RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 TRIB1Q96RU8 372 aa12.2□□□□□ -0.46
PDLIM5-203ENST00000359265 TM9SF2Q99805 663 aa12.2□□□□□ -0.46
PDLIM5-203ENST00000359265 KCNN2Q9H2S1 579 aa12.2□□□□□ -0.46
PDLIM5-203ENST00000359265 CRLF2Q9HC73 371 aa12.2□□□□□ -0.46
PDLIM5-203ENST00000359265 GPR35Q9HC97 309 aa12.2□□□□□ -0.46
PDLIM5-203ENST00000359265 TMEM38BQ9NVV0 291 aa12.2□□□□□ -0.46
PDLIM5-203ENST00000359265 GDF2Q9UK05 429 aaPredicted RBP12.2□□□□□ -0.46
PDLIM5-203ENST00000359265 CLEC4AQ9UMR7 237 aa12.2□□□□□ -0.46
PDLIM5-203ENST00000359265 LRP12Q9Y561 859 aa12.2□□□□□ -0.46
PDLIM5-203ENST00000359265 LHFPL6Q9Y693 200 aa12.2□□□□□ -0.46
PDLIM5-203ENST00000359265 CRYBG3Q68DQ2 2970 aa12.2□□□□□ -0.46
PDLIM5-203ENST00000359265 CACNA1CQ13936 2221 aa12.19□□□□□ -0.46
PDLIM5-203ENST00000359265 CENPEQ02224 2701 aa12.19□□□□□ -0.46
PDLIM5-203ENST00000359265 AHRRA9YTQ3 701 aa12.19□□□□□ -0.46
PDLIM5-203ENST00000359265 ZNF878C9JN71 531 aa12.19□□□□□ -0.46
PDLIM5-203ENST00000359265 ZNF587BE7ETH6 402 aa12.19□□□□□ -0.46
PDLIM5-203ENST00000359265 TGM6O95932 706 aa12.19□□□□□ -0.46
PDLIM5-203ENST00000359265 H2BFMP0C1H6 154 aa12.19□□□□□ -0.46
PDLIM5-203ENST00000359265 TGFBR1P36897 503 aa12.19□□□□□ -0.46
PDLIM5-203ENST00000359265 ROR2Q01974 943 aaKnown RBP12.19□□□□□ -0.46
PDLIM5-203ENST00000359265 CEACAM16Q2WEN9 425 aa12.19□□□□□ -0.46
PDLIM5-203ENST00000359265 ZNF829Q3KNS6 432 aaPredicted RBP12.19□□□□□ -0.46
PDLIM5-203ENST00000359265 KRTAP21-3Q3LHN1 58 aa12.19□□□□□ -0.46
PDLIM5-203ENST00000359265 TSPO2Q5TGU0 170 aa12.19□□□□□ -0.46
PDLIM5-203ENST00000359265 ZNF324BQ6AW86 544 aaPredicted RBP12.19□□□□□ -0.46
PDLIM5-203ENST00000359265 C22orf42Q6IC83 251 aa12.19□□□□□ -0.46
PDLIM5-203ENST00000359265 OR7E24Q6IFN5 339 aa12.19□□□□□ -0.46
PDLIM5-203ENST00000359265 FDX2Q6P4F2 183 aa12.19□□□□□ -0.46
PDLIM5-203ENST00000359265 CORO6Q6QEF8 472 aa12.19□□□□□ -0.46
PDLIM5-203ENST00000359265 SPATC1Q76KD6 591 aa12.19□□□□□ -0.46
PDLIM5-203ENST00000359265 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.19□□□□□ -0.46
PDLIM5-203ENST00000359265 ZNF100Q8IYN0 542 aa12.19□□□□□ -0.46
PDLIM5-203ENST00000359265 CISD2Q8N5K1 135 aaKnown RBP12.19□□□□□ -0.46
PDLIM5-203ENST00000359265 RNF133Q8WVZ7 376 aa12.19□□□□□ -0.46
PDLIM5-203ENST00000359265 NABP1Q96AH0 204 aa12.19□□□□□ -0.46
PDLIM5-203ENST00000359265 TRMT61AQ96FX7 289 aaKnown RBP12.19□□□□□ -0.46
PDLIM5-203ENST00000359265 GMPPAQ96IJ6 420 aaPredicted RBP12.19□□□□□ -0.46
PDLIM5-203ENST00000359265 MAP6Q96JE9 813 aa12.19□□□□□ -0.46
PDLIM5-203ENST00000359265 KCTD7Q96MP8 289 aa12.19□□□□□ -0.46
PDLIM5-203ENST00000359265 ZNF416Q9BWM5 594 aa12.19□□□□□ -0.46
PDLIM5-203ENST00000359265 COMMD4Q9H0A8 199 aa12.19□□□□□ -0.46
PDLIM5-203ENST00000359265 RNF167Q9H6Y7 350 aa12.19□□□□□ -0.46
PDLIM5-203ENST00000359265 CENPMQ9NSP4 180 aa12.19□□□□□ -0.46
PDLIM5-203ENST00000359265 CCDC59Q9P031 241 aaKnown RBP12.19□□□□□ -0.46
PDLIM5-203ENST00000359265 ASH2LQ9UBL3 628 aa12.19□□□□□ -0.46
PDLIM5-203ENST00000359265 UPB1Q9UBR1 384 aa12.19□□□□□ -0.46
PDLIM5-203ENST00000359265 SETD2Q9BYW2 2564 aaPredicted RBP12.19□□□□□ -0.46
PDLIM5-203ENST00000359265 SPENQ96T58 3664 aaKnown RBP12.18□□□□□ -0.46
PDLIM5-203ENST00000359265 FREM1Q5H8C1 2179 aa12.18□□□□□ -0.46
PDLIM5-203ENST00000359265 CD8B2A6NJW9 211 aa12.18□□□□□ -0.46
PDLIM5-203ENST00000359265 TMEM212A6NML5 194 aa12.18□□□□□ -0.46
PDLIM5-203ENST00000359265 LRRTM2O43300 516 aa12.18□□□□□ -0.46
PDLIM5-203ENST00000359265 SS18L1O75177 396 aaPredicted RBP12.18□□□□□ -0.46
PDLIM5-203ENST00000359265 WNT11O96014 354 aa12.18□□□□□ -0.46
PDLIM5-203ENST00000359265 CD8BP10966 210 aa12.18□□□□□ -0.46
PDLIM5-203ENST00000359265 OPRL1P41146 370 aa12.18□□□□□ -0.46
PDLIM5-203ENST00000359265 ENDOGQ14249 297 aaKnown RBP12.18□□□□□ -0.46
PDLIM5-203ENST00000359265 TAF13Q15543 124 aa12.18□□□□□ -0.46
PDLIM5-203ENST00000359265 ACSF3Q4G176 576 aaPredicted RBP12.18□□□□□ -0.46
PDLIM5-203ENST00000359265 FAM27BQ5VT28 67 aa12.18□□□□□ -0.46
PDLIM5-203ENST00000359265 KLHL24Q6TFL4 600 aa12.18□□□□□ -0.46
PDLIM5-203ENST00000359265 PAMR1Q6UXH9 720 aa12.18□□□□□ -0.46
PDLIM5-203ENST00000359265 CFAP77Q6ZQR2 320 aa12.18□□□□□ -0.46
PDLIM5-203ENST00000359265 RHOUQ7L0Q8 258 aa12.18□□□□□ -0.46
PDLIM5-203ENST00000359265 LINGO2Q7L985 606 aa12.18□□□□□ -0.46
PDLIM5-203ENST00000359265 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.18□□□□□ -0.46
PDLIM5-203ENST00000359265 ABHD12BQ7Z5M8 362 aaPredicted RBP12.18□□□□□ -0.46
PDLIM5-203ENST00000359265 OR5M9Q8NGP3 310 aa12.18□□□□□ -0.46
PDLIM5-203ENST00000359265 OR2G2Q8NGZ5 317 aa12.18□□□□□ -0.46
PDLIM5-203ENST00000359265 HTRA1Q92743 480 aa12.18□□□□□ -0.46
PDLIM5-203ENST00000359265 GHSRQ92847 366 aa12.18□□□□□ -0.46
PDLIM5-203ENST00000359265 WNT2BQ93097 391 aa12.18□□□□□ -0.46
PDLIM5-203ENST00000359265 C4orf45Q96LM5 186 aa12.18□□□□□ -0.46
PDLIM5-203ENST00000359265 FOXB1Q99853 325 aa12.18□□□□□ -0.46
PDLIM5-203ENST00000359265 HDHD5Q9BXW7 423 aa12.18□□□□□ -0.46
PDLIM5-203ENST00000359265 NIPAL2Q9H841 368 aa12.18□□□□□ -0.46
PDLIM5-203ENST00000359265 SIAEQ9HAT2 523 aa12.18□□□□□ -0.46
PDLIM5-203ENST00000359265 SLC7A10Q9NS82 523 aa12.18□□□□□ -0.46
PDLIM5-203ENST00000359265 GALNT8Q9NY28 637 aa12.18□□□□□ -0.46
PDLIM5-203ENST00000359265 ZNF281Q9Y2X9 895 aa12.18□□□□□ -0.46
PDLIM5-203ENST00000359265 RPL36A-HNRNPH2H7BZ11 118 aa12.17□□□□□ -0.46
PDLIM5-203ENST00000359265 WISP2O76076 250 aa12.17□□□□□ -0.46
PDLIM5-203ENST00000359265 FARS2O95363 451 aaKnown RBP12.17□□□□□ -0.46
PDLIM5-203ENST00000359265 IL1AP01583 271 aa12.17□□□□□ -0.46
PDLIM5-203ENST00000359265 CST2P09228 141 aa12.17□□□□□ -0.46
PDLIM5-203ENST00000359265 GABRA1P14867 456 aa12.17□□□□□ -0.46
PDLIM5-203ENST00000359265 DCTDP32321 178 aa12.17□□□□□ -0.46
PDLIM5-203ENST00000359265 PTGER4P35408 488 aa12.17□□□□□ -0.46
PDLIM5-203ENST00000359265 SOX6P35712 828 aa12.17□□□□□ -0.46
PDLIM5-203ENST00000359265 CCR9P51686 369 aa12.17□□□□□ -0.46
PDLIM5-203ENST00000359265 TDGF1P3P51864 188 aa12.17□□□□□ -0.46
PDLIM5-203ENST00000359265 NANOS3P60323 173 aaKnown RBP12.17□□□□□ -0.46
PDLIM5-203ENST00000359265 GRB2P62993 217 aaKnown RBP12.17□□□□□ -0.46
PDLIM5-203ENST00000359265 LSAMPQ13449 338 aa12.17□□□□□ -0.46
PDLIM5-203ENST00000359265 NRN1LQ496H8 165 aa12.17□□□□□ -0.46
PDLIM5-203ENST00000359265 YIF1BQ5BJH7 314 aa12.17□□□□□ -0.46
PDLIM5-203ENST00000359265 OR2A2Q6IF42 318 aa12.17□□□□□ -0.46
PDLIM5-203ENST00000359265 NUFIP2Q7Z417 695 aaKnown RBP12.17□□□□□ -0.46
PDLIM5-203ENST00000359265 GJC3Q8NFK1 279 aa12.17□□□□□ -0.46
PDLIM5-203ENST00000359265 OR5AK2Q8NH90 309 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms