISA4-201ENST00000362011 H2BFMP0C1H6 154 aa18.03■□□□□ 0.48
SHISA4-201ENST00000362011 RIDAP52758 137 aaKnown RBP18.03■□□□□ 0.48
SHISA4-201ENST00000362011 GBX2P52951 348 aaPredicted RBP18.03■□□□□ 0.48
SHISA4-201ENST00000362011 TIGD6Q17RP2 521 aa18.03■□□□□ 0.48
SHISA4-201ENST00000362011 SFRP5Q5T4F7 317 aa18.03■□□□□ 0.48
SHISA4-201ENST00000362011 SYT6Q5T7P8 510 aaPredicted RBP18.03■□□□□ 0.48
SHISA4-201ENST00000362011 OR7E24Q6IFN5 339 aa18.03■□□□□ 0.48
SHISA4-201ENST00000362011 TMEM53Q6P2H8 277 aa18.03■□□□□ 0.48
SHISA4-201ENST00000362011 DEGS2Q6QHC5 323 aa18.03■□□□□ 0.48
SHISA4-201ENST00000362011 VASH1Q7L8A9 365 aaPredicted RBP18.03■□□□□ 0.48
SHISA4-201ENST00000362011 KLBQ86Z14 1044 aa18.03■□□□□ 0.48
SHISA4-201ENST00000362011 OR10S1Q8NGN2 331 aa18.03■□□□□ 0.48
SHISA4-201ENST00000362011 BOD1Q96IK1 185 aa18.03■□□□□ 0.48
SHISA4-201ENST00000362011 COG8Q96MW5 612 aa18.03■□□□□ 0.48
SHISA4-201ENST00000362011 MGLLQ99685 303 aa18.03■□□□□ 0.48
SHISA4-201ENST00000362011 ISYNA1Q9NPH2 558 aa18.03■□□□□ 0.48
SHISA4-201ENST00000362011 COQ3Q9NZJ6 369 aa18.03■□□□□ 0.48
SHISA4-201ENST00000362011 TIMM10BQ9Y5J6 103 aa18.03■□□□□ 0.48
SHISA4-201ENST00000362011 OTOGQ6ZRI0 2925 aa18.03■□□□□ 0.48
SHISA4-201ENST00000362011 SGCEO43556 437 aa18.02■□□□□ 0.48
SHISA4-201ENST00000362011 MMP7P09237 267 aaPredicted RBP18.02■□□□□ 0.48
SHISA4-201ENST00000362011 PATE4P0C8F1 98 aa18.02■□□□□ 0.48
SHISA4-201ENST00000362011 HSMCR30P0CW71 290 aa18.02■□□□□ 0.48
SHISA4-201ENST00000362011 HOXB1P14653 301 aaPredicted RBP18.02■□□□□ 0.48
SHISA4-201ENST00000362011 CHRNB4P30926 498 aa18.02■□□□□ 0.48
SHISA4-201ENST00000362011 GP2P55259 537 aaKnown RBP18.02■□□□□ 0.48
SHISA4-201ENST00000362011 ACSM1Q08AH1 577 aa18.02■□□□□ 0.48
SHISA4-201ENST00000362011 MLLT11Q13015 90 aaPredicted RBP18.02■□□□□ 0.48
SHISA4-201ENST00000362011 RAB35Q15286 201 aa18.02■□□□□ 0.48
SHISA4-201ENST00000362011 TAF13Q15543 124 aa18.02■□□□□ 0.48
SHISA4-201ENST00000362011 HIKESHIQ53FT3 197 aa18.02■□□□□ 0.48
SHISA4-201ENST00000362011 CCDC92Q53HC0 331 aaPredicted RBP18.02■□□□□ 0.48
SHISA4-201ENST00000362011 ELFN2Q5R3F8 820 aa18.02■□□□□ 0.48
SHISA4-201ENST00000362011 MTFR2Q6P444 385 aa18.02■□□□□ 0.48
SHISA4-201ENST00000362011 RHOUQ7L0Q8 258 aa18.02■□□□□ 0.48
SHISA4-201ENST00000362011 BHLHA15Q7RTS1 189 aaPredicted RBP18.02■□□□□ 0.48
SHISA4-201ENST00000362011 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.02■□□□□ 0.48
SHISA4-201ENST00000362011 CCDC36Q8IYA8 594 aa18.02■□□□□ 0.48
SHISA4-201ENST00000362011 FGFBP3Q8TAT2 258 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 140.6 ms