RNA–Protein interactions for RNA: ENST00000338045.7

LIMS1-202, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-202ENST00000338045 TAF4O00268 1085 aa13.63□□□□□ -0.23
LIMS1-202ENST00000338045 NCR1O76036 304 aa13.63□□□□□ -0.23
LIMS1-202ENST00000338045 EIF2S3P41091 472 aaKnown RBP13.63□□□□□ -0.23
LIMS1-202ENST00000338045 HIST1H3AP68431 136 aa13.63□□□□□ -0.23
LIMS1-202ENST00000338045 SGCAQ16586 387 aa13.63□□□□□ -0.23
LIMS1-202ENST00000338045 HSD17B12Q53GQ0 312 aa13.63□□□□□ -0.23
LIMS1-202ENST00000338045 HIST2H3PS2Q5TEC6 136 aa13.63□□□□□ -0.23
LIMS1-202ENST00000338045 FAM27BQ5VT28 67 aa13.63□□□□□ -0.23
LIMS1-202ENST00000338045 PLXDC2Q6UX71 529 aa13.63□□□□□ -0.23
LIMS1-202ENST00000338045 HIST2H3AQ71DI3 136 aa13.63□□□□□ -0.23
LIMS1-202ENST00000338045 LINGO2Q7L985 606 aa13.63□□□□□ -0.23
LIMS1-202ENST00000338045 CHMP1BQ7LBR1 199 aa13.63□□□□□ -0.23
LIMS1-202ENST00000338045 CCDC190Q86UF4 302 aa13.63□□□□□ -0.23
LIMS1-202ENST00000338045 CROCCP3Q8IVE0 287 aa13.63□□□□□ -0.23
LIMS1-202ENST00000338045 GPR137CQ8N3F9 429 aa13.63□□□□□ -0.23
LIMS1-202ENST00000338045 GPR148Q8TDV2 347 aa13.63□□□□□ -0.23
LIMS1-202ENST00000338045 CRLF2Q9HC73 371 aa13.63□□□□□ -0.23
LIMS1-202ENST00000338045 NOX4Q9NPH5 578 aa13.63□□□□□ -0.23
LIMS1-202ENST00000338045 B3GAT2Q9NPZ5 323 aa13.63□□□□□ -0.23
LIMS1-202ENST00000338045 G6PC2Q9NQR9 355 aa13.63□□□□□ -0.23
LIMS1-202ENST00000338045 PARPBPQ9NWS1 579 aa13.63□□□□□ -0.23
LIMS1-202ENST00000338045 SLC22A13Q9Y226 551 aa13.63□□□□□ -0.23
LIMS1-202ENST00000338045 APC2O95996 2303 aa13.63□□□□□ -0.23
LIMS1-202ENST00000338045 A0A1W2PPK0 400 aa13.63□□□□□ -0.23
LIMS1-202ENST00000338045 ACOD1A6NK06 481 aa13.63□□□□□ -0.23
LIMS1-202ENST00000338045 AQP7O14520 342 aa13.63□□□□□ -0.23
LIMS1-202ENST00000338045 RER1O15258 196 aa13.63□□□□□ -0.23
LIMS1-202ENST00000338045 MRPL33O75394 65 aaKnown RBP13.63□□□□□ -0.23
LIMS1-202ENST00000338045 PDGFAP04085 211 aa13.63□□□□□ -0.23
LIMS1-202ENST00000338045 NPR2P20594 1047 aa13.63□□□□□ -0.23
LIMS1-202ENST00000338045 MAPK3P27361 379 aaPredicted RBP13.63□□□□□ -0.23
LIMS1-202ENST00000338045 BTLAQ7Z6A9 289 aa13.63□□□□□ -0.23
LIMS1-202ENST00000338045 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.63□□□□□ -0.23
LIMS1-202ENST00000338045 SIAH3Q8IW03 269 aa13.63□□□□□ -0.23
LIMS1-202ENST00000338045 TUSC5Q8IXB3 177 aa13.63□□□□□ -0.23
LIMS1-202ENST00000338045 THRSPQ92748 146 aa13.63□□□□□ -0.23
LIMS1-202ENST00000338045 ALKBH3Q96Q83 286 aaPredicted RBP13.63□□□□□ -0.23
LIMS1-202ENST00000338045 ATF6BQ99941 703 aa13.63□□□□□ -0.23
LIMS1-202ENST00000338045 PRRG4Q9BZD6 226 aa13.63□□□□□ -0.23
LIMS1-202ENST00000338045 ZCCHC4Q9H5U6 513 aa13.63□□□□□ -0.23
LIMS1-202ENST00000338045 NIPAL2Q9H841 368 aa13.63□□□□□ -0.23
LIMS1-202ENST00000338045 DDX28Q9NUL7 540 aaKnown RBP13.63□□□□□ -0.23
LIMS1-202ENST00000338045 TMEM38BQ9NVV0 291 aa13.63□□□□□ -0.23
LIMS1-202ENST00000338045 FAM206AQ9NX38 181 aa13.63□□□□□ -0.23
LIMS1-202ENST00000338045 EMC9Q9Y3B6 208 aa13.63□□□□□ -0.23
LIMS1-202ENST00000338045 ZNF175Q9Y473 711 aa13.63□□□□□ -0.23
LIMS1-202ENST00000338045 TRBV5-7A0A0A0MS05 114 aa13.62□□□□□ -0.23
LIMS1-202ENST00000338045 TMEM269A0A1B0GVZ9 245 aa13.62□□□□□ -0.23
LIMS1-202ENST00000338045 LOC110117498-PIK3R3F6TDL0 507 aa13.62□□□□□ -0.23
LIMS1-202ENST00000338045 RAF1P04049 648 aa13.62□□□□□ -0.23
LIMS1-202ENST00000338045 ISG15P05161 165 aa13.62□□□□□ -0.23
LIMS1-202ENST00000338045 YES1P07947 543 aa13.62□□□□□ -0.23
LIMS1-202ENST00000338045 OCM2P0CE71 109 aa13.62□□□□□ -0.23
LIMS1-202ENST00000338045 TNFSF8P32971 234 aa13.62□□□□□ -0.23
LIMS1-202ENST00000338045 MAGEB1P43366 347 aa13.62□□□□□ -0.23
LIMS1-202ENST00000338045 ZNF45Q02386 682 aa13.62□□□□□ -0.23
LIMS1-202ENST00000338045 STK11Q15831 433 aa13.62□□□□□ -0.23
LIMS1-202ENST00000338045 CEP78Q5JTW2 689 aa13.62□□□□□ -0.23
LIMS1-202ENST00000338045 ADGRE4PQ86SQ3 457 aa13.62□□□□□ -0.23
LIMS1-202ENST00000338045 RDH10Q8IZV5 341 aa13.62□□□□□ -0.23
LIMS1-202ENST00000338045 OR10AC1Q8NH08 325 aa13.62□□□□□ -0.23
LIMS1-202ENST00000338045 PPP1R14AQ96A00 147 aa13.62□□□□□ -0.23
LIMS1-202ENST00000338045 TAAR6Q96RI8 345 aa13.62□□□□□ -0.23
LIMS1-202ENST00000338045 SLCO5A1Q9H2Y9 848 aa13.62□□□□□ -0.23
LIMS1-202ENST00000338045 GPR35Q9HC97 309 aa13.62□□□□□ -0.23
LIMS1-202ENST00000338045 GP6Q9HCN6 339 aa13.62□□□□□ -0.23
LIMS1-202ENST00000338045 OR52A1Q9UKL2 312 aa13.62□□□□□ -0.23
LIMS1-202ENST00000338045 CAMK2AQ9UQM7 478 aa13.62□□□□□ -0.23
LIMS1-202ENST00000338045 OR6C65A6NJZ3 312 aa13.61□□□□□ -0.23
LIMS1-202ENST00000338045 SRMP19623 302 aa13.61□□□□□ -0.23
LIMS1-202ENST00000338045 RAB3BP20337 219 aa13.61□□□□□ -0.23
LIMS1-202ENST00000338045 CTSSP25774 331 aa13.61□□□□□ -0.23
LIMS1-202ENST00000338045 CD40LGP29965 261 aa13.61□□□□□ -0.23
LIMS1-202ENST00000338045 PPP5CP53041 499 aa13.61□□□□□ -0.23
LIMS1-202ENST00000338045 OR10A3P58181 314 aa13.61□□□□□ -0.23
LIMS1-202ENST00000338045 PSMA6P60900 246 aaKnown RBP13.61□□□□□ -0.23
LIMS1-202ENST00000338045 TSPO2Q5TGU0 170 aa13.61□□□□□ -0.23
LIMS1-202ENST00000338045 TMEM53Q6P2H8 277 aa13.61□□□□□ -0.23
LIMS1-202ENST00000338045 SFXN4Q6P4A7 337 aa13.61□□□□□ -0.23
LIMS1-202ENST00000338045 KLHL24Q6TFL4 600 aa13.61□□□□□ -0.23
LIMS1-202ENST00000338045 GJC3Q8NFK1 279 aa13.61□□□□□ -0.23
LIMS1-202ENST00000338045 OR51A4Q8NGJ6 313 aa13.61□□□□□ -0.23
LIMS1-202ENST00000338045 KCTD12Q96CX2 325 aaKnown RBP13.61□□□□□ -0.23
LIMS1-202ENST00000338045 MIXL1Q9H2W2 232 aa13.61□□□□□ -0.23
LIMS1-202ENST00000338045 CMAHPQ9Y471 501 aa13.61□□□□□ -0.23
LIMS1-202ENST00000338045 NCOA6Q14686 2063 aaPredicted RBP13.61□□□□□ -0.23
LIMS1-202ENST00000338045 K7ENP7 123 aa13.61□□□□□ -0.23
LIMS1-202ENST00000338045 RGS5O15539 181 aa13.61□□□□□ -0.23
LIMS1-202ENST00000338045 PFDN1O60925 122 aa13.61□□□□□ -0.23
LIMS1-202ENST00000338045 WISP2O76076 250 aa13.61□□□□□ -0.23
LIMS1-202ENST00000338045 SLC34A2O95436 690 aa13.61□□□□□ -0.23
LIMS1-202ENST00000338045 THBS2P35442 1172 aa13.61□□□□□ -0.23
LIMS1-202ENST00000338045 CEACAM16Q2WEN9 425 aa13.61□□□□□ -0.23
LIMS1-202ENST00000338045 NRN1LQ496H8 165 aa13.61□□□□□ -0.23
LIMS1-202ENST00000338045 DDI2Q5TDH0 399 aa13.61□□□□□ -0.23
LIMS1-202ENST00000338045 INO80CQ6PI98 192 aaPredicted RBP13.61□□□□□ -0.23
LIMS1-202ENST00000338045 ZNF554Q86TJ5 538 aa13.61□□□□□ -0.23
LIMS1-202ENST00000338045 LAX1Q8IWV1 398 aa13.61□□□□□ -0.23
LIMS1-202ENST00000338045 RBMXL3Q8N7X1 1067 aaKnown RBP13.61□□□□□ -0.23
LIMS1-202ENST00000338045 ACOT12Q8WYK0 555 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms