RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 NPIPA1Q9UND3 350 aa12.66□□□□□ -0.38
VRK3-201ENST00000316763 CACNA1CQ13936 2221 aa12.66□□□□□ -0.38
VRK3-201ENST00000316763 ALPK2Q86TB3 2170 aa12.66□□□□□ -0.38
VRK3-201ENST00000316763 MED19A0JLT2 244 aaPredicted RBP12.66□□□□□ -0.38
VRK3-201ENST00000316763 FTCDNL1E5RQL4 147 aa12.66□□□□□ -0.38
VRK3-201ENST00000316763 TLX3O43711 291 aaPredicted RBP12.66□□□□□ -0.38
VRK3-201ENST00000316763 CXCL3P19876 107 aa12.66□□□□□ -0.38
VRK3-201ENST00000316763 GNG2P59768 71 aa12.66□□□□□ -0.38
VRK3-201ENST00000316763 CLN3Q13286 438 aa12.66□□□□□ -0.38
VRK3-201ENST00000316763 GLT8D1Q68CQ7 371 aa12.66□□□□□ -0.38
VRK3-201ENST00000316763 ANKRD16Q6P6B7 361 aa12.66□□□□□ -0.38
VRK3-201ENST00000316763 BEST4Q8NFU0 473 aa12.66□□□□□ -0.38
VRK3-201ENST00000316763 OR52N5Q8NH56 324 aa12.66□□□□□ -0.38
VRK3-201ENST00000316763 SPACA9Q96E40 222 aaPredicted RBP12.66□□□□□ -0.38
VRK3-201ENST00000316763 GPR137Q96N19 417 aa12.66□□□□□ -0.38
VRK3-201ENST00000316763 NOX3Q9HBY0 568 aa12.66□□□□□ -0.38
VRK3-201ENST00000316763 GPN1Q9HCN4 374 aaPredicted RBP12.66□□□□□ -0.38
VRK3-201ENST00000316763 P4HTMQ9NXG6 502 aa12.66□□□□□ -0.38
VRK3-201ENST00000316763 IL17BQ9UHF5 180 aa12.66□□□□□ -0.38
VRK3-201ENST00000316763 FBXL3Q9UKT7 428 aa12.66□□□□□ -0.38
VRK3-201ENST00000316763 SLC22A13Q9Y226 551 aa12.66□□□□□ -0.38
VRK3-201ENST00000316763 COA3Q9Y2R0 106 aaPredicted RBP12.66□□□□□ -0.38
VRK3-201ENST00000316763 MRPS18BQ9Y676 258 aaKnown RBP12.66□□□□□ -0.38
VRK3-201ENST00000316763 ASPMQ8IZT6 3477 aa12.66□□□□□ -0.38
VRK3-201ENST00000316763 NPIPB13A6NJU9 1138 aa12.65□□□□□ -0.38
VRK3-201ENST00000316763 NPIPB4C9JG80 1138 aa12.65□□□□□ -0.38
VRK3-201ENST00000316763 H3BSH0 61 aa12.65□□□□□ -0.38
VRK3-201ENST00000316763 SLC17A2O00624 439 aa12.65□□□□□ -0.38
VRK3-201ENST00000316763 ZNF208O43345 1280 aa12.65□□□□□ -0.38
VRK3-201ENST00000316763 VEGFCP49767 419 aa12.65□□□□□ -0.38
VRK3-201ENST00000316763 MAP2K6P52564 334 aa12.65□□□□□ -0.38
VRK3-201ENST00000316763 Q0VFX4 171 aa12.65□□□□□ -0.38
VRK3-201ENST00000316763 CHAF1BQ13112 559 aa12.65□□□□□ -0.38
VRK3-201ENST00000316763 OR7A5Q15622 319 aa12.65□□□□□ -0.38
VRK3-201ENST00000316763 ETFDHQ16134 617 aa12.65□□□□□ -0.38
VRK3-201ENST00000316763 OR5M10Q6IEU7 315 aa12.65□□□□□ -0.38
VRK3-201ENST00000316763 OR7E24Q6IFN5 339 aa12.65□□□□□ -0.38
VRK3-201ENST00000316763 DNM1P46Q6ZS02 220 aa12.65□□□□□ -0.38
VRK3-201ENST00000316763 VASH2Q86V25 355 aa12.65□□□□□ -0.38
VRK3-201ENST00000316763 CATSPERDQ86XM0 798 aa12.65□□□□□ -0.38
VRK3-201ENST00000316763 PIAS4Q8N2W9 510 aaPredicted RBP12.65□□□□□ -0.38
VRK3-201ENST00000316763 OR51D1Q8NGF3 324 aa12.65□□□□□ -0.38
VRK3-201ENST00000316763 ADAMTS17Q8TE56 1095 aa12.65□□□□□ -0.38
VRK3-201ENST00000316763 ASB10Q8WXI3 467 aa12.65□□□□□ -0.38
VRK3-201ENST00000316763 MED30Q96HR3 178 aa12.65□□□□□ -0.38
VRK3-201ENST00000316763 BEX1Q9HBH7 125 aa12.65□□□□□ -0.38
VRK3-201ENST00000316763 FLVCR2Q9UPI3 526 aa12.65□□□□□ -0.38
VRK3-201ENST00000316763 LRP12Q9Y561 859 aa12.65□□□□□ -0.38
VRK3-201ENST00000316763 FREM2Q5SZK8 3169 aa12.64□□□□□ -0.39
VRK3-201ENST00000316763 LOC100289279A0A1B0GTE1 492 aa12.64□□□□□ -0.39
VRK3-201ENST00000316763 H0YC42 278 aa12.64□□□□□ -0.39
VRK3-201ENST00000316763 MS4A18H0YCH9 400 aa12.64□□□□□ -0.39
VRK3-201ENST00000316763 ARPC1BO15143 372 aaKnown RBP12.64□□□□□ -0.39
VRK3-201ENST00000316763 TSC22D2O75157 780 aa12.64□□□□□ -0.39
VRK3-201ENST00000316763 CSF1P09603 554 aa12.64□□□□□ -0.39
VRK3-201ENST00000316763 LIFP15018 202 aa12.64□□□□□ -0.39
VRK3-201ENST00000316763 DNASE1P24855 282 aa12.64□□□□□ -0.39
VRK3-201ENST00000316763 MSX1P28360 303 aa12.64□□□□□ -0.39
VRK3-201ENST00000316763 DLX5P56178 289 aa12.64□□□□□ -0.39
VRK3-201ENST00000316763 MLF1P58340 268 aa12.64□□□□□ -0.39
VRK3-201ENST00000316763 SRSF6Q13247 344 aaKnown RBP12.64□□□□□ -0.39
VRK3-201ENST00000316763 TOMM20Q15388 145 aa12.64□□□□□ -0.39
VRK3-201ENST00000316763 MS4A18Q3C1V0 323 aa12.64□□□□□ -0.39
VRK3-201ENST00000316763 H3F3CQ6NXT2 135 aa12.64□□□□□ -0.39
VRK3-201ENST00000316763 OR10G3Q8NGC4 313 aa12.64□□□□□ -0.39
VRK3-201ENST00000316763 FAM3DQ96BQ1 224 aa12.64□□□□□ -0.39
VRK3-201ENST00000316763 ZNF436Q9C0F3 470 aaPredicted RBP12.64□□□□□ -0.39
VRK3-201ENST00000316763 CHST11Q9NPF2 352 aa12.64□□□□□ -0.39
VRK3-201ENST00000316763 DLL4Q9NR61 685 aa12.64□□□□□ -0.39
VRK3-201ENST00000316763 SDHAF3Q9NRP4 125 aa12.64□□□□□ -0.39
VRK3-201ENST00000316763 PCSK5Q92824 1860 aa12.64□□□□□ -0.39
VRK3-201ENST00000316763 MEGF11A6BM72 1044 aa12.64□□□□□ -0.39
VRK3-201ENST00000316763 GGT3PA6NGU5 568 aa12.64□□□□□ -0.39
VRK3-201ENST00000316763 H7C417 338 aa12.64□□□□□ -0.39
VRK3-201ENST00000316763 MASP2O00187 686 aa12.64□□□□□ -0.39
VRK3-201ENST00000316763 CTAG2O75638 210 aa12.64□□□□□ -0.39
VRK3-201ENST00000316763 PNPP00491 289 aa12.64□□□□□ -0.39
VRK3-201ENST00000316763 HPXP02790 462 aa12.64□□□□□ -0.39
VRK3-201ENST00000316763 IL5P05113 134 aa12.64□□□□□ -0.39
VRK3-201ENST00000316763 FREM3P0C091 2139 aa12.64□□□□□ -0.39
VRK3-201ENST00000316763 DCTDP32321 178 aa12.64□□□□□ -0.39
VRK3-201ENST00000316763 POU3F4P49335 361 aa12.64□□□□□ -0.39
VRK3-201ENST00000316763 TLE3Q04726 772 aa12.64□□□□□ -0.39
VRK3-201ENST00000316763 TMEM255AQ5JRV8 349 aa12.64□□□□□ -0.39
VRK3-201ENST00000316763 SLC25A25Q6KCM7 469 aa12.64□□□□□ -0.39
VRK3-201ENST00000316763 GLDNQ6ZMI3 551 aaPredicted RBP12.64□□□□□ -0.39
VRK3-201ENST00000316763 RPS19BP1Q86WX3 136 aaKnown RBP12.64□□□□□ -0.39
VRK3-201ENST00000316763 OR8H1Q8NGG4 311 aa12.64□□□□□ -0.39
VRK3-201ENST00000316763 RADILQ96JH8 1075 aa12.64□□□□□ -0.39
VRK3-201ENST00000316763 C5orf34Q96MH7 638 aa12.64□□□□□ -0.39
VRK3-201ENST00000316763 UTP23Q9BRU9 249 aaKnown RBP12.64□□□□□ -0.39
VRK3-201ENST00000316763 POTEKPQ9BYX7 375 aa12.64□□□□□ -0.39
VRK3-201ENST00000316763 KLRF1Q9NZS2 232 aa12.64□□□□□ -0.39
VRK3-201ENST00000316763 MED11Q9P086 117 aa12.64□□□□□ -0.39
VRK3-201ENST00000316763 DKK4Q9UBT3 224 aa12.64□□□□□ -0.39
VRK3-201ENST00000316763 MTFP1Q9UDX5 166 aa12.64□□□□□ -0.39
VRK3-201ENST00000316763 NPTNQ9Y639 398 aa12.64□□□□□ -0.39
VRK3-201ENST00000316763 R4GMQ9 66 aa12.64□□□□□ -0.39
VRK3-201ENST00000316763 C2orf72A6NCS6 295 aa12.63□□□□□ -0.39
VRK3-201ENST00000316763 AQP8O94778 261 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms