RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 TPRA1Q86W33 373 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 APCDD1LQ8NCL9 501 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 C2CD4AQ8NCU7 369 aaPredicted RBP6.52□□□□□ -1.37
ZNF540-202ENST00000343599 ACOT12Q8WYK0 555 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 RFKQ969G6 155 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 CTHRC1Q96CG8 243 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 PHYHIPLQ96FC7 376 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 NAA11Q9BSU3 229 aaPredicted RBP6.52□□□□□ -1.37
ZNF540-202ENST00000343599 THUMPD3Q9BV44 507 aaKnown RBP6.52□□□□□ -1.37
ZNF540-202ENST00000343599 GAL3ST2Q9H3Q3 398 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 SLC25A37Q9NYZ2 338 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 SPACA6W5XKT8 324 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 EYSQ5T1H1 3165 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 BPTFQ12830 3046 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 GNG14A0A1W2PPG7 69 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 A0A1W2PQD3 144 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 A8MWP6 167 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 FMO6PO60774 539 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 SS18L1O75177 396 aaPredicted RBP6.51□□□□□ -1.37
ZNF540-202ENST00000343599 AK1P00568 194 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 CD2P06729 351 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 MGMTP16455 207 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 ELK1P19419 428 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 HTR2AP28223 471 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 AKT1P31749 480 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 OMPP47874 163 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 MEOX1P50221 254 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 SUMO1P63165 101 aaKnown RBP6.51□□□□□ -1.37
ZNF540-202ENST00000343599 OLIG2Q13516 323 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 NDUFAF6Q330K2 333 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 VN1R4Q7Z5H5 301 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 CDC20BQ86Y33 519 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 C1QL4Q86Z23 238 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 CA13Q8N1Q1 262 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 FADS6Q8N9I5 356 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 OR4E2Q8NGC2 313 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 HUS1BQ8NHY5 278 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 TSPAN17Q96FV3 270 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 NOL4LQ96MY1 436 aaPredicted RBP6.51□□□□□ -1.37
ZNF540-202ENST00000343599 OR4K3Q96R72 315 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 POLR2J2Q9GZM3 115 aaKnown RBP6.51□□□□□ -1.37
ZNF540-202ENST00000343599 TUBA4BQ9H853 241 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 ZNF160Q9HCG1 818 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 CA10Q9NS85 328 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 CLN6Q9NWW5 311 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 CLEC2DQ9UHP7 191 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 FAM215AQ9Y5M1 114 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 EPG5Q9HCE0 2579 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 ARPC5O15511 151 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 BNIP3LO60238 219 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 CTSVO60911 334 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 RDH16O75452 317 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 ZNF25P17030 456 aaPredicted RBP6.51□□□□□ -1.37
ZNF540-202ENST00000343599 CERS1P27544 350 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 TAGLN2P37802 199 aaKnown RBP6.51□□□□□ -1.37
ZNF540-202ENST00000343599 CHRNA4P43681 627 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 IDH2P48735 452 aaKnown RBP6.51□□□□□ -1.37
ZNF540-202ENST00000343599 ART1P52961 327 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 PRR5P85299 388 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 MELKQ14680 651 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 SURF2Q15527 256 aaPredicted RBP6.51□□□□□ -1.37
ZNF540-202ENST00000343599 EMC4Q5J8M3 183 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 ATP1A1-AS1Q5TC04 95 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 RTL6Q6ICC9 239 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 RFLNAQ6ZTI6 216 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 OR5M3Q8NGP4 307 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 OR51Q1Q8NH59 317 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 AIF1LQ9BQI0 150 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 PIGQQ9BRB3 760 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 TMEM208Q9BTX3 173 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 CHIAQ9BZP6 476 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 C20orf85Q9H1P6 137 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 ACSS1Q9NUB1 689 aaPredicted RBP6.51□□□□□ -1.37
ZNF540-202ENST00000343599 ASF1AQ9Y294 204 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 SLC9A8Q9Y2E8 581 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 MMP24Q9Y5R2 645 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 A0A0A6YYC8 382 aaPredicted RBP6.51□□□□□ -1.37
ZNF540-202ENST00000343599 IGKV1-8A0A0C4DH67 115 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 OR52A4PA6NMU1 304 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 I3L1I5 382 aaPredicted RBP6.51□□□□□ -1.37
ZNF540-202ENST00000343599 SCAMP2O15127 329 aaKnown RBP6.51□□□□□ -1.37
ZNF540-202ENST00000343599 OR2T1O43869 369 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 ZG16O60844 167 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 SLC25A12O75746 678 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 GKN3PP0CG01 181 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 FAM157CP0CG43 387 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 C1GALT1C1LP0DN25 315 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 ZNF35P13682 527 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 S1PR1P21453 382 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 PTPN6P29350 595 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 SRD5A2P31213 254 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 PITPNBP48739 271 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 PNLIPRP2P54317 469 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 HGFACQ04756 655 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 CTBP1Q13363 440 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 C1DQ13901 141 aaKnown RBP6.51□□□□□ -1.37
ZNF540-202ENST00000343599 GAMTQ14353 236 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 USF2Q15853 346 aaPredicted RBP6.51□□□□□ -1.37
ZNF540-202ENST00000343599 BEX5Q5H9J7 111 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 TMEM244Q5VVB8 128 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms