RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 CAMK2DQ13557 499 aa4.55□□□□□ -1.68
ATXN3-202ENST00000359366 SGCBQ16585 318 aa4.55□□□□□ -1.68
ATXN3-202ENST00000359366 SWI5Q1ZZU3 235 aa4.55□□□□□ -1.68
ATXN3-202ENST00000359366 TIMM50Q3ZCQ8 353 aa4.55□□□□□ -1.68
ATXN3-202ENST00000359366 ACER2Q5QJU3 275 aa4.55□□□□□ -1.68
ATXN3-202ENST00000359366 LRRN1Q6UXK5 716 aa4.55□□□□□ -1.68
ATXN3-202ENST00000359366 CFAP77Q6ZQR2 320 aa4.55□□□□□ -1.68
ATXN3-202ENST00000359366 SSX9Q7RTT3 188 aa4.55□□□□□ -1.68
ATXN3-202ENST00000359366 LINC00346Q8IVM7 164 aa4.55□□□□□ -1.68
ATXN3-202ENST00000359366 TCTE3Q8IZS6 198 aa4.55□□□□□ -1.68
ATXN3-202ENST00000359366 IL22RA1Q8N6P7 574 aa4.55□□□□□ -1.68
ATXN3-202ENST00000359366 ARIH2OSQ8N7S6 290 aa4.55□□□□□ -1.68
ATXN3-202ENST00000359366 NEIL3Q8TAT5 605 aa4.55□□□□□ -1.68
ATXN3-202ENST00000359366 M1APQ8TC57 530 aa4.55□□□□□ -1.68
ATXN3-202ENST00000359366 LIPHQ8WWY8 451 aa4.55□□□□□ -1.68
ATXN3-202ENST00000359366 ST8SIA1Q92185 356 aa4.55□□□□□ -1.68
ATXN3-202ENST00000359366 LIN37Q96GY3 246 aaPredicted RBP4.55□□□□□ -1.68
ATXN3-202ENST00000359366 ADAD1Q96M93 576 aaKnown RBP4.55□□□□□ -1.68
ATXN3-202ENST00000359366 KCTD7Q96MP8 289 aa4.55□□□□□ -1.68
ATXN3-202ENST00000359366 GPX7Q96SL4 187 aaPredicted RBP4.55□□□□□ -1.68
ATXN3-202ENST00000359366 SHARPINQ9H0F6 387 aa4.55□□□□□ -1.68
ATXN3-202ENST00000359366 B3GAT2Q9NPZ5 323 aa4.55□□□□□ -1.68
ATXN3-202ENST00000359366 ZNF224Q9NZL3 707 aa4.55□□□□□ -1.68
ATXN3-202ENST00000359366 COMMD3Q9UBI1 195 aa4.55□□□□□ -1.68
ATXN3-202ENST00000359366 ASH2LQ9UBL3 628 aa4.55□□□□□ -1.68
ATXN3-202ENST00000359366 NDRG3Q9UGV2 375 aa4.55□□□□□ -1.68
ATXN3-202ENST00000359366 IKZF2Q9UKS7 526 aa4.55□□□□□ -1.68
ATXN3-202ENST00000359366 COA3Q9Y2R0 106 aaPredicted RBP4.55□□□□□ -1.68
ATXN3-202ENST00000359366 SLC22A23A1A5C7 686 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 PRSS37A4D1T9 235 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 EIF1AYO14602 144 aaKnown RBP4.54□□□□□ -1.68
ATXN3-202ENST00000359366 SEC14L5O43304 696 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 ZIC3O60481 467 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 TRAPPC6AO75865 159 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 RAB3DO95716 219 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 RENP00797 406 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 FCER2P06734 321 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 CD63P08962 238 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 SPARCP09486 303 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 SLC2A2P11168 524 aaPredicted RBP4.54□□□□□ -1.68
ATXN3-202ENST00000359366 ITGA3P26006 1051 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 CDAP32320 146 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 APOBEC1P41238 236 aaKnown RBP4.54□□□□□ -1.68
ATXN3-202ENST00000359366 RPL35P42766 123 aaKnown RBP4.54□□□□□ -1.68
ATXN3-202ENST00000359366 RPP30P78346 268 aaKnown RBP4.54□□□□□ -1.68
ATXN3-202ENST00000359366 SMCO1Q147U7 214 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 GRK1Q15835 563 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 SLC22A10Q63ZE4 541 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 OPN5Q6U736 354 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 CLEC2AQ6UVW9 174 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 H1FNTQ75WM6 255 aaPredicted RBP4.54□□□□□ -1.68
ATXN3-202ENST00000359366 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.54□□□□□ -1.68
ATXN3-202ENST00000359366 CEACAM19Q7Z692 300 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 LYSMD2Q8IV50 215 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 MISPQ8IVT2 679 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 SLC43A2Q8N370 569 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 PARP16Q8N5Y8 322 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 OR56B2PQ8NGI1 322 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 OR51A4Q8NGJ6 313 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 OR1J4Q8NGS1 313 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 OR10AC1Q8NH08 325 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 ZNF519Q8TB69 540 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 SETD6Q8TBK2 473 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 RNF138Q8WVD3 245 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 THAP4Q8WY91 577 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 PSMF1Q92530 271 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 DDIT4LQ96D03 193 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 ST6GAL2Q96JF0 529 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 RNF170Q96K19 258 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 PGLYRP3Q96LB9 341 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 DACH2Q96NX9 599 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 SIGLEC12Q96PQ1 595 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 OR14A2Q96R54 314 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 CDC6Q99741 560 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 DDA1Q9BW61 102 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 KRTAP4-7Q9BYR0 210 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 SMURF1Q9HCE7 757 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 ABCB9Q9NP78 766 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 TRIM36Q9NQ86 728 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 MRPL22Q9NWU5 206 aaKnown RBP4.54□□□□□ -1.68
ATXN3-202ENST00000359366 PLEKHB1Q9UF11 243 aaPredicted RBP4.54□□□□□ -1.68
ATXN3-202ENST00000359366 ST6GALNAC2Q9UJ37 374 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 DKKL1Q9UK85 242 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 PCDHGB7Q9Y5F8 929 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 NBEAQ8NFP9 2946 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 TRBV2A0A0J9YWF9 115 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 OR2M5A3KFT3 312 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 NPIPA5E9PKD4 350 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 ZNF593O00488 134 aaPredicted RBP4.54□□□□□ -1.68
ATXN3-202ENST00000359366 TNFSF11O14788 317 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 SLC31A2O15432 143 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 ZNHIT1O43257 154 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 RGS9O75916 674 aaPredicted RBP4.54□□□□□ -1.68
ATXN3-202ENST00000359366 SLC22A5O76082 557 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 CNOT4O95628 575 aaKnown RBP4.54□□□□□ -1.68
ATXN3-202ENST00000359366 MT-ATP6P00846 226 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 IGHV2-70P01814 119 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 CELA3AP09093 270 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 EDN3P14138 238 aa4.54□□□□□ -1.68
ATXN3-202ENST00000359366 LIFP15018 202 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms