RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 DOK3Q7L591 496 aa16.48■□□□□ 0.23
SMC4-201ENST00000344722 SLC39A11Q8N1S5 342 aa16.48■□□□□ 0.23
SMC4-201ENST00000344722 NUDCD2Q8WVJ2 157 aa16.48■□□□□ 0.23
SMC4-201ENST00000344722 ARHGDIGQ99819 225 aa16.48■□□□□ 0.23
SMC4-201ENST00000344722 RARRES3Q9UL19 164 aa16.48■□□□□ 0.23
SMC4-201ENST00000344722 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.48■□□□□ 0.23
SMC4-201ENST00000344722 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.48■□□□□ 0.23
SMC4-201ENST00000344722 CTDSPLO15194 276 aa16.48■□□□□ 0.23
SMC4-201ENST00000344722 FCMRO60667 390 aa16.48■□□□□ 0.23
SMC4-201ENST00000344722 SCGB2A1O75556 95 aa16.48■□□□□ 0.23
SMC4-201ENST00000344722 CST4P01036 141 aa16.48■□□□□ 0.23
SMC4-201ENST00000344722 ERV3-1Q14264 604 aa16.48■□□□□ 0.23
SMC4-201ENST00000344722 IRF3Q14653 427 aa16.48■□□□□ 0.23
SMC4-201ENST00000344722 TMEM164Q5U3C3 297 aa16.48■□□□□ 0.23
SMC4-201ENST00000344722 OR52W1Q6IF63 320 aa16.48■□□□□ 0.23
SMC4-201ENST00000344722 TMEM123Q8N131 208 aa16.48■□□□□ 0.23
SMC4-201ENST00000344722 DEFB119Q8N690 84 aa16.48■□□□□ 0.23
SMC4-201ENST00000344722 OR14A16Q8NHC5 309 aa16.48■□□□□ 0.23
SMC4-201ENST00000344722 PPP1R35Q8TAP8 253 aa16.48■□□□□ 0.23
SMC4-201ENST00000344722 ARRDC3Q96B67 414 aa16.48■□□□□ 0.23
SMC4-201ENST00000344722 MTFP1Q9UDX5 166 aa16.48■□□□□ 0.23
SMC4-201ENST00000344722 SERTM1A2A2V5 107 aa16.48■□□□□ 0.23
SMC4-201ENST00000344722 JMJD7P0C870 316 aa16.48■□□□□ 0.23
SMC4-201ENST00000344722 FABP4P15090 132 aa16.48■□□□□ 0.23
SMC4-201ENST00000344722 RAB5AP20339 215 aa16.48■□□□□ 0.23
SMC4-201ENST00000344722 IFITM2Q01629 132 aa16.48■□□□□ 0.23
SMC4-201ENST00000344722 ENDOGQ14249 297 aaKnown RBP16.48■□□□□ 0.23
SMC4-201ENST00000344722 PHYHD1Q5SRE7 291 aa16.48■□□□□ 0.23
SMC4-201ENST00000344722 RXFP4Q8TDU9 374 aa16.48■□□□□ 0.23
SMC4-201ENST00000344722 LCORQ96JN0 433 aaPredicted RBP16.48■□□□□ 0.23
SMC4-201ENST00000344722 ZNF75AQ96N20 296 aa16.48■□□□□ 0.23
SMC4-201ENST00000344722 KCNIP2Q9NS61 270 aa16.48■□□□□ 0.23
SMC4-201ENST00000344722 G0S2P27469 103 aa16.48■□□□□ 0.23
SMC4-201ENST00000344722 MVDP53602 400 aa16.48■□□□□ 0.23
SMC4-201ENST00000344722 ZNF79Q15937 498 aa16.48■□□□□ 0.23
SMC4-201ENST00000344722 TRMT12Q53H54 448 aaKnown RBP16.48■□□□□ 0.23
SMC4-201ENST00000344722 OR11H7Q8NGC8 314 aa16.48■□□□□ 0.23
SMC4-201ENST00000344722 NPAS1Q99742 590 aa16.48■□□□□ 0.23
SMC4-201ENST00000344722 C8orf33Q9H7E9 229 aaPredicted RBP16.48■□□□□ 0.23
SMC4-201ENST00000344722 A0A087WV62 115 aa16.47■□□□□ 0.23
SMC4-201ENST00000344722 CDC14CA4D256 554 aa16.47■□□□□ 0.23
SMC4-201ENST00000344722 SEMA4FO95754 770 aa16.47■□□□□ 0.23
SMC4-201ENST00000344722 GUCA2AQ02747 115 aa16.47■□□□□ 0.23
SMC4-201ENST00000344722 LDLRAD1Q5T700 205 aa16.47■□□□□ 0.23
SMC4-201ENST00000344722 PLPP6Q8IY26 295 aa16.47■□□□□ 0.23
SMC4-201ENST00000344722 MOB1AQ9H8S9 216 aa16.47■□□□□ 0.23
SMC4-201ENST00000344722 TMEM218A2RU14 115 aa16.47■□□□□ 0.23
SMC4-201ENST00000344722 ZNF85Q03923 595 aa16.47■□□□□ 0.23
SMC4-201ENST00000344722 MANEAQ5SRI9 462 aa16.47■□□□□ 0.23
SMC4-201ENST00000344722 HSD17B8Q92506 261 aa16.47■□□□□ 0.23
SMC4-201ENST00000344722 AP4M1O00189 453 aa16.47■□□□□ 0.23
SMC4-201ENST00000344722 SLC17A2O00624 439 aa16.47■□□□□ 0.23
SMC4-201ENST00000344722 SCAND1P57086 179 aa16.47■□□□□ 0.23
SMC4-201ENST00000344722 SSX7Q7RTT5 188 aa16.47■□□□□ 0.23
SMC4-201ENST00000344722 SLC22A12Q96S37 553 aa16.47■□□□□ 0.23
SMC4-201ENST00000344722 ABHD1Q96SE0 405 aa16.47■□□□□ 0.23
SMC4-201ENST00000344722 OR14J1Q9UGF5 321 aa16.47■□□□□ 0.23
SMC4-201ENST00000344722 APOA2P02652 100 aa16.47■□□□□ 0.23
SMC4-201ENST00000344722 GNB3P16520 340 aa16.47■□□□□ 0.23
SMC4-201ENST00000344722 NHLRC1Q6VVB1 395 aa16.47■□□□□ 0.23
SMC4-201ENST00000344722 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.47■□□□□ 0.237e-9■■■■■ 49
SMC4-201ENST00000344722 TMPRSS7Q7RTY8 843 aa16.47■□□□□ 0.23
SMC4-201ENST00000344722 OR13D1Q8NGV5 346 aa16.47■□□□□ 0.23
SMC4-201ENST00000344722 ORAI1Q96D31 301 aa16.47■□□□□ 0.23
SMC4-201ENST00000344722 CAPNS2Q96L46 248 aa16.47■□□□□ 0.23
SMC4-201ENST00000344722 CDH20Q9HBT6 801 aa16.47■□□□□ 0.23
SMC4-201ENST00000344722 HCFC1R1Q9NWW0 138 aa16.47■□□□□ 0.23
SMC4-201ENST00000344722 INSL4Q14641 139 aa16.46■□□□□ 0.23
SMC4-201ENST00000344722 OR2G2Q8NGZ5 317 aa16.46■□□□□ 0.23
SMC4-201ENST00000344722 STT3BQ8TCJ2 826 aa16.46■□□□□ 0.23
SMC4-201ENST00000344722 WFDC5Q8TCV5 224 aa16.46■□□□□ 0.23
SMC4-201ENST00000344722 SUCNR1Q9BXA5 334 aa16.46■□□□□ 0.23
SMC4-201ENST00000344722 FBXO4Q9UKT5 387 aa16.46■□□□□ 0.23
SMC4-201ENST00000344722 POMT1Q9Y6A1 747 aa16.46■□□□□ 0.23
SMC4-201ENST00000344722 ANKRD20A5PA0PJZ0 165 aa16.46■□□□□ 0.23
SMC4-201ENST00000344722 CXCL3P19876 107 aa16.46■□□□□ 0.23
SMC4-201ENST00000344722 UBE2NP61088 152 aaKnown RBP16.46■□□□□ 0.23
SMC4-201ENST00000344722 NTHL1P78549 312 aa16.46■□□□□ 0.23
SMC4-201ENST00000344722 SMAD2Q15796 467 aaKnown RBP16.46■□□□□ 0.23
SMC4-201ENST00000344722 BARHL1Q9BZE3 327 aa16.46■□□□□ 0.23
SMC4-201ENST00000344722 TCRBV16S1A1N1A0A5B0 115 aa16.46■□□□□ 0.23
SMC4-201ENST00000344722 GSTP1P09211 210 aaKnown RBP16.46■□□□□ 0.23
SMC4-201ENST00000344722 IKZF1Q13422 519 aa16.46■□□□□ 0.23
SMC4-201ENST00000344722 TMEM52BQ4KMG9 183 aa16.46■□□□□ 0.23
SMC4-201ENST00000344722 C1orf140Q5VVS0 124 aa16.46■□□□□ 0.23
SMC4-201ENST00000344722 TRILQ7L0X0 811 aa16.46■□□□□ 0.23
SMC4-201ENST00000344722 LRRC18Q8N456 261 aa16.46■□□□□ 0.23
SMC4-201ENST00000344722 C12orf76Q8N812 135 aaPredicted RBP16.46■□□□□ 0.23
SMC4-201ENST00000344722 ACKR3P25106 362 aa16.46■□□□□ 0.23
SMC4-201ENST00000344722 MSX1P28360 303 aa16.46■□□□□ 0.23
SMC4-201ENST00000344722 IL2RGP31785 369 aa16.46■□□□□ 0.23
SMC4-201ENST00000344722 SLC17A1Q14916 467 aa16.46■□□□□ 0.23
SMC4-201ENST00000344722 Q6ZSR6 202 aa16.46■□□□□ 0.23
SMC4-201ENST00000344722 TMEM30AQ9NV96 361 aa16.46■□□□□ 0.23
SMC4-201ENST00000344722 ZNF586Q9NXT0 402 aa16.46■□□□□ 0.23
SMC4-201ENST00000344722 PEX11BO96011 259 aa16.46■□□□□ 0.22
SMC4-201ENST00000344722 F11P03951 625 aa16.46■□□□□ 0.22
SMC4-201ENST00000344722 AVPR2P30518 371 aa16.46■□□□□ 0.22
SMC4-201ENST00000344722 RFC3P40938 356 aa16.46■□□□□ 0.22
SMC4-201ENST00000344722 KCNJ3P48549 501 aa16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms