RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 C5orf49A4QMS7 147 aa11.16□□□□□ -0.62
APTX-201ENST00000309615 OR6C6A6NF89 314 aa11.16□□□□□ -0.62
APTX-201ENST00000309615 SHISA9B4DS77 424 aa11.16□□□□□ -0.62
APTX-201ENST00000309615 PTHP01270 115 aa11.16□□□□□ -0.62
APTX-201ENST00000309615 CCNOP22674 350 aa11.16□□□□□ -0.62
APTX-201ENST00000309615 APLNRP35414 380 aa11.16□□□□□ -0.62
APTX-201ENST00000309615 MTNR1AP48039 350 aa11.16□□□□□ -0.62
APTX-201ENST00000309615 RAB35Q15286 201 aa11.16□□□□□ -0.62
APTX-201ENST00000309615 SMN1Q16637 294 aaKnown RBP11.16□□□□□ -0.62
APTX-201ENST00000309615 ZNF704Q6ZNC4 412 aaPredicted RBP11.16□□□□□ -0.62
APTX-201ENST00000309615 SHFQ7M4L6 423 aa11.16□□□□□ -0.62
APTX-201ENST00000309615 SLC16A9Q7RTY1 509 aa11.16□□□□□ -0.62
APTX-201ENST00000309615 TMEM200AQ86VY9 491 aa11.16□□□□□ -0.62
APTX-201ENST00000309615 CDC20BQ86Y33 519 aa11.16□□□□□ -0.62
APTX-201ENST00000309615 C8orf59Q8N0T1 100 aaPredicted RBP11.16□□□□□ -0.62
APTX-201ENST00000309615 IL17RDQ8NFM7 739 aa11.16□□□□□ -0.62
APTX-201ENST00000309615 OR1F12Q8NHA8 337 aa11.16□□□□□ -0.62
APTX-201ENST00000309615 OTOSQ8NHW6 89 aa11.16□□□□□ -0.62
APTX-201ENST00000309615 ST7LQ8TDW4 575 aa11.16□□□□□ -0.62
APTX-201ENST00000309615 NEUROG1Q92886 237 aa11.16□□□□□ -0.62
APTX-201ENST00000309615 POM121L2Q96KW2 1035 aa11.16□□□□□ -0.62
APTX-201ENST00000309615 Q96MT0 163 aa11.16□□□□□ -0.62
APTX-201ENST00000309615 AMELYQ99218 206 aa11.16□□□□□ -0.62
APTX-201ENST00000309615 KCNS3Q9BQ31 491 aa11.16□□□□□ -0.62
APTX-201ENST00000309615 C1orf198Q9H425 327 aa11.16□□□□□ -0.62
APTX-201ENST00000309615 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.16□□□□□ -0.62
APTX-201ENST00000309615 KLHDC2Q9Y2U9 406 aa11.16□□□□□ -0.62
APTX-201ENST00000309615 DBHP09172 617 aa11.15□□□□□ -0.62
APTX-201ENST00000309615 SBK2P0C263 348 aa11.15□□□□□ -0.62
APTX-201ENST00000309615 SSTR2P30874 369 aa11.15□□□□□ -0.62
APTX-201ENST00000309615 GDI2P50395 445 aaKnown RBP11.15□□□□□ -0.62
APTX-201ENST00000309615 TBC1D28Q2M2D7 210 aa11.15□□□□□ -0.62
APTX-201ENST00000309615 SPATC1Q76KD6 591 aa11.15□□□□□ -0.62
APTX-201ENST00000309615 LILRB1Q8NHL6 650 aaPredicted RBP11.15□□□□□ -0.62
APTX-201ENST00000309615 RNFT2Q96EX2 444 aa11.15□□□□□ -0.62
APTX-201ENST00000309615 ATF6BQ99941 703 aa11.15□□□□□ -0.62
APTX-201ENST00000309615 ABHD6Q9BV23 337 aa11.15□□□□□ -0.62
APTX-201ENST00000309615 HDHD2Q9H0R4 259 aa11.15□□□□□ -0.62
APTX-201ENST00000309615 HSPE1-MOB4S4R3N1 261 aa11.15□□□□□ -0.62
APTX-201ENST00000309615 CELSR2Q9HCU4 2923 aa11.15□□□□□ -0.62
APTX-201ENST00000309615 CADP27708 2225 aa11.15□□□□□ -0.62
APTX-201ENST00000309615 COX5BP10606 129 aa11.15□□□□□ -0.63
APTX-201ENST00000309615 ATP6V1E1P36543 226 aa11.15□□□□□ -0.63
APTX-201ENST00000309615 HSPA13P48723 471 aa11.15□□□□□ -0.63
APTX-201ENST00000309615 HGFACQ04756 655 aa11.15□□□□□ -0.63
APTX-201ENST00000309615 ZNF91Q05481 1191 aa11.15□□□□□ -0.63
APTX-201ENST00000309615 TMED1Q13445 227 aa11.15□□□□□ -0.63
APTX-201ENST00000309615 RSPO1Q2MKA7 263 aaPredicted RBP11.15□□□□□ -0.63
APTX-201ENST00000309615 KRT80Q6KB66 452 aa11.15□□□□□ -0.63
APTX-201ENST00000309615 THAP5Q7Z6K1 395 aa11.15□□□□□ -0.63
APTX-201ENST00000309615 RFLNBQ8N5W9 214 aa11.15□□□□□ -0.63
APTX-201ENST00000309615 ZNF454Q8N9F8 522 aa11.15□□□□□ -0.63
APTX-201ENST00000309615 OR4F15Q8NGB8 312 aa11.15□□□□□ -0.63
APTX-201ENST00000309615 THEM6Q8WUY1 208 aa11.15□□□□□ -0.63
APTX-201ENST00000309615 SLAMF6Q96DU3 332 aa11.15□□□□□ -0.63
APTX-201ENST00000309615 YIPF3Q9GZM5 350 aa11.15□□□□□ -0.63
APTX-201ENST00000309615 CDH20Q9HBT6 801 aa11.15□□□□□ -0.63
APTX-201ENST00000309615 CENPMQ9NSP4 180 aa11.15□□□□□ -0.63
APTX-201ENST00000309615 LAMP5Q9UJQ1 280 aa11.15□□□□□ -0.63
APTX-201ENST00000309615 POU2F3Q9UKI9 436 aa11.15□□□□□ -0.63
APTX-201ENST00000309615 COPS3Q9UNS2 423 aa11.15□□□□□ -0.63
APTX-201ENST00000309615 FBN2P35556 2912 aa11.14□□□□□ -0.63
APTX-201ENST00000309615 SNTNA6NMZ2 147 aa11.14□□□□□ -0.63
APTX-201ENST00000309615 LYNP07948 512 aa11.14□□□□□ -0.63
APTX-201ENST00000309615 DBTP11182 482 aaKnown RBP11.14□□□□□ -0.63
APTX-201ENST00000309615 ALOX5APP20292 161 aa11.14□□□□□ -0.63
APTX-201ENST00000309615 WNT5AP41221 380 aa11.14□□□□□ -0.63
APTX-201ENST00000309615 KRTAP10-9P60411 292 aa11.14□□□□□ -0.63
APTX-201ENST00000309615 POU4F2Q12837 409 aa11.14□□□□□ -0.63
APTX-201ENST00000309615 CDK5R2Q13319 367 aa11.14□□□□□ -0.63
APTX-201ENST00000309615 ZNF672Q499Z4 452 aaPredicted RBP11.14□□□□□ -0.63
APTX-201ENST00000309615 LAIR2Q6ISS4 152 aa11.14□□□□□ -0.63
APTX-201ENST00000309615 SLC35F2Q8IXU6 374 aa11.14□□□□□ -0.63
APTX-201ENST00000309615 OR1J2Q8NGS2 313 aa11.14□□□□□ -0.63
APTX-201ENST00000309615 FBLIM1Q8WUP2 373 aa11.14□□□□□ -0.63
APTX-201ENST00000309615 RNF133Q8WVZ7 376 aa11.14□□□□□ -0.63
APTX-201ENST00000309615 AKAP1Q92667 903 aaKnown RBP eCLIP11.14□□□□□ -0.63
APTX-201ENST00000309615 ZNF184Q99676 751 aaPredicted RBP11.14□□□□□ -0.63
APTX-201ENST00000309615 COQ7Q99807 217 aa11.14□□□□□ -0.63
APTX-201ENST00000309615 ANKRD60Q9BZ19 345 aa11.14□□□□□ -0.63
APTX-201ENST00000309615 OR51B6Q9H340 312 aa11.14□□□□□ -0.63
APTX-201ENST00000309615 DDX28Q9NUL7 540 aaKnown RBP11.14□□□□□ -0.63
APTX-201ENST00000309615 ATPIF1Q9UII2 106 aa11.14□□□□□ -0.63
APTX-201ENST00000309615 ATP23Q9Y6H3 246 aa11.14□□□□□ -0.63
APTX-201ENST00000309615 NBPF19A0A087WUL8 3843 aa11.14□□□□□ -0.63
APTX-201ENST00000309615 ABCA4P78363 2273 aa11.14□□□□□ -0.63
APTX-201ENST00000309615 FAM157BP0CG42 384 aa11.13□□□□□ -0.63
APTX-201ENST00000309615 NR4A1P22736 598 aa11.13□□□□□ -0.63
APTX-201ENST00000309615 GALK2Q01415 458 aa11.13□□□□□ -0.63
APTX-201ENST00000309615 KRTAP27-1Q3LI81 207 aa11.13□□□□□ -0.63
APTX-201ENST00000309615 ZNF101Q8IZC7 436 aa11.13□□□□□ -0.63
APTX-201ENST00000309615 TBX5Q99593 518 aa11.13□□□□□ -0.63
APTX-201ENST00000309615 COPS4Q9BT78 406 aa11.13□□□□□ -0.63
APTX-201ENST00000309615 TTTY10Q9BZA0 68 aa11.13□□□□□ -0.63
APTX-201ENST00000309615 PLEKHF2Q9H8W4 249 aa11.13□□□□□ -0.63
APTX-201ENST00000309615 HRNRQ86YZ3 2850 aaPredicted RBP11.13□□□□□ -0.63
APTX-201ENST00000309615 PRR32B1ATL7 298 aa11.12□□□□□ -0.63
APTX-201ENST00000309615 ZNF878C9JN71 531 aa11.12□□□□□ -0.63
APTX-201ENST00000309615 E7EQL1 145 aa11.12□□□□□ -0.63
APTX-201ENST00000309615 F5H5K5 113 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms