RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 C1orf196B1AJZ1 125 aa14.89□□□□□ -0.03
CDC42EP4-201ENST00000335793 RORAP35398 523 aa14.89□□□□□ -0.03
CDC42EP4-201ENST00000335793 GNALP38405 381 aa14.89□□□□□ -0.03
CDC42EP4-201ENST00000335793 SLC25A1P53007 311 aa14.89□□□□□ -0.03
CDC42EP4-201ENST00000335793 CHAF1BQ13112 559 aa14.89□□□□□ -0.03
CDC42EP4-201ENST00000335793 TAF13Q15543 124 aa14.89□□□□□ -0.03
CDC42EP4-201ENST00000335793 DCAF12L2Q5VW00 463 aa14.89□□□□□ -0.03
CDC42EP4-201ENST00000335793 LIN54Q6MZP7 749 aa14.89□□□□□ -0.03
CDC42EP4-201ENST00000335793 LRRTM1Q86UE6 522 aa14.89□□□□□ -0.03
CDC42EP4-201ENST00000335793 CD163Q86VB7 1156 aa14.89□□□□□ -0.03
CDC42EP4-201ENST00000335793 CDC20BQ86Y33 519 aa14.89□□□□□ -0.03
CDC42EP4-201ENST00000335793 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.89□□□□□ -0.03
CDC42EP4-201ENST00000335793 SLC25A44Q96H78 314 aaPredicted RBP14.89□□□□□ -0.03
CDC42EP4-201ENST00000335793 SEC22AQ96IW7 307 aa14.89□□□□□ -0.03
CDC42EP4-201ENST00000335793 TMEM184BQ9Y519 407 aaPredicted RBP14.89□□□□□ -0.03
CDC42EP4-201ENST00000335793 NPTNQ9Y639 398 aa14.89□□□□□ -0.03
CDC42EP4-201ENST00000335793 CD1AP06126 327 aa14.89□□□□□ -0.03
CDC42EP4-201ENST00000335793 GP1BBP13224 206 aa14.89□□□□□ -0.03
CDC42EP4-201ENST00000335793 PRF1P14222 555 aa14.89□□□□□ -0.03
CDC42EP4-201ENST00000335793 CPN1P15169 458 aa14.89□□□□□ -0.03
CDC42EP4-201ENST00000335793 BLKP51451 505 aa14.89□□□□□ -0.03
CDC42EP4-201ENST00000335793 RPS4XP62701 263 aaKnown RBP14.89□□□□□ -0.03
CDC42EP4-201ENST00000335793 DLX2Q07687 328 aaPredicted RBP14.89□□□□□ -0.03
CDC42EP4-201ENST00000335793 OLFML2AQ68BL7 652 aa14.89□□□□□ -0.03
CDC42EP4-201ENST00000335793 GLT8D1Q68CQ7 371 aa14.89□□□□□ -0.03
CDC42EP4-201ENST00000335793 SHISA6Q6ZSJ9 500 aa14.89□□□□□ -0.03
CDC42EP4-201ENST00000335793 FAM122BQ7Z309 247 aa14.89□□□□□ -0.03
CDC42EP4-201ENST00000335793 DPPA2Q7Z7J5 298 aa14.89□□□□□ -0.03
CDC42EP4-201ENST00000335793 PRSS35Q8N3Z0 413 aa14.89□□□□□ -0.03
CDC42EP4-201ENST00000335793 TPSD1Q9BZJ3 242 aa14.89□□□□□ -0.03
CDC42EP4-201ENST00000335793 COMMD9Q9P000 198 aa14.89□□□□□ -0.03
CDC42EP4-201ENST00000335793 FITM1A5D6W6 292 aa14.88□□□□□ -0.03
CDC42EP4-201ENST00000335793 NSA2O95478 260 aaKnown RBP14.88□□□□□ -0.03
CDC42EP4-201ENST00000335793 CYB5AP00167 134 aa14.88□□□□□ -0.03
CDC42EP4-201ENST00000335793 GABRA1P14867 456 aa14.88□□□□□ -0.03
CDC42EP4-201ENST00000335793 NPBWR1P48145 328 aa14.88□□□□□ -0.03
CDC42EP4-201ENST00000335793 EIF2B1Q14232 305 aaKnown RBP14.88□□□□□ -0.03
CDC42EP4-201ENST00000335793 USF2Q15853 346 aaPredicted RBP14.88□□□□□ -0.03
CDC42EP4-201ENST00000335793 ACKR1Q16570 336 aa14.88□□□□□ -0.03
CDC42EP4-201ENST00000335793 NKAIN2Q5VXU1 208 aa14.88□□□□□ -0.03
CDC42EP4-201ENST00000335793 SLC18B1Q6NT16 456 aa14.88□□□□□ -0.03
CDC42EP4-201ENST00000335793 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.88□□□□□ -0.03
CDC42EP4-201ENST00000335793 BEST3Q8N1M1 668 aa14.88□□□□□ -0.03
CDC42EP4-201ENST00000335793 THAP3Q8WTV1 239 aaPredicted RBP14.88□□□□□ -0.03
CDC42EP4-201ENST00000335793 S100PBPQ96BU1 408 aa14.88□□□□□ -0.03
CDC42EP4-201ENST00000335793 C4orf45Q96LM5 186 aa14.88□□□□□ -0.03
CDC42EP4-201ENST00000335793 TMEM185BQ9H7F4 350 aa14.88□□□□□ -0.03
CDC42EP4-201ENST00000335793 PDE7BQ9NP56 450 aa14.88□□□□□ -0.03
CDC42EP4-201ENST00000335793 OPN4Q9UHM6 478 aa14.88□□□□□ -0.03
CDC42EP4-201ENST00000335793 FBXL3Q9UKT7 428 aa14.88□□□□□ -0.03
CDC42EP4-201ENST00000335793 PLEKHA6Q9Y2H5 1048 aa14.88□□□□□ -0.03
CDC42EP4-201ENST00000335793 IL5P05113 134 aa14.88□□□□□ -0.03
CDC42EP4-201ENST00000335793 ZNF28P17035 718 aa14.88□□□□□ -0.03
CDC42EP4-201ENST00000335793 CDPF1Q6NVV7 123 aa14.88□□□□□ -0.03
CDC42EP4-201ENST00000335793 H3F3CQ6NXT2 135 aa14.88□□□□□ -0.03
CDC42EP4-201ENST00000335793 ZNF248Q8NDW4 579 aa14.88□□□□□ -0.03
CDC42EP4-201ENST00000335793 OR11A1Q9GZK7 315 aa14.88□□□□□ -0.03
CDC42EP4-201ENST00000335793 POFUT1Q9H488 388 aa14.88□□□□□ -0.03
CDC42EP4-201ENST00000335793 ASF1BQ9NVP2 202 aa14.88□□□□□ -0.03
CDC42EP4-201ENST00000335793 MUC22E2RYF6 1773 aaPredicted RBP14.88□□□□□ -0.03
CDC42EP4-201ENST00000335793 C2orf72A6NCS6 295 aa14.88□□□□□ -0.03
CDC42EP4-201ENST00000335793 ZNF823P16415 610 aa14.88□□□□□ -0.03
CDC42EP4-201ENST00000335793 RAB5BP61020 215 aa14.88□□□□□ -0.03
CDC42EP4-201ENST00000335793 FUT7Q11130 342 aa14.88□□□□□ -0.03
CDC42EP4-201ENST00000335793 NCMAPQ5T1S8 102 aa14.88□□□□□ -0.03
CDC42EP4-201ENST00000335793 ZNF660Q6AZW8 331 aaPredicted RBP14.88□□□□□ -0.03
CDC42EP4-201ENST00000335793 ANKRD16Q6P6B7 361 aa14.88□□□□□ -0.03
CDC42EP4-201ENST00000335793 KCTD18Q6PI47 426 aaPredicted RBP14.88□□□□□ -0.03
CDC42EP4-201ENST00000335793 MAMDC2Q7Z304 686 aaPredicted RBP14.88□□□□□ -0.03
CDC42EP4-201ENST00000335793 FAM46BQ96A09 425 aa14.88□□□□□ -0.03
CDC42EP4-201ENST00000335793 LURAP1Q96LR2 239 aa14.88□□□□□ -0.03
CDC42EP4-201ENST00000335793 POTEKPQ9BYX7 375 aa14.88□□□□□ -0.03
CDC42EP4-201ENST00000335793 RNF215Q9Y6U7 377 aa14.88□□□□□ -0.03
CDC42EP4-201ENST00000335793 FREM3P0C091 2139 aa14.87□□□□□ -0.03
CDC42EP4-201ENST00000335793 SPTY2D1-AS1A0A0U1RR47 76 aa14.87□□□□□ -0.03
CDC42EP4-201ENST00000335793 MEX3AA1L020 520 aaKnown RBP14.87□□□□□ -0.03
CDC42EP4-201ENST00000335793 CXorf65A6NEN9 183 aa14.87□□□□□ -0.03
CDC42EP4-201ENST00000335793 PLCXD2Q0VAA5 305 aa14.87□□□□□ -0.03
CDC42EP4-201ENST00000335793 NSDHLQ15738 373 aa14.87□□□□□ -0.03
CDC42EP4-201ENST00000335793 C1orf189Q5VU69 101 aa14.87□□□□□ -0.03
CDC42EP4-201ENST00000335793 B3GNTL1Q67FW5 361 aaPredicted RBP14.87□□□□□ -0.03
CDC42EP4-201ENST00000335793 TMEM17Q86X19 198 aa14.87□□□□□ -0.03
CDC42EP4-201ENST00000335793 ZNF615Q8N8J6 731 aa14.87□□□□□ -0.03
CDC42EP4-201ENST00000335793 OR10H5Q8NGA6 315 aa14.87□□□□□ -0.03
CDC42EP4-201ENST00000335793 OTOSQ8NHW6 89 aa14.87□□□□□ -0.03
CDC42EP4-201ENST00000335793 TCTN2Q96GX1 697 aa14.87□□□□□ -0.03
CDC42EP4-201ENST00000335793 TAS2R4Q9NYW5 299 aa14.87□□□□□ -0.03
CDC42EP4-201ENST00000335793 UPB1Q9UBR1 384 aa14.87□□□□□ -0.03
CDC42EP4-201ENST00000335793 CD207Q9UJ71 328 aa14.87□□□□□ -0.03
CDC42EP4-201ENST00000335793 KCNK7Q9Y2U2 307 aa14.87□□□□□ -0.03
CDC42EP4-201ENST00000335793 HS3ST3A1Q9Y663 406 aa14.87□□□□□ -0.03
CDC42EP4-201ENST00000335793 SLCO1B1Q9Y6L6 691 aa14.87□□□□□ -0.03
CDC42EP4-201ENST00000335793 KIF26BQ2KJY2 2108 aa14.87□□□□□ -0.03
CDC42EP4-201ENST00000335793 EPOPA6NHQ4 379 aa14.87□□□□□ -0.03
CDC42EP4-201ENST00000335793 HEXBP07686 556 aa14.87□□□□□ -0.03
CDC42EP4-201ENST00000335793 PPP3CBP16298 524 aa14.87□□□□□ -0.03
CDC42EP4-201ENST00000335793 FZD2Q14332 565 aa14.87□□□□□ -0.03
CDC42EP4-201ENST00000335793 SHHQ15465 462 aa14.87□□□□□ -0.03
CDC42EP4-201ENST00000335793 PRTGQ2VWP7 1150 aa14.87□□□□□ -0.03
CDC42EP4-201ENST00000335793 TMEM205Q6UW68 189 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms