RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 RPL12P30050 165 aaKnown RBP9.53□□□□□ -0.88
SPTBN1-201ENST00000333896 TAS2R38P59533 333 aa9.53□□□□□ -0.88
SPTBN1-201ENST00000333896 CLEC12BQ2HXU8 276 aa9.53□□□□□ -0.88
SPTBN1-201ENST00000333896 UBE3DQ7Z6J8 389 aa9.53□□□□□ -0.88
SPTBN1-201ENST00000333896 LYG2Q86SG7 212 aa9.53□□□□□ -0.88
SPTBN1-201ENST00000333896 LRRTM3Q86VH5 581 aa9.53□□□□□ -0.88
SPTBN1-201ENST00000333896 MFSD4AQ8N468 514 aa9.53□□□□□ -0.88
SPTBN1-201ENST00000333896 HSD17B8Q92506 261 aa9.53□□□□□ -0.88
SPTBN1-201ENST00000333896 PEX11GQ96HA9 241 aa9.53□□□□□ -0.88
SPTBN1-201ENST00000333896 KCNJ15Q99712 375 aa9.53□□□□□ -0.88
SPTBN1-201ENST00000333896 LRIT1Q9P2V4 623 aa9.53□□□□□ -0.88
SPTBN1-201ENST00000333896 MCRIP1C9JLW8 97 aa9.53□□□□□ -0.88
SPTBN1-201ENST00000333896 ZNF354AO60765 605 aaPredicted RBP9.53□□□□□ -0.88
SPTBN1-201ENST00000333896 TBX18O95935 607 aa9.53□□□□□ -0.88
SPTBN1-201ENST00000333896 ATXN1LP0C7T5 689 aaKnown RBP9.53□□□□□ -0.88
SPTBN1-201ENST00000333896 FAM3BP58499 235 aaPredicted RBP9.53□□□□□ -0.88
SPTBN1-201ENST00000333896 TBPL1P62380 186 aa9.53□□□□□ -0.88
SPTBN1-201ENST00000333896 TREML2Q5T2D2 321 aa9.53□□□□□ -0.88
SPTBN1-201ENST00000333896 LINC00052Q96N35 136 aa9.53□□□□□ -0.88
SPTBN1-201ENST00000333896 GPR78Q96P69 363 aa9.53□□□□□ -0.88
SPTBN1-201ENST00000333896 IKZF4Q9H2S9 585 aa9.53□□□□□ -0.88
SPTBN1-201ENST00000333896 GNG12Q9UBI6 72 aa9.53□□□□□ -0.88
SPTBN1-201ENST00000333896 ZNF320A2RRD8 509 aa9.53□□□□□ -0.88
SPTBN1-201ENST00000333896 MFNGO00587 321 aa9.53□□□□□ -0.88
SPTBN1-201ENST00000333896 CSNK1A1P48729 337 aa9.53□□□□□ -0.88
SPTBN1-201ENST00000333896 CNEP1R1Q8N9A8 125 aa9.53□□□□□ -0.88
SPTBN1-201ENST00000333896 SH3RF2Q8TEC5 729 aa9.53□□□□□ -0.88
SPTBN1-201ENST00000333896 ZNF845Q96IR2 970 aaPredicted RBP9.53□□□□□ -0.88
SPTBN1-201ENST00000333896 HEYLQ9NQ87 328 aaPredicted RBP9.53□□□□□ -0.88
SPTBN1-201ENST00000333896 FAM206AQ9NX38 181 aa9.53□□□□□ -0.88
SPTBN1-201ENST00000333896 SLCO3A1Q9UIG8 710 aa9.53□□□□□ -0.88
SPTBN1-201ENST00000333896 SSSCA1O60232 199 aa9.52□□□□□ -0.88
SPTBN1-201ENST00000333896 MMP2P08253 660 aa9.52□□□□□ -0.88
SPTBN1-201ENST00000333896 SCAND1P57086 179 aa9.52□□□□□ -0.88
SPTBN1-201ENST00000333896 TRILQ7L0X0 811 aa9.52□□□□□ -0.88
SPTBN1-201ENST00000333896 OR51S1Q8NGJ8 323 aa9.52□□□□□ -0.88
SPTBN1-201ENST00000333896 ADAMTS18Q8TE60 1221 aa9.52□□□□□ -0.88
SPTBN1-201ENST00000333896 KHSRPQ92945 711 aaKnown RBP eCLIP9.52□□□□□ -0.887e-8■□□□□ 9.2
SPTBN1-201ENST00000333896 LRRC3BQ96PB8 259 aa9.52□□□□□ -0.88
SPTBN1-201ENST00000333896 TRIB1Q96RU8 372 aa9.52□□□□□ -0.88
SPTBN1-201ENST00000333896 MRPL13Q9BYD1 178 aaKnown RBP9.52□□□□□ -0.88
SPTBN1-201ENST00000333896 TMEM38AQ9H6F2 299 aa9.52□□□□□ -0.88
SPTBN1-201ENST00000333896 LOC390937A0A1W2PQ73 354 aa9.52□□□□□ -0.88
SPTBN1-201ENST00000333896 MFSD2BA6NFX1 497 aa9.52□□□□□ -0.88
SPTBN1-201ENST00000333896 VNN1O95497 513 aa9.52□□□□□ -0.88
SPTBN1-201ENST00000333896 ZXDBP98169 803 aa9.52□□□□□ -0.88
SPTBN1-201ENST00000333896 OR4D1Q15615 310 aa9.52□□□□□ -0.88
SPTBN1-201ENST00000333896 UBE2V2Q15819 145 aa9.52□□□□□ -0.88
SPTBN1-201ENST00000333896 MIDNQ504T8 468 aa9.52□□□□□ -0.88
SPTBN1-201ENST00000333896 SLC35D3Q5M8T2 416 aa9.52□□□□□ -0.88
SPTBN1-201ENST00000333896 DHRS7BQ6IAN0 325 aaPredicted RBP9.52□□□□□ -0.88
SPTBN1-201ENST00000333896 FAM57BQ71RH2 274 aa9.52□□□□□ -0.88
SPTBN1-201ENST00000333896 PDZD7Q9H5P4 517 aa9.52□□□□□ -0.88
SPTBN1-201ENST00000333896 TMEM231Q9H6L2 316 aa9.52□□□□□ -0.88
SPTBN1-201ENST00000333896 RGPD3A6NKT7 1758 aaPredicted RBP9.52□□□□□ -0.89
SPTBN1-201ENST00000333896 RGPD4Q7Z3J3 1758 aa9.52□□□□□ -0.89
SPTBN1-201ENST00000333896 KDM4EB2RXH2 506 aaPredicted RBP9.52□□□□□ -0.89
SPTBN1-201ENST00000333896 SLC6A1P30531 599 aa9.52□□□□□ -0.89
SPTBN1-201ENST00000333896 TRA2BP62995 288 aaKnown RBP9.52□□□□□ -0.89
SPTBN1-201ENST00000333896 TMEM65Q6PI78 240 aa9.52□□□□□ -0.89
SPTBN1-201ENST00000333896 CPEB2Q7Z5Q1 589 aaKnown RBP9.52□□□□□ -0.89
SPTBN1-201ENST00000333896 TMEM123Q8N131 208 aa9.52□□□□□ -0.89
SPTBN1-201ENST00000333896 HUS1BQ8NHY5 278 aa9.52□□□□□ -0.89
SPTBN1-201ENST00000333896 OIT3Q8WWZ8 545 aa9.52□□□□□ -0.89
SPTBN1-201ENST00000333896 GHSRQ92847 366 aa9.52□□□□□ -0.89
SPTBN1-201ENST00000333896 RAB7BQ96AH8 199 aa9.52□□□□□ -0.89
SPTBN1-201ENST00000333896 DLL4Q9NR61 685 aa9.52□□□□□ -0.89
SPTBN1-201ENST00000333896 OR7C1O76099 320 aaPredicted RBP9.52□□□□□ -0.89
SPTBN1-201ENST00000333896 ABOP16442 354 aa9.52□□□□□ -0.89
SPTBN1-201ENST00000333896 OR52B6Q8NGF0 335 aa9.52□□□□□ -0.89
SPTBN1-201ENST00000333896 S1PR3Q99500 378 aa9.52□□□□□ -0.89
SPTBN1-201ENST00000333896 ATP5SQ99766 215 aa9.52□□□□□ -0.89
SPTBN1-201ENST00000333896 ACTR3CQ9C0K3 210 aaPredicted RBP9.52□□□□□ -0.89
SPTBN1-201ENST00000333896 NECAP2Q9NVZ3 263 aa9.52□□□□□ -0.89
SPTBN1-201ENST00000333896 IL17BQ9UHF5 180 aa9.52□□□□□ -0.89
SPTBN1-201ENST00000333896 SH2D7A6NKC9 451 aaPredicted RBP9.52□□□□□ -0.89
SPTBN1-201ENST00000333896 GPR37L1O60883 481 aa9.52□□□□□ -0.89
SPTBN1-201ENST00000333896 SNRPBP14678 240 aaKnown RBP9.52□□□□□ -0.89
SPTBN1-201ENST00000333896 ATP1B3P54709 279 aa9.52□□□□□ -0.89
SPTBN1-201ENST00000333896 VGLL4Q14135 290 aa9.52□□□□□ -0.89
SPTBN1-201ENST00000333896 TXNRD3NBQ6F5E7 133 aa9.52□□□□□ -0.89
SPTBN1-201ENST00000333896 RXFP4Q8TDU9 374 aa9.52□□□□□ -0.89
SPTBN1-201ENST00000333896 SMOQ99835 787 aa9.52□□□□□ -0.89
SPTBN1-201ENST00000333896 SLC17A5Q9NRA2 495 aa9.52□□□□□ -0.89
SPTBN1-201ENST00000333896 MT-ATP6P00846 226 aa9.52□□□□□ -0.89
SPTBN1-201ENST00000333896 CHRM2P08172 466 aa9.52□□□□□ -0.89
SPTBN1-201ENST00000333896 ERVFC1-1P60608 527 aa9.52□□□□□ -0.89
SPTBN1-201ENST00000333896 TMEM184AQ6ZMB5 413 aa9.52□□□□□ -0.89
SPTBN1-201ENST00000333896 MMP21Q8N119 569 aa9.52□□□□□ -0.89
SPTBN1-201ENST00000333896 PGBD5Q8N414 524 aa9.52□□□□□ -0.89
SPTBN1-201ENST00000333896 ACY3Q96HD9 319 aa9.52□□□□□ -0.89
SPTBN1-201ENST00000333896 SERINC2Q96SA4 455 aa9.52□□□□□ -0.89
SPTBN1-201ENST00000333896 SELENOIQ9C0D9 397 aa9.52□□□□□ -0.89
SPTBN1-201ENST00000333896 LPAR3Q9UBY5 353 aa9.52□□□□□ -0.89
SPTBN1-201ENST00000333896 SLC6A8P48029 635 aa9.52□□□□□ -0.89
SPTBN1-201ENST00000333896 CDKN2DP55273 166 aa9.52□□□□□ -0.89
SPTBN1-201ENST00000333896 MTCP1P56278 107 aa9.52□□□□□ -0.89
SPTBN1-201ENST00000333896 ZNF528Q3MIS6 628 aa9.52□□□□□ -0.89
SPTBN1-201ENST00000333896 LRP11Q86VZ4 500 aa9.52□□□□□ -0.89
SPTBN1-201ENST00000333896 SLC22A24Q8N4F4 322 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms