RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 IGF2P01344 180 aa12.79□□□□□ -0.36
SREBF1-202ENST00000355815 CD38P28907 300 aa12.79□□□□□ -0.36
SREBF1-202ENST00000355815 SLC36A2Q495M3 483 aa12.79□□□□□ -0.36
SREBF1-202ENST00000355815 BAP18Q8IXM2 172 aa12.79□□□□□ -0.36
SREBF1-202ENST00000355815 FAM24BQ8N5W8 94 aa12.79□□□□□ -0.36
SREBF1-202ENST00000355815 MORN4Q8NDC4 146 aa12.79□□□□□ -0.36
SREBF1-202ENST00000355815 OR56B2PQ8NGI1 322 aa12.79□□□□□ -0.36
SREBF1-202ENST00000355815 OR10D4PQ8NGN7 298 aa12.79□□□□□ -0.36
SREBF1-202ENST00000355815 NUDCD2Q8WVJ2 157 aa12.79□□□□□ -0.36
SREBF1-202ENST00000355815 MRPL38Q96DV4 380 aaKnown RBP12.79□□□□□ -0.36
SREBF1-202ENST00000355815 MALSU1Q96EH3 234 aa12.79□□□□□ -0.36
SREBF1-202ENST00000355815 SLC19A3Q9BZV2 496 aa12.79□□□□□ -0.36
SREBF1-202ENST00000355815 C12orf10Q9HB07 376 aa12.79□□□□□ -0.36
SREBF1-202ENST00000355815 OR5K3A6NET4 321 aa12.78□□□□□ -0.36
SREBF1-202ENST00000355815 NPIPB8E9PQR5 432 aa12.78□□□□□ -0.36
SREBF1-202ENST00000355815 CTSBP07858 339 aa12.78□□□□□ -0.36
SREBF1-202ENST00000355815 SLC35E2P0CK97 266 aa12.78□□□□□ -0.36
SREBF1-202ENST00000355815 SLC2A1P11166 492 aa12.78□□□□□ -0.36
SREBF1-202ENST00000355815 EPXP11678 715 aa12.78□□□□□ -0.36
SREBF1-202ENST00000355815 HYAL1Q12794 435 aa12.78□□□□□ -0.36
SREBF1-202ENST00000355815 SNIP1Q8TAD8 396 aaKnown RBP12.78□□□□□ -0.36
SREBF1-202ENST00000355815 HINT2Q9BX68 163 aa12.78□□□□□ -0.36
SREBF1-202ENST00000355815 SERINC1Q9NRX5 453 aa12.78□□□□□ -0.36
SREBF1-202ENST00000355815 IL20Q9NYY1 176 aa12.78□□□□□ -0.36
SREBF1-202ENST00000355815 PTPRDP23468 1912 aa12.78□□□□□ -0.36
SREBF1-202ENST00000355815 C5orf42Q9H799 3197 aa12.78□□□□□ -0.36
SREBF1-202ENST00000355815 HEXBP07686 556 aa12.78□□□□□ -0.36
SREBF1-202ENST00000355815 RPA2P15927 270 aa12.78□□□□□ -0.36
SREBF1-202ENST00000355815 OR1D5P58170 312 aa12.78□□□□□ -0.36
SREBF1-202ENST00000355815 COL19A1Q14993 1142 aa12.78□□□□□ -0.36
SREBF1-202ENST00000355815 MANEAQ5SRI9 462 aa12.78□□□□□ -0.36
SREBF1-202ENST00000355815 CST9LP1Q5W188 147 aa12.78□□□□□ -0.36
SREBF1-202ENST00000355815 FBXW12Q6X9E4 464 aa12.78□□□□□ -0.36
SREBF1-202ENST00000355815 C16orf47Q6ZP98 133 aaPredicted RBP12.78□□□□□ -0.36
SREBF1-202ENST00000355815 ACOT7LQ6ZUV0 252 aa12.78□□□□□ -0.36
SREBF1-202ENST00000355815 ZNF695Q8IW36 515 aa12.78□□□□□ -0.36
SREBF1-202ENST00000355815 ZNF611Q8N823 705 aa12.78□□□□□ -0.36
SREBF1-202ENST00000355815 BAHD1Q8TBE0 780 aaPredicted RBP12.78□□□□□ -0.36
SREBF1-202ENST00000355815 DAZLQ92904 295 aaKnown RBP12.78□□□□□ -0.36
SREBF1-202ENST00000355815 DUSP22Q9NRW4 184 aa12.78□□□□□ -0.36
SREBF1-202ENST00000355815 ZFP92A6NM28 416 aa12.78□□□□□ -0.36
SREBF1-202ENST00000355815 HTTP42858 3142 aa12.78□□□□□ -0.36
SREBF1-202ENST00000355815 C21orf58P58505 322 aa12.78□□□□□ -0.36
SREBF1-202ENST00000355815 TAS2R31P59538 309 aa12.78□□□□□ -0.36
SREBF1-202ENST00000355815 RPS18P62269 152 aaKnown RBP12.78□□□□□ -0.36
SREBF1-202ENST00000355815 DUSP8Q13202 625 aa12.78□□□□□ -0.36
SREBF1-202ENST00000355815 TMEM65Q6PI78 240 aa12.78□□□□□ -0.36
SREBF1-202ENST00000355815 NECAP1Q8NC96 275 aa12.78□□□□□ -0.36
SREBF1-202ENST00000355815 OR4D9Q8NGE8 314 aa12.78□□□□□ -0.36
SREBF1-202ENST00000355815 PATJQ8NI35 1801 aa12.78□□□□□ -0.36
SREBF1-202ENST00000355815 MRI1Q9BV20 369 aa12.78□□□□□ -0.36
SREBF1-202ENST00000355815 UBQLN4Q9NRR5 601 aa12.78□□□□□ -0.36
SREBF1-202ENST00000355815 TSC2P49815 1807 aa12.77□□□□□ -0.36
SREBF1-202ENST00000355815 RANBP2P49792 3224 aaKnown RBP12.77□□□□□ -0.36
SREBF1-202ENST00000355815 MEIKINA0A087WXM9 373 aa12.77□□□□□ -0.36
SREBF1-202ENST00000355815 IFITM5A6NNB3 132 aa12.77□□□□□ -0.36
SREBF1-202ENST00000355815 SEMG1P04279 462 aa12.77□□□□□ -0.36
SREBF1-202ENST00000355815 ADRA2AP08913 450 aa12.77□□□□□ -0.36
SREBF1-202ENST00000355815 CD63P08962 238 aa12.77□□□□□ -0.36
SREBF1-202ENST00000355815 OR4E1P0C645 316 aa12.77□□□□□ -0.36
SREBF1-202ENST00000355815 MNX1P50219 401 aaPredicted RBP12.77□□□□□ -0.36
SREBF1-202ENST00000355815 PRPS1P60891 318 aa12.77□□□□□ -0.36
SREBF1-202ENST00000355815 HNRNPKP61978 463 aaKnown RBP eCLIP12.77□□□□□ -0.361e-7■■■□□ 16.4
SREBF1-202ENST00000355815 GSG1Q2KHT4 349 aa12.77□□□□□ -0.36
SREBF1-202ENST00000355815 FAM209BQ5JX69 171 aa12.77□□□□□ -0.36
SREBF1-202ENST00000355815 MAMSTRQ6ZN01 415 aa12.77□□□□□ -0.36
SREBF1-202ENST00000355815 TERB2Q8NHR7 220 aa12.77□□□□□ -0.36
SREBF1-202ENST00000355815 NUBPLQ8TB37 319 aa12.77□□□□□ -0.36
SREBF1-202ENST00000355815 SFT2D1Q8WV19 159 aa12.77□□□□□ -0.36
SREBF1-202ENST00000355815 WDFY2Q96P53 400 aa12.77□□□□□ -0.36
SREBF1-202ENST00000355815 NXF2Q9GZY0 626 aaKnown RBP12.77□□□□□ -0.36
SREBF1-202ENST00000355815 SLC25A19Q9HC21 320 aa12.77□□□□□ -0.36
SREBF1-202ENST00000355815 MED17Q9NVC6 651 aa12.77□□□□□ -0.36
SREBF1-202ENST00000355815 WBP1LQ9NX94 342 aa12.77□□□□□ -0.36
SREBF1-202ENST00000355815 KCND3Q9UK17 655 aa12.77□□□□□ -0.36
SREBF1-202ENST00000355815 EMC9Q9Y3B6 208 aa12.77□□□□□ -0.36
SREBF1-202ENST00000355815 A0A1B0GUH1 482 aa12.77□□□□□ -0.37
SREBF1-202ENST00000355815 IMPA2O14732 288 aa12.77□□□□□ -0.37
SREBF1-202ENST00000355815 SERPINA7P05543 415 aa12.77□□□□□ -0.37
SREBF1-202ENST00000355815 GABRG2P18507 467 aa12.77□□□□□ -0.37
SREBF1-202ENST00000355815 C19orf57Q0VDD7 668 aa12.77□□□□□ -0.37
SREBF1-202ENST00000355815 RNF212Q495C1 297 aa12.77□□□□□ -0.37
SREBF1-202ENST00000355815 RNLSQ5VYX0 342 aa12.77□□□□□ -0.37
SREBF1-202ENST00000355815 SLC2A12Q8TD20 617 aa12.77□□□□□ -0.37
SREBF1-202ENST00000355815 SMIM4Q8WVI0 70 aa12.77□□□□□ -0.37
SREBF1-202ENST00000355815 ZNF578Q96N58 590 aaPredicted RBP12.77□□□□□ -0.37
SREBF1-202ENST00000355815 NIPSNAP3BQ9BS92 247 aa12.77□□□□□ -0.37
SREBF1-202ENST00000355815 NICN1Q9BSH3 213 aa12.77□□□□□ -0.37
SREBF1-202ENST00000355815 MCOLN1Q9GZU1 580 aa12.77□□□□□ -0.37
SREBF1-202ENST00000355815 SLC25A32Q9H2D1 315 aa12.77□□□□□ -0.37
SREBF1-202ENST00000355815 BANF2Q9H503 90 aa12.77□□□□□ -0.37
SREBF1-202ENST00000355815 CMC2Q9NRP2 79 aa12.77□□□□□ -0.37
SREBF1-202ENST00000355815 TMEM74BQ9NUR3 256 aa12.77□□□□□ -0.37
SREBF1-202ENST00000355815 TRBV23-1A0A0A0MS06 115 aa12.77□□□□□ -0.37
SREBF1-202ENST00000355815 G3V3Y1 287 aa12.77□□□□□ -0.37
SREBF1-202ENST00000355815 ZNF264O43296 627 aa12.77□□□□□ -0.37
SREBF1-202ENST00000355815 TBX6O95947 436 aaPredicted RBP12.77□□□□□ -0.37
SREBF1-202ENST00000355815 QDPRP09417 244 aa12.77□□□□□ -0.37
SREBF1-202ENST00000355815 CTRB1P17538 263 aa12.77□□□□□ -0.37
SREBF1-202ENST00000355815 PTBP1P26599 531 aaKnown RBP eCLIP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms