RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 CAPZA2P47755 286 aa18.76■□□□□ 0.59
TPM1-204ENST00000334895 ASCL1P50553 236 aa18.76■□□□□ 0.59
TPM1-204ENST00000334895 PCBD1P61457 104 aa18.76■□□□□ 0.59
TPM1-204ENST00000334895 SRSF1Q07955 248 aaKnown RBP eCLIP18.76■□□□□ 0.592e-10■■■□□ 14.7
TPM1-204ENST00000334895 SCRN3Q0VDG4 424 aa18.76■□□□□ 0.59
TPM1-204ENST00000334895 NEDD8Q15843 81 aa18.76■□□□□ 0.59
TPM1-204ENST00000334895 ZNF774Q6NX45 483 aa18.76■□□□□ 0.59
TPM1-204ENST00000334895 PLEKHG7Q6ZR37 379 aa18.76■□□□□ 0.59
TPM1-204ENST00000334895 VASH1Q7L8A9 365 aaPredicted RBP18.76■□□□□ 0.59
TPM1-204ENST00000334895 SYS1Q8N2H4 156 aa18.76■□□□□ 0.59
TPM1-204ENST00000334895 C17orf78Q8N4C9 275 aa18.76■□□□□ 0.59
TPM1-204ENST00000334895 AKR7LQ8NHP1 331 aa18.76■□□□□ 0.59
TPM1-204ENST00000334895 GATAD2BQ8WXI9 593 aa18.76■□□□□ 0.59
TPM1-204ENST00000334895 RNF166Q96A37 237 aaPredicted RBP18.76■□□□□ 0.59
TPM1-204ENST00000334895 S100PBPQ96BU1 408 aa18.76■□□□□ 0.59
TPM1-204ENST00000334895 KCNN2Q9H2S1 579 aa18.76■□□□□ 0.59
TPM1-204ENST00000334895 ACOXLQ9NUZ1 547 aa18.76■□□□□ 0.59
TPM1-204ENST00000334895 SLC5A6Q9Y289 635 aa18.76■□□□□ 0.59
TPM1-204ENST00000334895 PRR14LQ5THK1 2151 aa18.76■□□□□ 0.59
TPM1-204ENST00000334895 ARPC4-TTLL3A0A0A6YYG9 625 aa18.75■□□□□ 0.59
TPM1-204ENST00000334895 NKX2-6A6NCS4 301 aa18.75■□□□□ 0.59
TPM1-204ENST00000334895 OR5H1A6NKK0 313 aa18.75■□□□□ 0.59
TPM1-204ENST00000334895 J3QLW9 94 aa18.75■□□□□ 0.59
TPM1-204ENST00000334895 ZG16O60844 167 aa18.75■□□□□ 0.59
TPM1-204ENST00000334895 CD79AP11912 226 aa18.75■□□□□ 0.59
TPM1-204ENST00000334895 ZNF19P17023 458 aa18.75■□□□□ 0.59
TPM1-204ENST00000334895 IL32P24001 234 aa18.75■□□□□ 0.59
TPM1-204ENST00000334895 WNT4P56705 351 aa18.75■□□□□ 0.59
TPM1-204ENST00000334895 ACTA2P62736 377 aa18.75■□□□□ 0.59
TPM1-204ENST00000334895 ACTG2P63267 376 aa18.75■□□□□ 0.59
TPM1-204ENST00000334895 FBXL19-AS1Q494R0 122 aa18.75■□□□□ 0.59
TPM1-204ENST00000334895 PABPC1L2AQ5JQF8 200 aa18.75■□□□□ 0.59
TPM1-204ENST00000334895 ELFN2Q5R3F8 820 aa18.75■□□□□ 0.59
TPM1-204ENST00000334895 UBE2UQ5VVX9 321 aa18.75■□□□□ 0.59
TPM1-204ENST00000334895 KCTD18Q6PI47 426 aaPredicted RBP18.75■□□□□ 0.59
TPM1-204ENST00000334895 ZNF679Q8IYX0 411 aa18.75■□□□□ 0.59
TPM1-204ENST00000334895 ZNF75AQ96N20 296 aa18.75■□□□□ 0.59
TPM1-204ENST00000334895 ELOVL3Q9HB03 270 aa18.75■□□□□ 0.59
TPM1-204ENST00000334895 CENPMQ9NSP4 180 aa18.75■□□□□ 0.59
TPM1-204ENST00000334895 DDX28Q9NUL7 540 aaKnown RBP18.75■□□□□ 0.59
TPM1-204ENST00000334895 PLEK2Q9NYT0 353 aa18.75■□□□□ 0.59
TPM1-204ENST00000334895 GNG8Q9UK08 70 aa18.75■□□□□ 0.59
TPM1-204ENST00000334895 IKZF2Q9UKS7 526 aa18.75■□□□□ 0.59
TPM1-204ENST00000334895 FBXL3Q9UKT7 428 aa18.75■□□□□ 0.59
TPM1-204ENST00000334895 LRP12Q9Y561 859 aa18.75■□□□□ 0.59
TPM1-204ENST00000334895 METTL15A6NJ78 407 aa18.74■□□□□ 0.59
TPM1-204ENST00000334895 SGCEO43556 437 aa18.74■□□□□ 0.59
TPM1-204ENST00000334895 SYNGR3O43761 229 aa18.74■□□□□ 0.59
TPM1-204ENST00000334895 SULT1C4O75897 302 aa18.74■□□□□ 0.59
TPM1-204ENST00000334895 INMTO95050 263 aa18.74■□□□□ 0.59
TPM1-204ENST00000334895 UBL3O95164 117 aa18.74■□□□□ 0.59
TPM1-204ENST00000334895 CLPTM1O96005 669 aa18.74■□□□□ 0.59
TPM1-204ENST00000334895 TFAP2AP05549 437 aa18.74■□□□□ 0.59
TPM1-204ENST00000334895 HOXB1P14653 301 aaPredicted RBP18.74■□□□□ 0.59
TPM1-204ENST00000334895 UGT2B10P36537 528 aa18.74■□□□□ 0.59
TPM1-204ENST00000334895 RAB1AP62820 205 aa18.74■□□□□ 0.59
TPM1-204ENST00000334895 RAB35Q15286 201 aa18.74■□□□□ 0.59
TPM1-204ENST00000334895 TMPRSS11AQ6ZMR5 421 aa18.74■□□□□ 0.59
TPM1-204ENST00000334895 DPPA2Q7Z7J5 298 aa18.74■□□□□ 0.59
TPM1-204ENST00000334895 MDP1Q86V88 176 aa18.74■□□□□ 0.59
TPM1-204ENST00000334895 CPEB3Q8NE35 698 aaKnown RBP18.74■□□□□ 0.59
TPM1-204ENST00000334895 PELI1Q96FA3 418 aa18.74■□□□□ 0.59
TPM1-204ENST00000334895 HDHD5Q9BXW7 423 aa18.74■□□□□ 0.59
TPM1-204ENST00000334895 RNF121Q9H920 327 aa18.74■□□□□ 0.59
TPM1-204ENST00000334895 SCOCQ9UIL1 159 aa18.74■□□□□ 0.59
TPM1-204ENST00000334895 RTTNQ86VV8 2226 aa18.74■□□□□ 0.59
TPM1-204ENST00000334895 OR6C6A6NF89 314 aa18.74■□□□□ 0.59
TPM1-204ENST00000334895 ZNF878C9JN71 531 aa18.74■□□□□ 0.59
TPM1-204ENST00000334895 E9PI62 339 aa18.74■□□□□ 0.59
TPM1-204ENST00000334895 DOK2O60496 412 aa18.74■□□□□ 0.59
TPM1-204ENST00000334895 KRT8P05787 483 aa18.74■□□□□ 0.59
TPM1-204ENST00000334895 UBE2NP61088 152 aaKnown RBP18.74■□□□□ 0.59
TPM1-204ENST00000334895 SPHARQ15513 63 aa18.74■□□□□ 0.59
TPM1-204ENST00000334895 MED22Q15528 200 aa18.74■□□□□ 0.59
TPM1-204ENST00000334895 RSPO1Q2MKA7 263 aaPredicted RBP18.74■□□□□ 0.59
TPM1-204ENST00000334895 LIPNQ5VXI9 398 aa18.74■□□□□ 0.59
TPM1-204ENST00000334895 C22orf34Q6ZV56 151 aa18.74■□□□□ 0.59
TPM1-204ENST00000334895 KRT77Q7Z794 578 aa18.74■□□□□ 0.59
TPM1-204ENST00000334895 ZNF584Q8IVC4 421 aa18.74■□□□□ 0.59
TPM1-204ENST00000334895 CCDC36Q8IYA8 594 aa18.74■□□□□ 0.59
TPM1-204ENST00000334895 ITLN2Q8WWU7 325 aaPredicted RBP18.74■□□□□ 0.59
TPM1-204ENST00000334895 NANOS1Q8WY41 292 aaKnown RBP18.74■□□□□ 0.59
TPM1-204ENST00000334895 MUL1Q969V5 352 aa18.74■□□□□ 0.59
TPM1-204ENST00000334895 MROQ9BYG7 248 aa18.74■□□□□ 0.59
TPM1-204ENST00000334895 ACTR6Q9GZN1 396 aa18.74■□□□□ 0.59
TPM1-204ENST00000334895 GRIP1Q9Y3R0 1128 aa18.74■□□□□ 0.59
TPM1-204ENST00000334895 USP9XQ93008 2570 aaPredicted RBP18.73■□□□□ 0.59
TPM1-204ENST00000334895 MT-ND5P03915 603 aa18.73■□□□□ 0.59
TPM1-204ENST00000334895 JUNBP17275 347 aaPredicted RBP18.73■□□□□ 0.59
TPM1-204ENST00000334895 ARR3P36575 388 aa18.73■□□□□ 0.59
TPM1-204ENST00000334895 GSG1Q2KHT4 349 aa18.73■□□□□ 0.59
TPM1-204ENST00000334895 DEGS2Q6QHC5 323 aa18.73■□□□□ 0.59
TPM1-204ENST00000334895 RHOUQ7L0Q8 258 aa18.73■□□□□ 0.59
TPM1-204ENST00000334895 ZNF367Q7RTV3 350 aa18.73■□□□□ 0.59
TPM1-204ENST00000334895 KLBQ86Z14 1044 aa18.73■□□□□ 0.59
TPM1-204ENST00000334895 YIPF7Q8N8F6 280 aa18.73■□□□□ 0.59
TPM1-204ENST00000334895 CA5BP1Q8WTZ4 195 aa18.73■□□□□ 0.59
TPM1-204ENST00000334895 SLC7A6Q92536 515 aa18.73■□□□□ 0.59
TPM1-204ENST00000334895 ATF6BQ99941 703 aa18.73■□□□□ 0.59
TPM1-204ENST00000334895 HDHD2Q9H0R4 259 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms