RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 OR6C6A6NF89 314 aa12.23□□□□□ -0.45
RFFL-201ENST00000315249 NOTOA8MTQ0 251 aa12.23□□□□□ -0.45
RFFL-201ENST00000315249 ZNF169Q14929 603 aaPredicted RBP12.23□□□□□ -0.45
RFFL-201ENST00000315249 FCRL6Q6DN72 434 aa12.23□□□□□ -0.45
RFFL-201ENST00000315249 KIRREL2Q6UWL6 708 aa12.23□□□□□ -0.45
RFFL-201ENST00000315249 ZNF573Q86YE8 665 aa12.23□□□□□ -0.45
RFFL-201ENST00000315249 COX14Q96I36 57 aa12.23□□□□□ -0.45
RFFL-201ENST00000315249 MMP28Q9H239 520 aa12.23□□□□□ -0.45
RFFL-201ENST00000315249 EXO1Q9UQ84 846 aaKnown RBP12.23□□□□□ -0.45
RFFL-201ENST00000315249 SERTM1A2A2V5 107 aa12.23□□□□□ -0.45
RFFL-201ENST00000315249 YIF1AO95070 293 aa12.23□□□□□ -0.45
RFFL-201ENST00000315249 SRMP19623 302 aa12.23□□□□□ -0.45
RFFL-201ENST00000315249 RNPS1Q15287 305 aaKnown RBP12.23□□□□□ -0.45
RFFL-201ENST00000315249 ENTHD1Q8IYW4 607 aa12.23□□□□□ -0.45
RFFL-201ENST00000315249 BBS1Q8NFJ9 593 aa12.23□□□□□ -0.45
RFFL-201ENST00000315249 ST8SIA4Q92187 359 aa12.23□□□□□ -0.45
RFFL-201ENST00000315249 TEAD3Q99594 435 aa12.23□□□□□ -0.45
RFFL-201ENST00000315249 ZFP64Q9NPA5 681 aa12.23□□□□□ -0.45
RFFL-201ENST00000315249 OMGP23515 440 aa12.23□□□□□ -0.45
RFFL-201ENST00000315249 C3AR1Q16581 482 aa12.23□□□□□ -0.45
RFFL-201ENST00000315249 LIPNQ5VXI9 398 aa12.23□□□□□ -0.45
RFFL-201ENST00000315249 BEST4Q8NFU0 473 aa12.23□□□□□ -0.45
RFFL-201ENST00000315249 NRTNQ99748 197 aa12.23□□□□□ -0.45
RFFL-201ENST00000315249 SERTAD4Q9NUC0 356 aa12.23□□□□□ -0.45
RFFL-201ENST00000315249 ARPC5O15511 151 aa12.22□□□□□ -0.45
RFFL-201ENST00000315249 SPINT1O43278 529 aa12.22□□□□□ -0.45
RFFL-201ENST00000315249 CLDN1O95832 211 aa12.22□□□□□ -0.45
RFFL-201ENST00000315249 SERPINA7P05543 415 aa12.22□□□□□ -0.45
RFFL-201ENST00000315249 SFTPCP11686 197 aa12.22□□□□□ -0.45
RFFL-201ENST00000315249 NKX6-1P78426 367 aaPredicted RBP12.22□□□□□ -0.45
RFFL-201ENST00000315249 RDH5Q92781 318 aa12.22□□□□□ -0.45
RFFL-201ENST00000315249 TAS2R4Q9NYW5 299 aa12.22□□□□□ -0.45
RFFL-201ENST00000315249 GPR55Q9Y2T6 319 aaPredicted RBP12.22□□□□□ -0.45
RFFL-201ENST00000315249 YIF1BQ5BJH7 314 aa12.22□□□□□ -0.45
RFFL-201ENST00000315249 ZNF628Q5EBL2 1059 aa12.22□□□□□ -0.45
RFFL-201ENST00000315249 RHBDD2Q6NTF9 364 aa12.22□□□□□ -0.45
RFFL-201ENST00000315249 ZNF793Q6ZN11 406 aa12.22□□□□□ -0.45
RFFL-201ENST00000315249 ZNF683Q8IZ20 524 aa12.22□□□□□ -0.45
RFFL-201ENST00000315249 WDSUB1Q8N9V3 476 aa12.22□□□□□ -0.45
RFFL-201ENST00000315249 SLC39A7Q92504 469 aa12.22□□□□□ -0.45
RFFL-201ENST00000315249 ANKRD9Q96BM1 317 aaPredicted RBP12.22□□□□□ -0.45
RFFL-201ENST00000315249 S1PR5Q9H228 398 aa12.22□□□□□ -0.45
RFFL-201ENST00000315249 TXNIPQ9H3M7 391 aa12.22□□□□□ -0.45
RFFL-201ENST00000315249 CNR1P21554 472 aa12.22□□□□□ -0.45
RFFL-201ENST00000315249 DYRK1AQ13627 763 aa12.22□□□□□ -0.45
RFFL-201ENST00000315249 HACD4Q5VWC8 232 aa12.22□□□□□ -0.45
RFFL-201ENST00000315249 SMAP2Q8WU79 429 aaPredicted RBP12.22□□□□□ -0.45
RFFL-201ENST00000315249 OR5B12Q96R08 314 aa12.22□□□□□ -0.45
RFFL-201ENST00000315249 ACOXLQ9NUZ1 547 aa12.22□□□□□ -0.45
RFFL-201ENST00000315249 UBQLN2Q9UHD9 624 aa12.22□□□□□ -0.45
RFFL-201ENST00000315249 LINC01387J3KSC0 135 aa12.22□□□□□ -0.45
RFFL-201ENST00000315249 UBL3O95164 117 aa12.22□□□□□ -0.45
RFFL-201ENST00000315249 GSG1Q2KHT4 349 aa12.22□□□□□ -0.45
RFFL-201ENST00000315249 LIMS2Q7Z4I7 341 aa12.22□□□□□ -0.45
RFFL-201ENST00000315249 ZDHHC23Q8IYP9 409 aa12.22□□□□□ -0.45
RFFL-201ENST00000315249 TCTEX1D2Q8WW35 142 aa12.22□□□□□ -0.45
RFFL-201ENST00000315249 ING1Q9UK53 422 aaPredicted RBP12.22□□□□□ -0.45
RFFL-201ENST00000315249 A3GALT2U3KPV4 340 aa12.22□□□□□ -0.45
RFFL-201ENST00000315249 PARP14Q460N5 1801 aa12.22□□□□□ -0.45
RFFL-201ENST00000315249 A0A1W2PQF6 199 aa12.22□□□□□ -0.45
RFFL-201ENST00000315249 MOSPD3O75425 235 aa12.22□□□□□ -0.45
RFFL-201ENST00000315249 SRP9P49458 86 aaKnown RBP12.22□□□□□ -0.45
RFFL-201ENST00000315249 PLA2G7Q13093 441 aa12.22□□□□□ -0.45
RFFL-201ENST00000315249 OR52H1Q8NGJ2 320 aa12.22□□□□□ -0.45
RFFL-201ENST00000315249 DPCDQ9BVM2 203 aaPredicted RBP12.22□□□□□ -0.45
RFFL-201ENST00000315249 TNFRSF12AQ9NP84 129 aa12.22□□□□□ -0.45
RFFL-201ENST00000315249 CLEC2DQ9UHP7 191 aa12.22□□□□□ -0.45
RFFL-201ENST00000315249 ATF4P18848 351 aaPredicted RBP12.22□□□□□ -0.45
RFFL-201ENST00000315249 RAB11AP62491 216 aa12.22□□□□□ -0.45
RFFL-201ENST00000315249 OR2Y1Q8NGV0 311 aa12.22□□□□□ -0.45
RFFL-201ENST00000315249 KCNG2Q9UJ96 466 aa12.22□□□□□ -0.45
RFFL-201ENST00000315249 RCE1Q9Y256 329 aa12.22□□□□□ -0.45
RFFL-201ENST00000315249 PHF1O43189 567 aaPredicted RBP12.21□□□□□ -0.45
RFFL-201ENST00000315249 PMPCAQ10713 525 aa12.21□□□□□ -0.45
RFFL-201ENST00000315249 JMJD6Q6NYC1 403 aaPredicted RBP12.21□□□□□ -0.45
RFFL-201ENST00000315249 OGFOD3Q6PK18 319 aa12.21□□□□□ -0.45
RFFL-201ENST00000315249 SSX9Q7RTT3 188 aa12.21□□□□□ -0.45
RFFL-201ENST00000315249 CLDN22Q8N7P3 220 aa12.21□□□□□ -0.45
RFFL-201ENST00000315249 OR10D3Q8NH80 312 aa12.21□□□□□ -0.45
RFFL-201ENST00000315249 CCL17Q92583 94 aa12.21□□□□□ -0.45
RFFL-201ENST00000315249 TMEM43Q9BTV4 400 aa12.21□□□□□ -0.45
RFFL-201ENST00000315249 ACER3Q9NUN7 267 aa12.21□□□□□ -0.45
RFFL-201ENST00000315249 PPP1R3CQ9UQK1 317 aa12.21□□□□□ -0.45
RFFL-201ENST00000315249 SSUH2Q9Y2M2 353 aa12.21□□□□□ -0.45
RFFL-201ENST00000315249 C21orf140B9A014 251 aa12.21□□□□□ -0.45
RFFL-201ENST00000315249 GPR137BO60478 399 aa12.21□□□□□ -0.45
RFFL-201ENST00000315249 OPRL1P41146 370 aa12.21□□□□□ -0.45
RFFL-201ENST00000315249 HAAOP46952 286 aa12.21□□□□□ -0.45
RFFL-201ENST00000315249 GSK3AP49840 483 aa12.21□□□□□ -0.45
RFFL-201ENST00000315249 RAB13P51153 203 aa12.21□□□□□ -0.45
RFFL-201ENST00000315249 AGERQ15109 404 aa12.21□□□□□ -0.45
RFFL-201ENST00000315249 OR51A2Q8NGJ7 313 aa12.21□□□□□ -0.45
RFFL-201ENST00000315249 FAM3DQ96BQ1 224 aa12.21□□□□□ -0.45
RFFL-201ENST00000315249 ZNF419Q96HQ0 510 aaPredicted RBP12.21□□□□□ -0.45
RFFL-201ENST00000315249 SLCO5A1Q9H2Y9 848 aa12.21□□□□□ -0.45
RFFL-201ENST00000315249 PDCD11Q14690 1871 aaKnown RBP12.21□□□□□ -0.45
RFFL-201ENST00000315249 HPP00738 406 aa12.21□□□□□ -0.45
RFFL-201ENST00000315249 SPI1P17947 270 aa12.21□□□□□ -0.45
RFFL-201ENST00000315249 ZNF133P52736 654 aaPredicted RBP12.21□□□□□ -0.45
RFFL-201ENST00000315249 MRPS10P82664 201 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms