RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 JAM3Q9BX67 310 aa11.37□□□□□ -0.59
SSX2IP-201ENST00000342203 PRRG4Q9BZD6 226 aa11.37□□□□□ -0.59
SSX2IP-201ENST00000342203 HLA-DQB1P01920 261 aa11.37□□□□□ -0.59
SSX2IP-201ENST00000342203 G0S2P27469 103 aa11.37□□□□□ -0.59
SSX2IP-201ENST00000342203 RPS18P62269 152 aaKnown RBP11.37□□□□□ -0.59
SSX2IP-201ENST00000342203 SLC25A30Q5SVS4 291 aa11.37□□□□□ -0.59
SSX2IP-201ENST00000342203 CD200R1LQ6Q8B3 271 aa11.37□□□□□ -0.59
SSX2IP-201ENST00000342203 ARIH2OSQ8N7S6 290 aa11.37□□□□□ -0.59
SSX2IP-201ENST00000342203 RXFP4Q8TDU9 374 aa11.37□□□□□ -0.59
SSX2IP-201ENST00000342203 CCDC74AQ96AQ1 378 aa11.37□□□□□ -0.59
SSX2IP-201ENST00000342203 SGCZQ96LD1 299 aa11.37□□□□□ -0.59
SSX2IP-201ENST00000342203 NMNAT2Q9BZQ4 307 aa11.37□□□□□ -0.59
SSX2IP-201ENST00000342203 KCNS2Q9ULS6 477 aa11.37□□□□□ -0.59
SSX2IP-201ENST00000342203 SLC17A2O00624 439 aa11.37□□□□□ -0.59
SSX2IP-201ENST00000342203 IKZF1Q13422 519 aa11.37□□□□□ -0.59
SSX2IP-201ENST00000342203 RUNX3Q13761 415 aa11.37□□□□□ -0.59
SSX2IP-201ENST00000342203 MCATQ8IVS2 390 aaKnown RBP11.37□□□□□ -0.59
SSX2IP-201ENST00000342203 LILRB2Q8N423 598 aa11.37□□□□□ -0.59
SSX2IP-201ENST00000342203 DAZLQ92904 295 aaKnown RBP11.37□□□□□ -0.59
SSX2IP-201ENST00000342203 FGF22Q9HCT0 170 aa11.37□□□□□ -0.59
SSX2IP-201ENST00000342203 PRSS38A1L453 326 aa11.37□□□□□ -0.59
SSX2IP-201ENST00000342203 ZFP92A6NM28 416 aa11.37□□□□□ -0.59
SSX2IP-201ENST00000342203 ZNF724A8MTY0 619 aa11.37□□□□□ -0.59
SSX2IP-201ENST00000342203 ZNF136P52737 540 aa11.37□□□□□ -0.59
SSX2IP-201ENST00000342203 F2RL1P55085 397 aa11.37□□□□□ -0.59
SSX2IP-201ENST00000342203 Q6ZNB5 142 aa11.37□□□□□ -0.59
SSX2IP-201ENST00000342203 ZNF709Q8N972 641 aa11.37□□□□□ -0.59
SSX2IP-201ENST00000342203 AKR7LQ8NHP1 331 aa11.37□□□□□ -0.59
SSX2IP-201ENST00000342203 ZNF775Q96BV0 537 aaPredicted RBP11.37□□□□□ -0.59
SSX2IP-201ENST00000342203 CLCC1Q96S66 551 aa11.37□□□□□ -0.59
SSX2IP-201ENST00000342203 OR10A5Q9H207 317 aa11.37□□□□□ -0.59
SSX2IP-201ENST00000342203 CENPVL1A0A0U1RR11 272 aa11.36□□□□□ -0.59
SSX2IP-201ENST00000342203 ALOX12BO75342 701 aa11.36□□□□□ -0.59
SSX2IP-201ENST00000342203 GP1BAP07359 652 aa11.36□□□□□ -0.59
SSX2IP-201ENST00000342203 CD96P40200 585 aa11.36□□□□□ -0.59
SSX2IP-201ENST00000342203 FAM26DQ5JW98 314 aa11.36□□□□□ -0.59
SSX2IP-201ENST00000342203 ZNF547Q8IVP9 402 aa11.36□□□□□ -0.59
SSX2IP-201ENST00000342203 TMEM123Q8N131 208 aa11.36□□□□□ -0.59
SSX2IP-201ENST00000342203 BATF2Q8N1L9 274 aa11.36□□□□□ -0.59
SSX2IP-201ENST00000342203 LINC01555Q8NAE3 123 aa11.36□□□□□ -0.59
SSX2IP-201ENST00000342203 ZNF251Q9BRH9 671 aa11.36□□□□□ -0.59
SSX2IP-201ENST00000342203 TIMM29Q9BSF4 260 aa11.36□□□□□ -0.59
SSX2IP-201ENST00000342203 PRAMEF27A3QJZ7 478 aa11.36□□□□□ -0.59
SSX2IP-201ENST00000342203 SEMA7AO75326 666 aa11.36□□□□□ -0.59
SSX2IP-201ENST00000342203 ZNF43P17038 809 aa11.36□□□□□ -0.59
SSX2IP-201ENST00000342203 ASCL1P50553 236 aa11.36□□□□□ -0.59
SSX2IP-201ENST00000342203 RAB11AP62491 216 aa11.36□□□□□ -0.59
SSX2IP-201ENST00000342203 ZNF239Q16600 458 aaKnown RBP11.36□□□□□ -0.59
SSX2IP-201ENST00000342203 KCNG3Q8TAE7 436 aa11.36□□□□□ -0.59
SSX2IP-201ENST00000342203 MRPS24Q96EL2 167 aaKnown RBP11.36□□□□□ -0.59
SSX2IP-201ENST00000342203 TIMM8BQ9Y5J9 83 aaPredicted RBP11.36□□□□□ -0.59
SSX2IP-201ENST00000342203 AHDC1Q5TGY3 1603 aaPredicted RBP11.36□□□□□ -0.59
SSX2IP-201ENST00000342203 TRAV8-7A0A075B6U6 113 aa11.36□□□□□ -0.59
SSX2IP-201ENST00000342203 A0A1W2PPH5 198 aa11.36□□□□□ -0.59
SSX2IP-201ENST00000342203 NPIPB8E9PQR5 432 aa11.36□□□□□ -0.59
SSX2IP-201ENST00000342203 AKR7A3O95154 331 aa11.36□□□□□ -0.59
SSX2IP-201ENST00000342203 RPL23AP62750 156 aaKnown RBP11.36□□□□□ -0.59
SSX2IP-201ENST00000342203 RCBTB1Q8NDN9 531 aa11.36□□□□□ -0.59
SSX2IP-201ENST00000342203 OR56B1Q8NGI3 324 aa11.36□□□□□ -0.59
SSX2IP-201ENST00000342203 PDE7BQ9NP56 450 aa11.36□□□□□ -0.59
SSX2IP-201ENST00000342203 TBC1D29Q9UFV1 150 aa11.36□□□□□ -0.59
SSX2IP-201ENST00000342203 EFNB2P52799 333 aa11.36□□□□□ -0.59
SSX2IP-201ENST00000342203 ZP1P60852 638 aa11.36□□□□□ -0.59
SSX2IP-201ENST00000342203 ACKR1Q16570 336 aa11.36□□□□□ -0.59
SSX2IP-201ENST00000342203 OR2G3Q8NGZ4 309 aa11.36□□□□□ -0.59
SSX2IP-201ENST00000342203 MRPS18AQ9NVS2 196 aaKnown RBP11.36□□□□□ -0.59
SSX2IP-201ENST00000342203 PCDHGA1Q9Y5H4 931 aa11.36□□□□□ -0.59
SSX2IP-201ENST00000342203 SLC22A7Q9Y694 548 aa11.36□□□□□ -0.59
SSX2IP-201ENST00000342203 BHLHE40O14503 412 aa11.36□□□□□ -0.59
SSX2IP-201ENST00000342203 ABCD4O14678 606 aa11.36□□□□□ -0.59
SSX2IP-201ENST00000342203 GSTZ1O43708 216 aaPredicted RBP11.36□□□□□ -0.59
SSX2IP-201ENST00000342203 H2BFSP57053 126 aa11.36□□□□□ -0.59
SSX2IP-201ENST00000342203 DUSP2Q05923 314 aa11.36□□□□□ -0.59
SSX2IP-201ENST00000342203 WDR38Q5JTN6 314 aa11.36□□□□□ -0.59
SSX2IP-201ENST00000342203 RPUSD3Q6P087 351 aaKnown RBP11.36□□□□□ -0.59
SSX2IP-201ENST00000342203 ANKRD16Q6P6B7 361 aa11.36□□□□□ -0.59
SSX2IP-201ENST00000342203 OR5M8Q8NGP6 311 aa11.36□□□□□ -0.59
SSX2IP-201ENST00000342203 MITD1Q8WV92 249 aa11.36□□□□□ -0.59
SSX2IP-201ENST00000342203 SCN2AQ99250 2005 aa11.35□□□□□ -0.59
SSX2IP-201ENST00000342203 JTBO76095 146 aa11.35□□□□□ -0.59
SSX2IP-201ENST00000342203 ABCD3P28288 659 aa11.35□□□□□ -0.59
SSX2IP-201ENST00000342203 MIDNQ504T8 468 aa11.35□□□□□ -0.59
SSX2IP-201ENST00000342203 ZNF705AQ6ZN79 300 aaPredicted RBP11.35□□□□□ -0.59
SSX2IP-201ENST00000342203 PRR18Q8N4B5 295 aa11.35□□□□□ -0.59
SSX2IP-201ENST00000342203 OR1S1Q8NH92 325 aa11.35□□□□□ -0.59
SSX2IP-201ENST00000342203 CA5BP1Q8WTZ4 195 aa11.35□□□□□ -0.59
SSX2IP-201ENST00000342203 PIGTQ969N2 578 aa11.35□□□□□ -0.59
SSX2IP-201ENST00000342203 RASL12Q9NYN1 266 aa11.35□□□□□ -0.59
SSX2IP-201ENST00000342203 GHRLQ9UBU3 117 aa11.35□□□□□ -0.59
SSX2IP-201ENST00000342203 NXT1Q9UKK6 140 aaKnown RBP11.35□□□□□ -0.59
SSX2IP-201ENST00000342203 LILRB5O75023 590 aa11.35□□□□□ -0.59
SSX2IP-201ENST00000342203 WNT11O96014 354 aa11.35□□□□□ -0.59
SSX2IP-201ENST00000342203 IFNA1P01562 189 aa11.35□□□□□ -0.59
SSX2IP-201ENST00000342203 CST5P28325 142 aaPredicted RBP11.35□□□□□ -0.59
SSX2IP-201ENST00000342203 NPBWR1P48145 328 aa11.35□□□□□ -0.59
SSX2IP-201ENST00000342203 TAS2R46P59540 309 aa11.35□□□□□ -0.59
SSX2IP-201ENST00000342203 RPL7L1Q6DKI1 246 aaKnown RBP11.35□□□□□ -0.59
SSX2IP-201ENST00000342203 CCL4L1Q8NHW4 92 aa11.35□□□□□ -0.59
SSX2IP-201ENST00000342203 PLEK2Q9NYT0 353 aa11.35□□□□□ -0.59
SSX2IP-201ENST00000342203 LCATP04180 440 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms