RNA–Protein interactions for RNA: ENST00000338784.8

TNFSF13-201, Transcript of TNF superfamily member 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,971 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-201ENST00000338784 IGKV1D-43A0A0B4J1Z2 117 aa13.46□□□□□ -0.25
TNFSF13-201ENST00000338784 A0A1W2PPL8 197 aa13.46□□□□□ -0.25
TNFSF13-201ENST00000338784 TUBAL3A6NHL2 446 aa13.46□□□□□ -0.25
TNFSF13-201ENST00000338784 A6NJ64 397 aa13.46□□□□□ -0.25
TNFSF13-201ENST00000338784 VSTM2BA6NLU5 285 aa13.46□□□□□ -0.25
TNFSF13-201ENST00000338784 F5H5P2 479 aa13.46□□□□□ -0.25
TNFSF13-201ENST00000338784 GOSR2O14653 212 aa13.46□□□□□ -0.25
TNFSF13-201ENST00000338784 TOX3O15405 576 aaPredicted RBP13.46□□□□□ -0.25
TNFSF13-201ENST00000338784 RGS11O94810 467 aa13.46□□□□□ -0.25
TNFSF13-201ENST00000338784 SIX6O95475 246 aa13.46□□□□□ -0.25
TNFSF13-201ENST00000338784 RAB3DO95716 219 aa13.46□□□□□ -0.25
TNFSF13-201ENST00000338784 HRGP04196 525 aa13.46□□□□□ -0.25
TNFSF13-201ENST00000338784 MELTFP08582 738 aa13.46□□□□□ -0.25
TNFSF13-201ENST00000338784 H2BFMP0C1H6 154 aa13.46□□□□□ -0.25
TNFSF13-201ENST00000338784 UBCP0CG48 685 aaKnown RBP13.46□□□□□ -0.25
TNFSF13-201ENST00000338784 SEC61A1P61619 476 aaKnown RBP13.46□□□□□ -0.25
TNFSF13-201ENST00000338784 FOXF1Q12946 379 aa13.46□□□□□ -0.25
TNFSF13-201ENST00000338784 C2orf68Q2NKX9 166 aa13.46□□□□□ -0.25
TNFSF13-201ENST00000338784 FAM209AQ5JX71 171 aa13.46□□□□□ -0.25
TNFSF13-201ENST00000338784 TMEM205Q6UW68 189 aa13.46□□□□□ -0.25
TNFSF13-201ENST00000338784 C3P1Q6ZMU1 363 aa13.46□□□□□ -0.25
TNFSF13-201ENST00000338784 WDFY1Q8IWB7 410 aa13.46□□□□□ -0.25
TNFSF13-201ENST00000338784 CDH26Q8IXH8 852 aa13.46□□□□□ -0.25
TNFSF13-201ENST00000338784 NKAIN3Q8N8D7 197 aa13.46□□□□□ -0.25
TNFSF13-201ENST00000338784 FOXRED1Q96CU9 486 aaPredicted RBP13.46□□□□□ -0.25
TNFSF13-201ENST00000338784 GAL3ST1Q99999 423 aa13.46□□□□□ -0.25
TNFSF13-201ENST00000338784 ALX4Q9H161 411 aaPredicted RBP13.46□□□□□ -0.25
TNFSF13-201ENST00000338784 DUSP15Q9H1R2 295 aaPredicted RBP13.46□□□□□ -0.25
TNFSF13-201ENST00000338784 SLCO5A1Q9H2Y9 848 aa13.46□□□□□ -0.25
TNFSF13-201ENST00000338784 TMEM138Q9NPI0 162 aa13.46□□□□□ -0.25
TNFSF13-201ENST00000338784 CENPMQ9NSP4 180 aa13.46□□□□□ -0.25
TNFSF13-201ENST00000338784 LOC390937A0A1W2PQ73 354 aa13.45□□□□□ -0.26
TNFSF13-201ENST00000338784 OR6C65A6NJZ3 312 aa13.45□□□□□ -0.26
TNFSF13-201ENST00000338784 HMSDA8MTL9 139 aa13.45□□□□□ -0.26
TNFSF13-201ENST00000338784 I3L521 148 aa13.45□□□□□ -0.26
TNFSF13-201ENST00000338784 LDLRAD4O15165 306 aa13.45□□□□□ -0.26
TNFSF13-201ENST00000338784 ALOX12BO75342 701 aa13.45□□□□□ -0.26
TNFSF13-201ENST00000338784 ITGB2P05107 769 aa13.45□□□□□ -0.26
TNFSF13-201ENST00000338784 RRASP10301 218 aa13.45□□□□□ -0.26
TNFSF13-201ENST00000338784 ZNF35P13682 527 aa13.45□□□□□ -0.26
TNFSF13-201ENST00000338784 MMP16P51512 607 aa13.45□□□□□ -0.26
TNFSF13-201ENST00000338784 UBE2MP61081 183 aaKnown RBP13.45□□□□□ -0.26
TNFSF13-201ENST00000338784 OC90Q02509 493 aaPredicted RBP13.45□□□□□ -0.26
TNFSF13-201ENST00000338784 SQSTM1Q13501 440 aa13.45□□□□□ -0.26
TNFSF13-201ENST00000338784 NKAIN1Q4KMZ8 207 aa13.45□□□□□ -0.26
TNFSF13-201ENST00000338784 NHLRC3Q5JS37 347 aa13.45□□□□□ -0.26
TNFSF13-201ENST00000338784 C1orf100Q5SVJ3 147 aa13.45□□□□□ -0.26
TNFSF13-201ENST00000338784 TMEM71Q6P5X7 295 aa13.45□□□□□ -0.26
TNFSF13-201ENST00000338784 CORO6Q6QEF8 472 aa13.45□□□□□ -0.26
TNFSF13-201ENST00000338784 RFPL4BQ6ZWI9 263 aa13.45□□□□□ -0.26
TNFSF13-201ENST00000338784 SLC38A9Q8NBW4 561 aa13.45□□□□□ -0.26
TNFSF13-201ENST00000338784 SUN5Q8TC36 379 aa13.45□□□□□ -0.26
TNFSF13-201ENST00000338784 RNF133Q8WVZ7 376 aa13.45□□□□□ -0.26
TNFSF13-201ENST00000338784 PTX4Q96A99 478 aa13.45□□□□□ -0.26
TNFSF13-201ENST00000338784 B3GALT5Q9Y2C3 310 aa13.45□□□□□ -0.26
TNFSF13-201ENST00000338784 TRBV11-1A0A0K0K1C0 115 aa13.45□□□□□ -0.26
TNFSF13-201ENST00000338784 TMEM238LA0A1B0GVL6 79 aa13.45□□□□□ -0.26
TNFSF13-201ENST00000338784 LIPT2A6NK58 231 aa13.45□□□□□ -0.26
TNFSF13-201ENST00000338784 H3BML4 177 aa13.45□□□□□ -0.26
TNFSF13-201ENST00000338784 P2RY10O00398 339 aa13.45□□□□□ -0.26
TNFSF13-201ENST00000338784 CAPZA1P52907 286 aa13.45□□□□□ -0.26
TNFSF13-201ENST00000338784 ACY1Q03154 408 aa13.45□□□□□ -0.26
TNFSF13-201ENST00000338784 PMPCAQ10713 525 aa13.45□□□□□ -0.26
TNFSF13-201ENST00000338784 MPPED2Q15777 294 aa13.45□□□□□ -0.26
TNFSF13-201ENST00000338784 WDR45BQ5MNZ6 344 aa13.45□□□□□ -0.26
TNFSF13-201ENST00000338784 IDO2Q6ZQW0 420 aa13.45□□□□□ -0.26
TNFSF13-201ENST00000338784 OR10H5Q8NGA6 315 aa13.45□□□□□ -0.26
TNFSF13-201ENST00000338784 CCDC107Q8WV48 283 aa13.45□□□□□ -0.26
TNFSF13-201ENST00000338784 SLC25A21Q9BQT8 299 aaPredicted RBP13.45□□□□□ -0.26
TNFSF13-201ENST00000338784 CHST6Q9GZX3 395 aa13.45□□□□□ -0.26
TNFSF13-201ENST00000338784 POFUT1Q9H488 388 aa13.45□□□□□ -0.26
TNFSF13-201ENST00000338784 ALKBH4Q9NXW9 302 aa13.45□□□□□ -0.26
TNFSF13-201ENST00000338784 KLRF1Q9NZS2 232 aa13.45□□□□□ -0.26
TNFSF13-201ENST00000338784 KIF25Q9UIL4 384 aa13.45□□□□□ -0.26
TNFSF13-201ENST00000338784 LAMA1P25391 3075 aa13.45□□□□□ -0.26
TNFSF13-201ENST00000338784 CPAMD8Q8IZJ3 1885 aa13.44□□□□□ -0.26
TNFSF13-201ENST00000338784 ARPC5O15511 151 aa13.44□□□□□ -0.26
TNFSF13-201ENST00000338784 LMX1BO60663 402 aa13.44□□□□□ -0.26
TNFSF13-201ENST00000338784 PMS2P2O95744 297 aa13.44□□□□□ -0.26
TNFSF13-201ENST00000338784 CYB5AP00167 134 aa13.44□□□□□ -0.26
TNFSF13-201ENST00000338784 NAGAP17050 411 aa13.44□□□□□ -0.26
TNFSF13-201ENST00000338784 S100A11P31949 105 aa13.44□□□□□ -0.26
TNFSF13-201ENST00000338784 SIGIRRQ6IA17 410 aa13.44□□□□□ -0.26
TNFSF13-201ENST00000338784 C11orf88Q6PI97 169 aa13.44□□□□□ -0.26
TNFSF13-201ENST00000338784 PAPD4Q6PIY7 484 aaKnown RBP13.44□□□□□ -0.26
TNFSF13-201ENST00000338784 TSSK4Q6SA08 328 aa13.44□□□□□ -0.26
TNFSF13-201ENST00000338784 TMPRSS9Q7Z410 1059 aa13.44□□□□□ -0.26
TNFSF13-201ENST00000338784 SPEM1Q8N4L4 309 aa13.44□□□□□ -0.26
TNFSF13-201ENST00000338784 ASB13Q8WXK3 278 aa13.44□□□□□ -0.26
TNFSF13-201ENST00000338784 C1orf198Q9H425 327 aa13.44□□□□□ -0.26
TNFSF13-201ENST00000338784 FANCFQ9NPI8 374 aa13.44□□□□□ -0.26
TNFSF13-201ENST00000338784 MYEF2Q9P2K5 600 aaKnown RBP13.44□□□□□ -0.26
TNFSF13-201ENST00000338784 ZNF107Q9UII5 783 aaPredicted RBP13.44□□□□□ -0.26
TNFSF13-201ENST00000338784 ATXN7L1Q9ULK2 861 aaPredicted RBP13.44□□□□□ -0.26
TNFSF13-201ENST00000338784 SPAG17Q6Q759 2223 aa13.44□□□□□ -0.26
TNFSF13-201ENST00000338784 CACNA1CQ13936 2221 aa13.44□□□□□ -0.26
TNFSF13-201ENST00000338784 LOC101059948A0A1B0GTJ6 334 aa13.43□□□□□ -0.26
TNFSF13-201ENST00000338784 TMEM200CA6NKL6 621 aa13.43□□□□□ -0.26
TNFSF13-201ENST00000338784 SHISA8B8ZZ34 492 aa13.43□□□□□ -0.26
TNFSF13-201ENST00000338784 ETV2O00321 342 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms