RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 CMC2Q9NRP2 79 aa10.32□□□□□ -0.76
SCFD1-201ENST00000311943 TVP23BQ9NYZ1 205 aa10.32□□□□□ -0.76
SCFD1-201ENST00000311943 KLHDC2Q9Y2U9 406 aa10.32□□□□□ -0.76
SCFD1-201ENST00000311943 CHD3Q12873 2000 aaKnown RBP10.32□□□□□ -0.76
SCFD1-201ENST00000311943 IGHV3-64DA0A0J9YX35 117 aa10.31□□□□□ -0.76
SCFD1-201ENST00000311943 ARRDC5A6NEK1 342 aa10.31□□□□□ -0.76
SCFD1-201ENST00000311943 C12orf71A8MTZ7 269 aa10.31□□□□□ -0.76
SCFD1-201ENST00000311943 SELENOFO60613 162 aa10.31□□□□□ -0.76
SCFD1-201ENST00000311943 NCR1O76036 304 aa10.31□□□□□ -0.76
SCFD1-201ENST00000311943 SPARCP09486 303 aa10.31□□□□□ -0.76
SCFD1-201ENST00000311943 SLC2A1P11166 492 aa10.31□□□□□ -0.76
SCFD1-201ENST00000311943 GUCA1AP43080 201 aaPredicted RBP10.31□□□□□ -0.76
SCFD1-201ENST00000311943 CRISP1P54107 249 aa10.31□□□□□ -0.76
SCFD1-201ENST00000311943 AQP6Q13520 282 aa10.31□□□□□ -0.76
SCFD1-201ENST00000311943 KCNMB1Q16558 191 aa10.31□□□□□ -0.76
SCFD1-201ENST00000311943 CARTPTQ16568 116 aa10.31□□□□□ -0.76
SCFD1-201ENST00000311943 ZIK1Q3SY52 487 aaPredicted RBP10.31□□□□□ -0.76
SCFD1-201ENST00000311943 SLC27A4Q6P1M0 643 aa10.31□□□□□ -0.76
SCFD1-201ENST00000311943 FNDC8Q8TC99 324 aa10.31□□□□□ -0.76
SCFD1-201ENST00000311943 C4orf45Q96LM5 186 aa10.31□□□□□ -0.76
SCFD1-201ENST00000311943 ZNF442Q9H7R0 627 aa10.31□□□□□ -0.76
SCFD1-201ENST00000311943 PAPOLBQ9NRJ5 636 aaKnown RBP10.31□□□□□ -0.76
SCFD1-201ENST00000311943 FAIMQ9NVQ4 179 aa10.31□□□□□ -0.76
SCFD1-201ENST00000311943 KIF17Q9P2E2 1029 aa10.31□□□□□ -0.76
SCFD1-201ENST00000311943 CYB5R1Q9UHQ9 305 aa10.31□□□□□ -0.76
SCFD1-201ENST00000311943 CMAHPQ9Y471 501 aa10.31□□□□□ -0.76
SCFD1-201ENST00000311943 CACNG2Q9Y698 323 aa10.31□□□□□ -0.76
SCFD1-201ENST00000311943 CR1P17927 2039 aa10.31□□□□□ -0.76
SCFD1-201ENST00000311943 F5H5K5 113 aa10.31□□□□□ -0.76
SCFD1-201ENST00000311943 PSMD9O00233 223 aa10.31□□□□□ -0.76
SCFD1-201ENST00000311943 MAGEB4O15481 346 aaPredicted RBP10.31□□□□□ -0.76
SCFD1-201ENST00000311943 IDH3BO43837 385 aa10.31□□□□□ -0.76
SCFD1-201ENST00000311943 AHCYL1O43865 530 aa10.31□□□□□ -0.76
SCFD1-201ENST00000311943 HPXP02790 462 aa10.31□□□□□ -0.76
SCFD1-201ENST00000311943 ANXA8P13928 327 aa10.31□□□□□ -0.76
SCFD1-201ENST00000311943 PAX1P15863 534 aa10.31□□□□□ -0.76
SCFD1-201ENST00000311943 NUDT6P53370 316 aa10.31□□□□□ -0.76
SCFD1-201ENST00000311943 HIST1H3AP68431 136 aa10.31□□□□□ -0.76
SCFD1-201ENST00000311943 HOXA4Q00056 320 aaPredicted RBP10.31□□□□□ -0.76
SCFD1-201ENST00000311943 COX10Q12887 443 aa10.31□□□□□ -0.76
SCFD1-201ENST00000311943 KLHL12Q53G59 568 aa10.31□□□□□ -0.76
SCFD1-201ENST00000311943 HIST2H3PS2Q5TEC6 136 aa10.31□□□□□ -0.76
SCFD1-201ENST00000311943 KDM4DQ6B0I6 523 aa10.31□□□□□ -0.76
SCFD1-201ENST00000311943 RGS7BPQ6MZT1 257 aaPredicted RBP10.31□□□□□ -0.76
SCFD1-201ENST00000311943 DNM1P46Q6ZS02 220 aa10.31□□□□□ -0.76
SCFD1-201ENST00000311943 HIST2H3AQ71DI3 136 aa10.31□□□□□ -0.76
SCFD1-201ENST00000311943 DCXRQ7Z4W1 244 aa10.31□□□□□ -0.76
SCFD1-201ENST00000311943 LRRC75A-AS1Q8N1F1 130 aa10.31□□□□□ -0.76
SCFD1-201ENST00000311943 RFLNBQ8N5W9 214 aa10.31□□□□□ -0.76
SCFD1-201ENST00000311943 OR1F12Q8NHA8 337 aa10.31□□□□□ -0.76
SCFD1-201ENST00000311943 MARS2Q96GW9 593 aaKnown RBP10.31□□□□□ -0.76
SCFD1-201ENST00000311943 SLC29A1Q99808 456 aa10.31□□□□□ -0.76
SCFD1-201ENST00000311943 NDEL1Q9GZM8 345 aa10.31□□□□□ -0.76
SCFD1-201ENST00000311943 TAAR3PQ9P1P4 343 aa10.31□□□□□ -0.76
SCFD1-201ENST00000311943 KCNG2Q9UJ96 466 aa10.31□□□□□ -0.76
SCFD1-201ENST00000311943 N6AMT1Q9Y5N5 214 aa10.31□□□□□ -0.76
SCFD1-201ENST00000311943 ANK3Q12955 4377 aaKnown RBP10.31□□□□□ -0.76
SCFD1-201ENST00000311943 TLN2Q9Y4G6 2542 aa10.3□□□□□ -0.76
SCFD1-201ENST00000311943 OR6C6A6NF89 314 aa10.3□□□□□ -0.76
SCFD1-201ENST00000311943 PRR32B1ATL7 298 aa10.3□□□□□ -0.76
SCFD1-201ENST00000311943 ZNF593O00488 134 aaPredicted RBP10.3□□□□□ -0.76
SCFD1-201ENST00000311943 SNAP29O95721 258 aa10.3□□□□□ -0.76
SCFD1-201ENST00000311943 MRPL3P09001 348 aaKnown RBP10.3□□□□□ -0.76
SCFD1-201ENST00000311943 NR2C1P13056 603 aa10.3□□□□□ -0.76
SCFD1-201ENST00000311943 NAA10P41227 235 aaPredicted RBP10.3□□□□□ -0.76
SCFD1-201ENST00000311943 LSM6P62312 80 aaKnown RBP10.3□□□□□ -0.76
SCFD1-201ENST00000311943 SNRPD2P62316 118 aaKnown RBP10.3□□□□□ -0.76
SCFD1-201ENST00000311943 EFNB3Q15768 340 aa10.3□□□□□ -0.76
SCFD1-201ENST00000311943 RPL13AP3Q6NVV1 102 aa10.3□□□□□ -0.76
SCFD1-201ENST00000311943 ZDHHC13Q8IUH4 622 aa10.3□□□□□ -0.76
SCFD1-201ENST00000311943 IL17RDQ8NFM7 739 aa10.3□□□□□ -0.76
SCFD1-201ENST00000311943 KLF14Q8TD94 323 aaPredicted RBP10.3□□□□□ -0.76
SCFD1-201ENST00000311943 TRMT61AQ96FX7 289 aaKnown RBP10.3□□□□□ -0.76
SCFD1-201ENST00000311943 IL4I1Q96RQ9 567 aa10.3□□□□□ -0.76
SCFD1-201ENST00000311943 PITX2Q99697 317 aa10.3□□□□□ -0.76
SCFD1-201ENST00000311943 YY1AP1Q9H869 796 aa10.3□□□□□ -0.76
SCFD1-201ENST00000311943 ZNF556Q9HAH1 456 aa10.3□□□□□ -0.76
SCFD1-201ENST00000311943 MSL2Q9HCI7 577 aa10.3□□□□□ -0.76
SCFD1-201ENST00000311943 KRT84Q9NSB2 600 aa10.3□□□□□ -0.76
SCFD1-201ENST00000311943 DCAF16Q9NXF7 216 aa10.3□□□□□ -0.76
SCFD1-201ENST00000311943 EDARQ9UNE0 448 aa10.3□□□□□ -0.76
SCFD1-201ENST00000311943 A0A1W2PPW3 197 aa10.29□□□□□ -0.76
SCFD1-201ENST00000311943 B9A039 149 aa10.29□□□□□ -0.76
SCFD1-201ENST00000311943 H7C417 338 aa10.29□□□□□ -0.76
SCFD1-201ENST00000311943 EI24O14681 340 aa10.29□□□□□ -0.76
SCFD1-201ENST00000311943 APOL3O95236 402 aa10.29□□□□□ -0.76
SCFD1-201ENST00000311943 ABHD16AO95870 558 aa10.29□□□□□ -0.76
SCFD1-201ENST00000311943 COL8A2P25067 703 aa10.29□□□□□ -0.76
SCFD1-201ENST00000311943 PPP1CBP62140 327 aa10.29□□□□□ -0.76
SCFD1-201ENST00000311943 CCL8P80075 99 aa10.29□□□□□ -0.76
SCFD1-201ENST00000311943 PPP2R2BQ00005 443 aa10.29□□□□□ -0.76
SCFD1-201ENST00000311943 SNAI3Q3KNW1 292 aa10.29□□□□□ -0.76
SCFD1-201ENST00000311943 SHEQ5VZ18 495 aa10.29□□□□□ -0.76
SCFD1-201ENST00000311943 DPY19L4Q7Z388 723 aa10.29□□□□□ -0.76
SCFD1-201ENST00000311943 ERI1Q8IV48 349 aaKnown RBP10.29□□□□□ -0.76
SCFD1-201ENST00000311943 ALDH16A1Q8IZ83 802 aa10.29□□□□□ -0.76
SCFD1-201ENST00000311943 OR5AS1Q8N127 324 aa10.29□□□□□ -0.76
SCFD1-201ENST00000311943 OR2T4Q8NH00 348 aa10.29□□□□□ -0.76
SCFD1-201ENST00000311943 BDH2Q9BUT1 245 aa10.29□□□□□ -0.76
SCFD1-201ENST00000311943 CDADC1Q9BWV3 514 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms