RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 OR2T2Q6IF00 324 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 VHLLQ6RSH7 139 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 LAMP3Q9UQV4 416 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 RICTORQ6R327 1708 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 ARRDC5A6NEK1 342 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 ARNTP27540 789 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 OR2B8PP59922 312 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 EGR3Q06889 387 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 FABP9Q0Z7S8 132 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 DOC2BQ14184 412 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 ZBTB44Q8NCP5 570 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 FAM71CQ8NEG0 241 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 TEAD3Q99594 435 aa11.98□□□□□ -0.49
HLCS-201ENST00000336648 RFPL4AA6NLU0 287 aa11.97□□□□□ -0.49
HLCS-201ENST00000336648 RFPL4AL1F8VTS6 287 aa11.97□□□□□ -0.49
HLCS-201ENST00000336648 H3BQ06 376 aaPredicted RBP11.97□□□□□ -0.49
HLCS-201ENST00000336648 I6L893 689 aaPredicted RBP11.97□□□□□ -0.49
HLCS-201ENST00000336648 NME2P1O60361 137 aa11.97□□□□□ -0.49
HLCS-201ENST00000336648 MMP11P24347 488 aa11.97□□□□□ -0.49
HLCS-201ENST00000336648 RPS19P39019 145 aaKnown RBP11.97□□□□□ -0.49
HLCS-201ENST00000336648 LBX1P52954 281 aa11.97□□□□□ -0.49
HLCS-201ENST00000336648 LPAL2Q16609 132 aa11.97□□□□□ -0.49
HLCS-201ENST00000336648 IQCJQ1A5X6 159 aa11.97□□□□□ -0.49
HLCS-201ENST00000336648 H1FXQ92522 213 aaKnown RBP11.97□□□□□ -0.49
HLCS-201ENST00000336648 HLA-CQ95604 372 aa11.97□□□□□ -0.49
HLCS-201ENST00000336648 WWTR1Q9GZV5 400 aa11.97□□□□□ -0.49
HLCS-201ENST00000336648 LRP6O75581 1613 aa11.97□□□□□ -0.49
HLCS-201ENST00000336648 MPGP29372 298 aa11.97□□□□□ -0.49
HLCS-201ENST00000336648 NPY4RP50391 375 aa11.97□□□□□ -0.49
HLCS-201ENST00000336648 DHODHQ02127 395 aa11.97□□□□□ -0.49
HLCS-201ENST00000336648 FXNQ16595 210 aa11.97□□□□□ -0.49
HLCS-201ENST00000336648 ACOT7LQ6ZUV0 252 aa11.97□□□□□ -0.49
HLCS-201ENST00000336648 ZNF511Q8NB15 262 aa11.97□□□□□ -0.49
HLCS-201ENST00000336648 TSLPQ969D9 159 aa11.97□□□□□ -0.49
HLCS-201ENST00000336648 MBOAT4Q96T53 435 aa11.97□□□□□ -0.49
HLCS-201ENST00000336648 GABARAPL3Q9BY60 117 aa11.97□□□□□ -0.49
HLCS-201ENST00000336648 DLL4Q9NR61 685 aa11.97□□□□□ -0.49
HLCS-201ENST00000336648 AKAP12Q02952 1782 aa11.97□□□□□ -0.49
HLCS-201ENST00000336648 CPEP16870 476 aa11.97□□□□□ -0.49
HLCS-201ENST00000336648 COX20Q5RI15 118 aa11.97□□□□□ -0.49
HLCS-201ENST00000336648 THEM4Q5T1C6 240 aa11.97□□□□□ -0.49
HLCS-201ENST00000336648 OR4F5Q8NH21 305 aa11.97□□□□□ -0.49
HLCS-201ENST00000336648 PIGTQ969N2 578 aa11.97□□□□□ -0.49
HLCS-201ENST00000336648 OR4F4Q96R69 305 aa11.97□□□□□ -0.49
HLCS-201ENST00000336648 NDFIP1Q9BT67 221 aa11.97□□□□□ -0.49
HLCS-201ENST00000336648 LAT2Q9GZY6 243 aa11.97□□□□□ -0.49
HLCS-201ENST00000336648 TAPBPO15533 448 aa11.97□□□□□ -0.49
HLCS-201ENST00000336648 TIGITQ495A1 244 aa11.97□□□□□ -0.49
HLCS-201ENST00000336648 TRIM61Q5EBN2 209 aa11.97□□□□□ -0.49
HLCS-201ENST00000336648 PRAMEF5Q5TYX0 476 aa11.97□□□□□ -0.49
HLCS-201ENST00000336648 PRAMEF6Q5VXH4 476 aa11.97□□□□□ -0.49
HLCS-201ENST00000336648 AFMIDQ63HM1 303 aa11.97□□□□□ -0.49
HLCS-201ENST00000336648 METRNLQ641Q3 311 aa11.97□□□□□ -0.49
HLCS-201ENST00000336648 COMMD1Q8N668 190 aa11.97□□□□□ -0.49
HLCS-201ENST00000336648 PDXPQ96GD0 296 aa11.97□□□□□ -0.49
HLCS-201ENST00000336648 GNB4Q9HAV0 340 aa11.97□□□□□ -0.49
HLCS-201ENST00000336648 CMC2Q9NRP2 79 aa11.97□□□□□ -0.49
HLCS-201ENST00000336648 SH2D1BO14796 132 aa11.96□□□□□ -0.49
HLCS-201ENST00000336648 RRP8O43159 456 aaKnown RBP11.96□□□□□ -0.49
HLCS-201ENST00000336648 NXPH3O95157 252 aa11.96□□□□□ -0.49
HLCS-201ENST00000336648 SULT1A2P50226 295 aa11.96□□□□□ -0.49
HLCS-201ENST00000336648 MLF2Q15773 248 aaPredicted RBP11.96□□□□□ -0.49
HLCS-201ENST00000336648 SMAD2Q15796 467 aaKnown RBP11.96□□□□□ -0.49
HLCS-201ENST00000336648 ST8SIA1Q92185 356 aa11.96□□□□□ -0.49
HLCS-201ENST00000336648 DBX1A6NMT0 343 aa11.96□□□□□ -0.49
HLCS-201ENST00000336648 ZNF727A8MUV8 499 aa11.96□□□□□ -0.49
HLCS-201ENST00000336648 XRCC2O43543 280 aa11.96□□□□□ -0.49
HLCS-201ENST00000336648 EN2P19622 333 aaPredicted RBP11.96□□□□□ -0.49
HLCS-201ENST00000336648 LIPAP38571 399 aa11.96□□□□□ -0.49
HLCS-201ENST00000336648 CCR6P51684 374 aa11.96□□□□□ -0.49
HLCS-201ENST00000336648 CABLES2Q9BTV7 478 aa11.96□□□□□ -0.49
HLCS-201ENST00000336648 C20orf27Q9GZN8 174 aa11.96□□□□□ -0.49
HLCS-201ENST00000336648 LOC102723971A0A1B0GUV8 181 aa11.96□□□□□ -0.49
HLCS-201ENST00000336648 HSD17B6O14756 317 aa11.96□□□□□ -0.49
HLCS-201ENST00000336648 CNIH1O95406 144 aa11.96□□□□□ -0.49
HLCS-201ENST00000336648 POLR2IP36954 125 aaKnown RBP11.96□□□□□ -0.49
HLCS-201ENST00000336648 EPHA5P54756 1037 aa11.96□□□□□ -0.49
HLCS-201ENST00000336648 MLF1P58340 268 aa11.96□□□□□ -0.49
HLCS-201ENST00000336648 RTL8BQ17RB0 113 aa11.96□□□□□ -0.49
HLCS-201ENST00000336648 LBHQ53QV2 105 aaPredicted RBP11.96□□□□□ -0.49
HLCS-201ENST00000336648 SYT14P1Q58G82 188 aa11.96□□□□□ -0.49
HLCS-201ENST00000336648 SLC38A9Q8NBW4 561 aa11.96□□□□□ -0.49
HLCS-201ENST00000336648 OR51S1Q8NGJ8 323 aa11.96□□□□□ -0.49
HLCS-201ENST00000336648 DUS3LQ96G46 650 aaKnown RBP11.96□□□□□ -0.49
HLCS-201ENST00000336648 ACTR3CQ9C0K3 210 aaPredicted RBP11.96□□□□□ -0.49
HLCS-201ENST00000336648 P2RY12Q9H244 342 aa11.96□□□□□ -0.49
HLCS-201ENST00000336648 CDCP1Q9H5V8 836 aa11.96□□□□□ -0.49
HLCS-201ENST00000336648 DUSP13Q9UII6 198 aa11.96□□□□□ -0.49
HLCS-201ENST00000336648 SLCO1B1Q9Y6L6 691 aa11.96□□□□□ -0.49
HLCS-201ENST00000336648 MYH11P35749 1972 aa11.96□□□□□ -0.49
HLCS-201ENST00000336648 HSPB6O14558 160 aa11.96□□□□□ -0.5
HLCS-201ENST00000336648 SELENBP1Q13228 472 aa11.96□□□□□ -0.5
HLCS-201ENST00000336648 ACOT6Q3I5F7 207 aaPredicted RBP11.96□□□□□ -0.5
HLCS-201ENST00000336648 AGBL4Q5VU57 503 aa11.96□□□□□ -0.5
HLCS-201ENST00000336648 MARCH3Q86UD3 253 aa11.96□□□□□ -0.5
HLCS-201ENST00000336648 RPS19BP1Q86WX3 136 aaKnown RBP11.96□□□□□ -0.5
HLCS-201ENST00000336648 PLPP7Q8NBV4 271 aa11.96□□□□□ -0.5
HLCS-201ENST00000336648 C19orf43Q9BQ61 176 aa11.96□□□□□ -0.5
HLCS-201ENST00000336648 COA3Q9Y2R0 106 aaPredicted RBP11.96□□□□□ -0.5
HLCS-201ENST00000336648 SIT1Q9Y3P8 196 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms