RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 PTGER4P35408 488 aa16.54■□□□□ 0.24
EXOSC3-201ENST00000327304 CLRN1P58418 232 aa16.54■□□□□ 0.24
EXOSC3-201ENST00000327304 SF3B4Q15427 424 aaKnown RBP eCLIP16.54■□□□□ 0.24
EXOSC3-201ENST00000327304 DDI2Q5TDH0 399 aa16.54■□□□□ 0.24
EXOSC3-201ENST00000327304 GLB1L2Q8IW92 636 aa16.54■□□□□ 0.24
EXOSC3-201ENST00000327304 GCNT2Q8N0V5 402 aa16.54■□□□□ 0.24
EXOSC3-201ENST00000327304 ACOT12Q8WYK0 555 aa16.54■□□□□ 0.24
EXOSC3-201ENST00000327304 PDCD1LG2Q9BQ51 273 aa16.54■□□□□ 0.24
EXOSC3-201ENST00000327304 MROQ9BYG7 248 aa16.54■□□□□ 0.24
EXOSC3-201ENST00000327304 TINAGQ9UJW2 476 aa16.54■□□□□ 0.24
EXOSC3-201ENST00000327304 COL6A6A6NMZ7 2263 aa16.54■□□□□ 0.24
EXOSC3-201ENST00000327304 IGKV1D-43A0A0B4J1Z2 117 aa16.54■□□□□ 0.24
EXOSC3-201ENST00000327304 NR2C1P13056 603 aa16.54■□□□□ 0.24
EXOSC3-201ENST00000327304 AGTR1P30556 359 aa16.54■□□□□ 0.24
EXOSC3-201ENST00000327304 HIST3H3Q16695 136 aa16.54■□□□□ 0.24
EXOSC3-201ENST00000327304 RGS21Q2M5E4 152 aa16.54■□□□□ 0.24
EXOSC3-201ENST00000327304 PHYHD1Q5SRE7 291 aa16.54■□□□□ 0.24
EXOSC3-201ENST00000327304 NUFIP2Q7Z417 695 aaKnown RBP16.54■□□□□ 0.24
EXOSC3-201ENST00000327304 NSMAFQ92636 917 aa16.54■□□□□ 0.24
EXOSC3-201ENST00000327304 GMPPAQ96IJ6 420 aaPredicted RBP16.54■□□□□ 0.24
EXOSC3-201ENST00000327304 MAP6Q96JE9 813 aa16.54■□□□□ 0.24
EXOSC3-201ENST00000327304 DOCK7Q96N67 2140 aa16.54■□□□□ 0.24
EXOSC3-201ENST00000327304 FOXN4Q96NZ1 517 aa16.54■□□□□ 0.24
EXOSC3-201ENST00000327304 AMELYQ99218 206 aa16.54■□□□□ 0.24
EXOSC3-201ENST00000327304 SLCO1C1Q9NYB5 712 aa16.54■□□□□ 0.24
EXOSC3-201ENST00000327304 FRRS1LQ9P0K9 344 aa16.54■□□□□ 0.24
EXOSC3-201ENST00000327304 CFAP46Q8IYW2 2715 aa16.53■□□□□ 0.24
EXOSC3-201ENST00000327304 ARPC4-TTLL3A0A0A6YYG9 625 aa16.53■□□□□ 0.24
EXOSC3-201ENST00000327304 MBD3L4A6NDZ8 208 aaPredicted RBP16.53■□□□□ 0.24
EXOSC3-201ENST00000327304 MBD3L3A6NE82 208 aaPredicted RBP16.53■□□□□ 0.24
EXOSC3-201ENST00000327304 MBD3L5A6NJ08 208 aaPredicted RBP16.53■□□□□ 0.24
EXOSC3-201ENST00000327304 SS18L1O75177 396 aaPredicted RBP16.53■□□□□ 0.24
EXOSC3-201ENST00000327304 RPP14O95059 124 aaKnown RBP16.53■□□□□ 0.24
EXOSC3-201ENST00000327304 ZFPL1O95159 310 aa16.53■□□□□ 0.24
EXOSC3-201ENST00000327304 CSNK1A1P48729 337 aa16.53■□□□□ 0.24
EXOSC3-201ENST00000327304 CAV3P56539 151 aa16.53■□□□□ 0.24
EXOSC3-201ENST00000327304 RBPJQ06330 500 aa16.53■□□□□ 0.24
EXOSC3-201ENST00000327304 EIF2B1Q14232 305 aaKnown RBP16.53■□□□□ 0.24
EXOSC3-201ENST00000327304 MEP1BQ16820 701 aa16.53■□□□□ 0.24
EXOSC3-201ENST00000327304 ZNF181Q2M3W8 571 aa16.53■□□□□ 0.24
EXOSC3-201ENST00000327304 MZT2AQ6P582 158 aa16.53■□□□□ 0.24
EXOSC3-201ENST00000327304 LAX1Q8IWV1 398 aa16.53■□□□□ 0.24
EXOSC3-201ENST00000327304 ST6GALNAC3Q8NDV1 305 aa16.53■□□□□ 0.24
EXOSC3-201ENST00000327304 OR13C5Q8NGS8 318 aa16.53■□□□□ 0.24
EXOSC3-201ENST00000327304 OR52N5Q8NH56 324 aa16.53■□□□□ 0.24
EXOSC3-201ENST00000327304 OR5AK2Q8NH90 309 aa16.53■□□□□ 0.24
EXOSC3-201ENST00000327304 MBD3L2Q8NHZ7 208 aaPredicted RBP16.53■□□□□ 0.24
EXOSC3-201ENST00000327304 TMEM54Q969K7 222 aa16.53■□□□□ 0.24
EXOSC3-201ENST00000327304 KCTD12Q96CX2 325 aaKnown RBP16.53■□□□□ 0.24
EXOSC3-201ENST00000327304 ATF6BQ99941 703 aa16.53■□□□□ 0.24
EXOSC3-201ENST00000327304 ABHD6Q9BV23 337 aa16.53■□□□□ 0.24
EXOSC3-201ENST00000327304 TP63Q9H3D4 680 aaPredicted RBP16.53■□□□□ 0.24
EXOSC3-201ENST00000327304 ELOVL3Q9HB03 270 aa16.53■□□□□ 0.24
EXOSC3-201ENST00000327304 GP6Q9HCN6 339 aa16.53■□□□□ 0.24
EXOSC3-201ENST00000327304 ABCB9Q9NP78 766 aa16.53■□□□□ 0.24
EXOSC3-201ENST00000327304 UGT2A1Q9Y4X1 527 aa16.53■□□□□ 0.24
EXOSC3-201ENST00000327304 TMEM212A6NML5 194 aa16.52■□□□□ 0.24
EXOSC3-201ENST00000327304 TMCC2O75069 709 aa16.52■□□□□ 0.24
EXOSC3-201ENST00000327304 SLC43A1O75387 559 aa16.52■□□□□ 0.24
EXOSC3-201ENST00000327304 UPK1BO75841 260 aa16.52■□□□□ 0.24
EXOSC3-201ENST00000327304 MPZL1O95297 269 aa16.52■□□□□ 0.24
EXOSC3-201ENST00000327304 LAP3P28838 519 aa16.52■□□□□ 0.24
EXOSC3-201ENST00000327304 CCR9P51686 369 aa16.52■□□□□ 0.24
EXOSC3-201ENST00000327304 PPP3R1P63098 170 aa16.52■□□□□ 0.24
EXOSC3-201ENST00000327304 GUSBP1Q15486 140 aa16.52■□□□□ 0.24
EXOSC3-201ENST00000327304 FAM27D1Q5T7N8 215 aa16.52■□□□□ 0.24
EXOSC3-201ENST00000327304 SLC25A47Q6Q0C1 308 aa16.52■□□□□ 0.24
EXOSC3-201ENST00000327304 C20orf196Q8IYI0 205 aa16.52■□□□□ 0.24
EXOSC3-201ENST00000327304 OR6N1Q8NGY5 312 aa16.52■□□□□ 0.24
EXOSC3-201ENST00000327304 OR2G2Q8NGZ5 317 aa16.52■□□□□ 0.24
EXOSC3-201ENST00000327304 INTS12Q96CB8 462 aaKnown RBP16.52■□□□□ 0.24
EXOSC3-201ENST00000327304 BBC3Q96PG8 261 aaPredicted RBP16.52■□□□□ 0.24
EXOSC3-201ENST00000327304 MIXL1Q9H2W2 232 aa16.52■□□□□ 0.24
EXOSC3-201ENST00000327304 SH3BGRL2Q9UJC5 107 aa16.52■□□□□ 0.24
EXOSC3-201ENST00000327304 FOXD3Q9UJU5 478 aaPredicted RBP16.52■□□□□ 0.24
EXOSC3-201ENST00000327304 SMIM30A4D0T7 59 aa16.52■□□□□ 0.23
EXOSC3-201ENST00000327304 ISPDA4D126 451 aa16.52■□□□□ 0.23
EXOSC3-201ENST00000327304 ZNF879B4DU55 563 aa16.52■□□□□ 0.23
EXOSC3-201ENST00000327304 MRPL33O75394 65 aaKnown RBP16.52■□□□□ 0.23
EXOSC3-201ENST00000327304 ZNF254O75437 659 aa16.52■□□□□ 0.23
EXOSC3-201ENST00000327304 TOXO94900 526 aa16.52■□□□□ 0.23
EXOSC3-201ENST00000327304 HOXD4P09016 255 aaPredicted RBP16.52■□□□□ 0.23
EXOSC3-201ENST00000327304 IFITM3Q01628 133 aa16.52■□□□□ 0.23
EXOSC3-201ENST00000327304 ZNF544Q6NX49 715 aa16.52■□□□□ 0.23
EXOSC3-201ENST00000327304 LRFN4Q6PJG9 635 aa16.52■□□□□ 0.23
EXOSC3-201ENST00000327304 DEGS2Q6QHC5 323 aa16.52■□□□□ 0.23
EXOSC3-201ENST00000327304 KRT77Q7Z794 578 aa16.52■□□□□ 0.23
EXOSC3-201ENST00000327304 CHPT1Q8WUD6 406 aa16.52■□□□□ 0.23
EXOSC3-201ENST00000327304 HSD17B8Q92506 261 aa16.52■□□□□ 0.23
EXOSC3-201ENST00000327304 CCDC32Q9BV29 185 aa16.52■□□□□ 0.23
EXOSC3-201ENST00000327304 COMMD4Q9H0A8 199 aa16.52■□□□□ 0.23
EXOSC3-201ENST00000327304 GLRX2Q9NS18 164 aa16.52■□□□□ 0.23
EXOSC3-201ENST00000327304 GLTPQ9NZD2 209 aa16.52■□□□□ 0.23
EXOSC3-201ENST00000327304 ARHGAP21Q5T5U3 1957 aa16.51■□□□□ 0.23
EXOSC3-201ENST00000327304 OR4C45A6NMZ5 311 aa16.51■□□□□ 0.23
EXOSC3-201ENST00000327304 NCR1O76036 304 aa16.51■□□□□ 0.23
EXOSC3-201ENST00000327304 MAPK3P27361 379 aaPredicted RBP16.51■□□□□ 0.23
EXOSC3-201ENST00000327304 RIDAP52758 137 aaKnown RBP16.51■□□□□ 0.23
EXOSC3-201ENST00000327304 OR2A2Q6IF42 318 aa16.51■□□□□ 0.23
EXOSC3-201ENST00000327304 LRRN1Q6UXK5 716 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms