RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 TMEM183BQ1AE95 376 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 TMEM229BQ8NBD8 167 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 PLPP7Q8NBV4 271 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 KLK11Q9UBX7 282 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 KLK8O60259 260 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 CLEC3AO75596 197 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 MPC2O95563 127 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 HOXD4P09016 255 aaPredicted RBP5.56□□□□□ -1.52
VPS13B-203ENST00000358544 BLVRBP30043 206 aaPredicted RBP5.56□□□□□ -1.52
VPS13B-203ENST00000358544 PPP1CBP62140 327 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 ZNF761Q86XN6 746 aaPredicted RBP5.56□□□□□ -1.52
VPS13B-203ENST00000358544 PRRG4Q9BZD6 226 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 DDAH2O95865 285 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 ALOX5APP20292 161 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 HNRNPA2B1P22626 353 aaKnown RBP5.56□□□□□ -1.52
VPS13B-203ENST00000358544 ABCD3P28288 659 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 SPINT3P49223 89 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 ARV1Q9H2C2 271 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 HIPK2Q9H2X6 1198 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 NECAP2Q9NVZ3 263 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 RASL12Q9NYN1 266 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 C4AP0C0L4 1744 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 C4BP0C0L5 1744 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 RIMBP3CA6NJZ7 1639 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 RIMBP3BA6NNM3 1639 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 RIMBP3Q9UFD9 1639 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 C7orf77A4D0Y5 90 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 CLN5O75503 358 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 HEXAP06865 529 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 RGRP47804 291 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 KLF9Q13886 244 aaPredicted RBP5.56□□□□□ -1.52
VPS13B-203ENST00000358544 ERN2Q76MJ5 926 aaKnown RBP5.56□□□□□ -1.52
VPS13B-203ENST00000358544 OLIG3Q7RTU3 272 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 PRICKLE2Q7Z3G6 844 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 CMTM2Q8TAZ6 248 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 FOXN4Q96NZ1 517 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 DNAJB11Q9UBS4 358 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 CGGBP1Q9UFW8 167 aaPredicted RBP5.56□□□□□ -1.52
VPS13B-203ENST00000358544 CXCL2P19875 107 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 HOXA9P31269 272 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 VASPP50552 380 aaPredicted RBP5.56□□□□□ -1.52
VPS13B-203ENST00000358544 CRMP1Q14194 572 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 MMP21Q8N119 569 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 OR5L1Q8NGL2 311 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 PLA2G12AQ9BZM1 189 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 MIXL1Q9H2W2 232 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 PHF1O43189 567 aaPredicted RBP5.56□□□□□ -1.52
VPS13B-203ENST00000358544 DAOP14920 347 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 WASP42768 502 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 ACTR1AP61163 376 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 HLA-DRB3P79483 266 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 RPL24P83731 157 aaKnown RBP5.56□□□□□ -1.52
VPS13B-203ENST00000358544 SKP2Q13309 424 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 RTP2Q5QGT7 225 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 ZNF776Q68DI1 518 aaPredicted RBP5.56□□□□□ -1.52
VPS13B-203ENST00000358544 USP53Q70EK8 1073 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 GCNT2Q8N0V5 402 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 SNX22Q96L94 193 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 UBQLN4Q9NRR5 601 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 MTFP1Q9UDX5 166 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 LAMB4A4D0S4 1761 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 TMEM272A0A1B0GTI8 110 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 OR5H15A6NDH6 313 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 OR5H1A6NKK0 313 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 FTCDNL1E5RQL4 147 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 H0YIV9 168 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 SELPP16109 830 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 ZNF385BQ569K4 471 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 OR5AP2Q8NGF4 316 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 PRTFDC1Q9NRG1 225 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 CICQ96RK0 1608 aaPredicted RBP5.56□□□□□ -1.52
VPS13B-203ENST00000358544 SLC16A7O60669 478 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 GLCEO94923 617 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 TEAD1P28347 426 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 DUSP1P28562 367 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 RAB28P51157 221 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 MIDNQ504T8 468 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 KLHDC1Q8N7A1 406 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 MFSD9Q8NBP5 474 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 LHX4Q969G2 390 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 DAZAP1Q96EP5 407 aaKnown RBP5.56□□□□□ -1.52
VPS13B-203ENST00000358544 NMNAT3Q96T66 252 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 TRAPPC1Q9Y5R8 145 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 SIAH2O43255 324 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 YIF1AO95070 293 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 HBQ1P09105 142 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 SDHBP21912 280 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 S100A7P31151 101 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 ZNF280AP59817 542 aaPredicted RBP5.56□□□□□ -1.52
VPS13B-203ENST00000358544 SERTAD2Q14140 314 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 CDK5R1Q15078 307 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 RAB35Q15286 201 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 TEX30Q5JUR7 227 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 SIRT6Q8N6T7 355 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 SLC24A4Q8NFF2 622 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 ZNF480Q8WV37 535 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 RGPD8O14715 1765 aaPredicted RBP5.56□□□□□ -1.52
VPS13B-203ENST00000358544 A0A1B0GTL3 188 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 ZNF840PA6NDX5 716 aa5.56□□□□□ -1.52
VPS13B-203ENST00000358544 MOB1BQ7L9L4 216 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms