RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 HSD11B1P28845 292 aa11.98□□□□□ -0.49
HOXA1-202ENST00000355633 DCTDP32321 178 aa11.98□□□□□ -0.49
HOXA1-202ENST00000355633 CCR9P51686 369 aa11.98□□□□□ -0.49
HOXA1-202ENST00000355633 RPS11P62280 158 aaKnown RBP eCLIP11.98□□□□□ -0.49
HOXA1-202ENST00000355633 MFGE8Q08431 387 aaPredicted RBP11.98□□□□□ -0.49
HOXA1-202ENST00000355633 FAPQ12884 760 aa11.98□□□□□ -0.49
HOXA1-202ENST00000355633 ZNF829Q3KNS6 432 aaPredicted RBP11.98□□□□□ -0.49
HOXA1-202ENST00000355633 NRN1LQ496H8 165 aa11.98□□□□□ -0.49
HOXA1-202ENST00000355633 NSUN5P2Q63ZY6 315 aa11.98□□□□□ -0.49
HOXA1-202ENST00000355633 OR2A2Q6IF42 318 aa11.98□□□□□ -0.49
HOXA1-202ENST00000355633 ZNF813Q6ZN06 617 aa11.98□□□□□ -0.49
HOXA1-202ENST00000355633 FAM214BQ7L5A3 538 aa11.98□□□□□ -0.49
HOXA1-202ENST00000355633 ABHD12BQ7Z5M8 362 aaPredicted RBP11.98□□□□□ -0.49
HOXA1-202ENST00000355633 CEACAM19Q7Z692 300 aa11.98□□□□□ -0.49
HOXA1-202ENST00000355633 ZNF676Q8N7Q3 588 aa11.98□□□□□ -0.49
HOXA1-202ENST00000355633 TEX19Q8NA77 164 aa11.98□□□□□ -0.49
HOXA1-202ENST00000355633 C9orf106Q8NAJ2 232 aa11.98□□□□□ -0.49
HOXA1-202ENST00000355633 FBXO17Q96EF6 278 aa11.98□□□□□ -0.49
HOXA1-202ENST00000355633 CCDC59Q9P031 241 aaKnown RBP11.98□□□□□ -0.49
HOXA1-202ENST00000355633 PRSS50Q9UI38 385 aa11.98□□□□□ -0.49
HOXA1-202ENST00000355633 CACNA1GO43497 2377 aa11.97□□□□□ -0.49
HOXA1-202ENST00000355633 NCOA6Q14686 2063 aaPredicted RBP11.97□□□□□ -0.49
HOXA1-202ENST00000355633 TMEM269A0A1B0GVZ9 245 aa11.97□□□□□ -0.49
HOXA1-202ENST00000355633 SRSF10O75494 262 aaKnown RBP11.97□□□□□ -0.49
HOXA1-202ENST00000355633 FARS2O95363 451 aaKnown RBP11.97□□□□□ -0.49
HOXA1-202ENST00000355633 IL1AP01583 271 aa11.97□□□□□ -0.49
HOXA1-202ENST00000355633 SDC2P34741 201 aa11.97□□□□□ -0.49
HOXA1-202ENST00000355633 SOX6P35712 828 aa11.97□□□□□ -0.49
HOXA1-202ENST00000355633 RPS19P39019 145 aaKnown RBP11.97□□□□□ -0.49
HOXA1-202ENST00000355633 KIR3DL2P43630 455 aa11.97□□□□□ -0.49
HOXA1-202ENST00000355633 OR3A2P47893 321 aa11.97□□□□□ -0.49
HOXA1-202ENST00000355633 HIST1H3AP68431 136 aa11.97□□□□□ -0.49
HOXA1-202ENST00000355633 HIST2H3PS2Q5TEC6 136 aa11.97□□□□□ -0.49
HOXA1-202ENST00000355633 C9orf135Q5VTT2 229 aa11.97□□□□□ -0.49
HOXA1-202ENST00000355633 HIST2H3AQ71DI3 136 aa11.97□□□□□ -0.49
HOXA1-202ENST00000355633 CATSPERDQ86XM0 798 aa11.97□□□□□ -0.49
HOXA1-202ENST00000355633 SLIRPQ9GZT3 109 aaKnown RBP11.97□□□□□ -0.49
HOXA1-202ENST00000355633 NIPAL2Q9H841 368 aa11.97□□□□□ -0.49
HOXA1-202ENST00000355633 SNTG1Q9NSN8 517 aa11.97□□□□□ -0.49
HOXA1-202ENST00000355633 EMC9Q9Y3B6 208 aa11.97□□□□□ -0.49
HOXA1-202ENST00000355633 GTF3C1Q12789 2109 aa11.97□□□□□ -0.49
HOXA1-202ENST00000355633 FREM1Q5H8C1 2179 aa11.97□□□□□ -0.49
HOXA1-202ENST00000355633 IGF2RP11717 2491 aa11.97□□□□□ -0.49
HOXA1-202ENST00000355633 TMEM8BA6NDV4 472 aa11.96□□□□□ -0.49
HOXA1-202ENST00000355633 WDR1O75083 606 aa11.96□□□□□ -0.49
HOXA1-202ENST00000355633 GATBO75879 557 aaKnown RBP11.96□□□□□ -0.49
HOXA1-202ENST00000355633 CLPXO76031 633 aa11.96□□□□□ -0.49
HOXA1-202ENST00000355633 MMP16P51512 607 aa11.96□□□□□ -0.49
HOXA1-202ENST00000355633 TDGF1P3P51864 188 aa11.96□□□□□ -0.49
HOXA1-202ENST00000355633 GRB2P62993 217 aaKnown RBP11.96□□□□□ -0.49
HOXA1-202ENST00000355633 ARF1P84077 181 aaKnown RBP11.96□□□□□ -0.49
HOXA1-202ENST00000355633 MXD1Q05195 221 aa11.96□□□□□ -0.49
HOXA1-202ENST00000355633 DYNC1I2Q13409 638 aaKnown RBP11.96□□□□□ -0.49
HOXA1-202ENST00000355633 GUSBP1Q15486 140 aa11.96□□□□□ -0.49
HOXA1-202ENST00000355633 ODF4Q2M2E3 257 aa11.96□□□□□ -0.49
HOXA1-202ENST00000355633 ZMAT1Q5H9K5 638 aa11.96□□□□□ -0.49
HOXA1-202ENST00000355633 FBXW9Q5XUX1 488 aa11.96□□□□□ -0.49
HOXA1-202ENST00000355633 PAMR1Q6UXH9 720 aa11.96□□□□□ -0.49
HOXA1-202ENST00000355633 IL17RDQ8NFM7 739 aa11.96□□□□□ -0.49
HOXA1-202ENST00000355633 RGP1Q92546 391 aaPredicted RBP11.96□□□□□ -0.49
HOXA1-202ENST00000355633 MED18Q9BUE0 208 aa11.96□□□□□ -0.49
HOXA1-202ENST00000355633 DDX28Q9NUL7 540 aaKnown RBP11.96□□□□□ -0.49
HOXA1-202ENST00000355633 MALT1Q9UDY8 824 aa11.96□□□□□ -0.49
HOXA1-202ENST00000355633 OR52A1Q9UKL2 312 aa11.96□□□□□ -0.49
HOXA1-202ENST00000355633 SLC22A13Q9Y226 551 aa11.96□□□□□ -0.49
HOXA1-202ENST00000355633 SLC5A6Q9Y289 635 aa11.96□□□□□ -0.49
HOXA1-202ENST00000355633 FIGNL2A6NMB9 653 aa11.96□□□□□ -0.5
HOXA1-202ENST00000355633 CASKO14936 926 aa11.96□□□□□ -0.5
HOXA1-202ENST00000355633 ABOP16442 354 aa11.96□□□□□ -0.5
HOXA1-202ENST00000355633 PTGER4P35408 488 aa11.96□□□□□ -0.5
HOXA1-202ENST00000355633 RANBP1P43487 201 aa11.96□□□□□ -0.5
HOXA1-202ENST00000355633 FOXG1P55316 489 aaPredicted RBP11.96□□□□□ -0.5
HOXA1-202ENST00000355633 SCRN3Q0VDG4 424 aa11.96□□□□□ -0.5
HOXA1-202ENST00000355633 CCDC92Q53HC0 331 aaPredicted RBP11.96□□□□□ -0.5
HOXA1-202ENST00000355633 ELFN2Q5R3F8 820 aa11.96□□□□□ -0.5
HOXA1-202ENST00000355633 FAM27D1Q5T7N8 215 aa11.96□□□□□ -0.5
HOXA1-202ENST00000355633 SLC16A14Q7RTX9 510 aa11.96□□□□□ -0.5
HOXA1-202ENST00000355633 CD163Q86VB7 1156 aa11.96□□□□□ -0.5
HOXA1-202ENST00000355633 FAM57AQ8TBR7 257 aa11.96□□□□□ -0.5
HOXA1-202ENST00000355633 PPP1R14AQ96A00 147 aa11.96□□□□□ -0.5
HOXA1-202ENST00000355633 SNRNP40Q96DI7 357 aaKnown RBP11.96□□□□□ -0.5
HOXA1-202ENST00000355633 OR14A2Q96R54 314 aa11.96□□□□□ -0.5
HOXA1-202ENST00000355633 ATF6BQ99941 703 aa11.96□□□□□ -0.5
HOXA1-202ENST00000355633 TPK1Q9H3S4 243 aa11.96□□□□□ -0.5
HOXA1-202ENST00000355633 BRD7Q9NPI1 651 aa11.96□□□□□ -0.5
HOXA1-202ENST00000355633 PLEK2Q9NYT0 353 aa11.96□□□□□ -0.5
HOXA1-202ENST00000355633 PMF1-BGLAPU3KQ54 211 aa11.96□□□□□ -0.5
HOXA1-202ENST00000355633 MBD3L4A6NDZ8 208 aaPredicted RBP11.95□□□□□ -0.5
HOXA1-202ENST00000355633 MBD3L3A6NE82 208 aaPredicted RBP11.95□□□□□ -0.5
HOXA1-202ENST00000355633 MBD3L5A6NJ08 208 aaPredicted RBP11.95□□□□□ -0.5
HOXA1-202ENST00000355633 ZNF879B4DU55 563 aa11.95□□□□□ -0.5
HOXA1-202ENST00000355633 CLEC2LP0C7M8 214 aa11.95□□□□□ -0.5
HOXA1-202ENST00000355633 MYL9P24844 172 aa11.95□□□□□ -0.5
HOXA1-202ENST00000355633 RORCP51449 518 aa11.95□□□□□ -0.5
HOXA1-202ENST00000355633 PRKXP51817 358 aa11.95□□□□□ -0.5
HOXA1-202ENST00000355633 PSMA6P60900 246 aaKnown RBP11.95□□□□□ -0.5
HOXA1-202ENST00000355633 PCBD1P61457 104 aa11.95□□□□□ -0.5
HOXA1-202ENST00000355633 C1orf185Q5T7R7 199 aa11.95□□□□□ -0.5
HOXA1-202ENST00000355633 UNQ9370/PRO34162Q6UXP9 181 aa11.95□□□□□ -0.5
HOXA1-202ENST00000355633 ZNF627Q7L945 461 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms