RNA–Protein interactions for RNA: ENST00000344140.5

CACNB1-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene CACNB1, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-201ENST00000344140 LINGO2Q7L985 606 aa19.4■□□□□ 0.7
CACNB1-201ENST00000344140 P4HA3Q7Z4N8 544 aa19.4■□□□□ 0.7
CACNB1-201ENST00000344140 GPR148Q8TDV2 347 aa19.4■□□□□ 0.7
CACNB1-201ENST00000344140 S100ZQ8WXG8 99 aa19.4■□□□□ 0.7
CACNB1-201ENST00000344140 RGP1Q92546 391 aaPredicted RBP19.4■□□□□ 0.7
CACNB1-201ENST00000344140 AP3S1Q92572 193 aa19.4■□□□□ 0.7
CACNB1-201ENST00000344140 EXTL1Q92935 676 aa19.4■□□□□ 0.7
CACNB1-201ENST00000344140 FOXB1Q99853 325 aa19.4■□□□□ 0.7
CACNB1-201ENST00000344140 PPIL3Q9H2H8 161 aaKnown RBP19.4■□□□□ 0.7
CACNB1-201ENST00000344140 CLCF1Q9UBD9 225 aa19.4■□□□□ 0.7
CACNB1-201ENST00000344140 FBXL3Q9UKT7 428 aa19.4■□□□□ 0.7
CACNB1-201ENST00000344140 GTF2A1LQ9UNN4 478 aa19.4■□□□□ 0.7
CACNB1-201ENST00000344140 EMC9Q9Y3B6 208 aa19.4■□□□□ 0.7
CACNB1-201ENST00000344140 PEX16Q9Y5Y5 336 aa19.4■□□□□ 0.7
CACNB1-201ENST00000344140 PHF3Q92576 2039 aaKnown RBP19.4■□□□□ 0.7
CACNB1-201ENST00000344140 ANKRD11Q6UB99 2663 aaPredicted RBP19.39■□□□□ 0.7
CACNB1-201ENST00000344140 IQCMA0A1B0GVH7 501 aa19.39■□□□□ 0.7
CACNB1-201ENST00000344140 TMEM269A0A1B0GVZ9 245 aa19.39■□□□□ 0.7
CACNB1-201ENST00000344140 SHISA3A0PJX4 238 aa19.39■□□□□ 0.7
CACNB1-201ENST00000344140 RPL36A-HNRNPH2H7BZ11 118 aa19.39■□□□□ 0.7
CACNB1-201ENST00000344140 BMXP51813 675 aa19.39■□□□□ 0.7
CACNB1-201ENST00000344140 MFGE8Q08431 387 aaPredicted RBP19.39■□□□□ 0.7
CACNB1-201ENST00000344140 FAM27D1Q5T7N8 215 aa19.39■□□□□ 0.7
CACNB1-201ENST00000344140 IL17RDQ8NFM7 739 aa19.39■□□□□ 0.7
CACNB1-201ENST00000344140 SNRNP27Q8WVK2 155 aaKnown RBP19.39■□□□□ 0.7
CACNB1-201ENST00000344140 PNRC2Q9NPJ4 139 aaKnown RBP19.39■□□□□ 0.7
CACNB1-201ENST00000344140 TP53TG5Q9Y2B4 290 aa19.39■□□□□ 0.7
CACNB1-201ENST00000344140 TRBV5-5A0A0J9YX44 114 aa19.39■□□□□ 0.69
CACNB1-201ENST00000344140 VGLL3A8MV65 326 aa19.39■□□□□ 0.69
CACNB1-201ENST00000344140 CST2P09228 141 aa19.39■□□□□ 0.69
CACNB1-201ENST00000344140 S100A5P33763 92 aa19.39■□□□□ 0.69
CACNB1-201ENST00000344140 GRB2P62993 217 aaKnown RBP19.39■□□□□ 0.69
CACNB1-201ENST00000344140 HIST1H3AP68431 136 aa19.39■□□□□ 0.69
CACNB1-201ENST00000344140 DYNC1I2Q13409 638 aaKnown RBP19.39■□□□□ 0.69
CACNB1-201ENST00000344140 HIST2H3PS2Q5TEC6 136 aa19.39■□□□□ 0.69
CACNB1-201ENST00000344140 HIST2H3AQ71DI3 136 aa19.39■□□□□ 0.69
CACNB1-201ENST00000344140 LRRC18Q8N456 261 aa19.39■□□□□ 0.69
CACNB1-201ENST00000344140 GMPPAQ96IJ6 420 aaPredicted RBP19.39■□□□□ 0.69
CACNB1-201ENST00000344140 SLC7A10Q9NS82 523 aa19.39■□□□□ 0.69
CACNB1-201ENST00000344140 DMXL2Q8TDJ6 3036 aa19.38■□□□□ 0.69
CACNB1-201ENST00000344140 ZNF587BE7ETH6 402 aa19.38■□□□□ 0.69
CACNB1-201ENST00000344140 WISP2O76076 250 aa19.38■□□□□ 0.69
CACNB1-201ENST00000344140 OCM2P0CE71 109 aa19.38■□□□□ 0.69
CACNB1-201ENST00000344140 HSD11B1P28845 292 aa19.38■□□□□ 0.69
CACNB1-201ENST00000344140 HSD17B12Q53GQ0 312 aa19.38■□□□□ 0.69
CACNB1-201ENST00000344140 ZC3HAV1Q7Z2W4 902 aaKnown RBP19.38■□□□□ 0.69
CACNB1-201ENST00000344140 ZNF100Q8IYN0 542 aa19.38■□□□□ 0.69
CACNB1-201ENST00000344140 DERL3Q96Q80 235 aa19.38■□□□□ 0.69
CACNB1-201ENST00000344140 HMG20AQ9NP66 347 aa19.38■□□□□ 0.69
CACNB1-201ENST00000344140 DDX28Q9NUL7 540 aaKnown RBP19.38■□□□□ 0.69
CACNB1-201ENST00000344140 OR52A1Q9UKL2 312 aa19.38■□□□□ 0.69
CACNB1-201ENST00000344140 SLC22A13Q9Y226 551 aa19.38■□□□□ 0.69
CACNB1-201ENST00000344140 AHRRA9YTQ3 701 aa19.37■□□□□ 0.69
CACNB1-201ENST00000344140 CFL1P23528 166 aaKnown RBP19.37■□□□□ 0.69
CACNB1-201ENST00000344140 AGTR1P30556 359 aa19.37■□□□□ 0.69
CACNB1-201ENST00000344140 ZNF704Q6ZNC4 412 aaPredicted RBP19.37■□□□□ 0.69
CACNB1-201ENST00000344140 CROCCP3Q8IVE0 287 aa19.37■□□□□ 0.69
CACNB1-201ENST00000344140 KCNS3Q9BQ31 491 aa19.37■□□□□ 0.69
CACNB1-201ENST00000344140 WACQ9BTA9 647 aa19.37■□□□□ 0.69
CACNB1-201ENST00000344140 MOB1AQ9H8S9 216 aa19.37■□□□□ 0.69
CACNB1-201ENST00000344140 G6PC2Q9NQR9 355 aa19.37■□□□□ 0.69
CACNB1-201ENST00000344140 UPB1Q9UBR1 384 aa19.37■□□□□ 0.69
CACNB1-201ENST00000344140 PLEKHB1Q9UF11 243 aaPredicted RBP19.37■□□□□ 0.69
CACNB1-201ENST00000344140 CLDN25C9JDP6 229 aa19.37■□□□□ 0.69
CACNB1-201ENST00000344140 RAF1P04049 648 aa19.37■□□□□ 0.69
CACNB1-201ENST00000344140 B4GALT1P15291 398 aa19.37■□□□□ 0.69
CACNB1-201ENST00000344140 PSMA6P60900 246 aaKnown RBP19.37■□□□□ 0.69
CACNB1-201ENST00000344140 BCL2L15Q5TBC7 163 aa19.37■□□□□ 0.69
CACNB1-201ENST00000344140 SYT9Q86SS6 491 aa19.37■□□□□ 0.69
CACNB1-201ENST00000344140 SLC22A24Q8N4F4 322 aa19.37■□□□□ 0.69
CACNB1-201ENST00000344140 TRIB1Q96RU8 372 aa19.37■□□□□ 0.69
CACNB1-201ENST00000344140 SMURF1Q9HCE7 757 aa19.37■□□□□ 0.69
CACNB1-201ENST00000344140 NOX4Q9NPH5 578 aa19.37■□□□□ 0.69
CACNB1-201ENST00000344140 FAM206AQ9NX38 181 aa19.37■□□□□ 0.69
CACNB1-201ENST00000344140 SS18L1O75177 396 aaPredicted RBP19.36■□□□□ 0.69
CACNB1-201ENST00000344140 FARS2O95363 451 aaKnown RBP19.36■□□□□ 0.69
CACNB1-201ENST00000344140 IGHV3-9P01782 118 aa19.36■□□□□ 0.69
CACNB1-201ENST00000344140 ISG15P05161 165 aa19.36■□□□□ 0.69
CACNB1-201ENST00000344140 CTSSP25774 331 aa19.36■□□□□ 0.69
CACNB1-201ENST00000344140 PCBD1P61457 104 aa19.36■□□□□ 0.69
CACNB1-201ENST00000344140 SF3B4Q15427 424 aaKnown RBP eCLIP19.36■□□□□ 0.69
CACNB1-201ENST00000344140 NUFIP2Q7Z417 695 aaKnown RBP19.36■□□□□ 0.69
CACNB1-201ENST00000344140 ABHD12BQ7Z5M8 362 aaPredicted RBP19.36■□□□□ 0.69
CACNB1-201ENST00000344140 FBXO17Q96EF6 278 aa19.36■□□□□ 0.69
CACNB1-201ENST00000344140 GPR137Q96N19 417 aa19.36■□□□□ 0.69
CACNB1-201ENST00000344140 ATF6BQ99941 703 aa19.36■□□□□ 0.69
CACNB1-201ENST00000344140 WDR12Q9GZL7 423 aaKnown RBP19.36■□□□□ 0.69
CACNB1-201ENST00000344140 AKIP1Q9NQ31 210 aa19.36■□□□□ 0.69
CACNB1-201ENST00000344140 PTPRQQ9UMZ3 2332 aa19.36■□□□□ 0.69
CACNB1-201ENST00000344140 CACNA1GO43497 2377 aa19.36■□□□□ 0.69
CACNB1-201ENST00000344140 A0A1W2PPK0 400 aa19.35■□□□□ 0.69
CACNB1-201ENST00000344140 ACOD1A6NK06 481 aa19.35■□□□□ 0.69
CACNB1-201ENST00000344140 UBCP0CG48 685 aaKnown RBP19.35■□□□□ 0.69
CACNB1-201ENST00000344140 SCRN3Q0VDG4 424 aa19.35■□□□□ 0.69
CACNB1-201ENST00000344140 ODF4Q2M2E3 257 aa19.35■□□□□ 0.69
CACNB1-201ENST00000344140 KRTCAP3Q53RY4 240 aa19.35■□□□□ 0.69
CACNB1-201ENST00000344140 ELFN2Q5R3F8 820 aa19.35■□□□□ 0.69
CACNB1-201ENST00000344140 FAM180AQ6UWF9 173 aa19.35■□□□□ 0.69
CACNB1-201ENST00000344140 ZNF813Q6ZN06 617 aa19.35■□□□□ 0.69
CACNB1-201ENST00000344140 RDH10Q8IZV5 341 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms