RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 ELFN2Q5R3F8 820 aa19.33■□□□□ 0.68
HOXD4-201ENST00000306324 TTC23Q5W5X9 447 aa19.33■□□□□ 0.68
HOXD4-201ENST00000306324 OR4F15Q8NGB8 312 aa19.33■□□□□ 0.68
HOXD4-201ENST00000306324 OR1F12Q8NHA8 337 aa19.33■□□□□ 0.68
HOXD4-201ENST00000306324 FBXW5Q969U6 566 aa19.33■□□□□ 0.68
HOXD4-201ENST00000306324 MAP6Q96JE9 813 aa19.33■□□□□ 0.68
HOXD4-201ENST00000306324 POM121L2Q96KW2 1035 aa19.33■□□□□ 0.68
HOXD4-201ENST00000306324 ZNF582Q96NG8 517 aaPredicted RBP19.33■□□□□ 0.68
HOXD4-201ENST00000306324 APOL4Q9BPW4 351 aa19.33■□□□□ 0.68
HOXD4-201ENST00000306324 VCX3BQ9H321 246 aa19.33■□□□□ 0.68
HOXD4-201ENST00000306324 AASSQ9UDR5 926 aa19.33■□□□□ 0.68
HOXD4-201ENST00000306324 CSMD2Q7Z408 3487 aa19.32■□□□□ 0.68
HOXD4-201ENST00000306324 E7EQL1 145 aa19.32■□□□□ 0.68
HOXD4-201ENST00000306324 CLIC3O95833 236 aa19.32■□□□□ 0.68
HOXD4-201ENST00000306324 COX5BP10606 129 aa19.32■□□□□ 0.68
HOXD4-201ENST00000306324 SNRPGP62308 76 aaKnown RBP19.32■□□□□ 0.68
HOXD4-201ENST00000306324 HGFACQ04756 655 aa19.32■□□□□ 0.68
HOXD4-201ENST00000306324 SNTB2Q13425 540 aaKnown RBP19.32■□□□□ 0.68
HOXD4-201ENST00000306324 EIF2B1Q14232 305 aaKnown RBP19.32■□□□□ 0.68
HOXD4-201ENST00000306324 PCK2Q16822 640 aa19.32■□□□□ 0.68
HOXD4-201ENST00000306324 VHLLQ6RSH7 139 aa19.32■□□□□ 0.68
HOXD4-201ENST00000306324 SHFQ7M4L6 423 aa19.32■□□□□ 0.68
HOXD4-201ENST00000306324 ENTHD1Q8IYW4 607 aa19.32■□□□□ 0.68
HOXD4-201ENST00000306324 SLC7A6Q92536 515 aa19.32■□□□□ 0.68
HOXD4-201ENST00000306324 ADI1Q9BV57 179 aa19.32■□□□□ 0.68
HOXD4-201ENST00000306324 HDHD2Q9H0R4 259 aa19.32■□□□□ 0.68
HOXD4-201ENST00000306324 OR51B6Q9H340 312 aa19.32■□□□□ 0.68
HOXD4-201ENST00000306324 LIME1Q9H400 295 aa19.32■□□□□ 0.68
HOXD4-201ENST00000306324 SPEF1Q9Y4P9 236 aa19.32■□□□□ 0.68
HOXD4-201ENST00000306324 OR6C6A6NF89 314 aa19.31■□□□□ 0.68
HOXD4-201ENST00000306324 FAM157BP0CG42 384 aa19.31■□□□□ 0.68
HOXD4-201ENST00000306324 SMAP2Q8WU79 429 aaPredicted RBP19.31■□□□□ 0.68
HOXD4-201ENST00000306324 RFKQ969G6 155 aa19.31■□□□□ 0.68
HOXD4-201ENST00000306324 MPZL2O60487 215 aa19.3■□□□□ 0.68
HOXD4-201ENST00000306324 ENTPD6O75354 484 aa19.3■□□□□ 0.68
HOXD4-201ENST00000306324 NR4A1P22736 598 aa19.3■□□□□ 0.68
HOXD4-201ENST00000306324 AQP4P55087 323 aa19.3■□□□□ 0.68
HOXD4-201ENST00000306324 ADARB1P78563 741 aaKnown RBP19.3■□□□□ 0.68
HOXD4-201ENST00000306324 IL5RAQ01344 420 aa19.3■□□□□ 0.68
HOXD4-201ENST00000306324 LURAP1Q96LR2 239 aa19.3■□□□□ 0.68
HOXD4-201ENST00000306324 CNN2Q99439 309 aaKnown RBP19.3■□□□□ 0.68
HOXD4-201ENST00000306324 ATF6BQ99941 703 aa19.3■□□□□ 0.68
HOXD4-201ENST00000306324 PNRC2Q9NPJ4 139 aaKnown RBP19.3■□□□□ 0.68
HOXD4-201ENST00000306324 CA10Q9NS85 328 aa19.3■□□□□ 0.68
HOXD4-201ENST00000306324 WARS2Q9UGM6 360 aaKnown RBP19.3■□□□□ 0.68
HOXD4-201ENST00000306324 DBHP09172 617 aa19.29■□□□□ 0.68
HOXD4-201ENST00000306324 HTR1FP30939 366 aa19.29■□□□□ 0.68
HOXD4-201ENST00000306324 CAPGP40121 348 aa19.29■□□□□ 0.68
HOXD4-201ENST00000306324 GGTLC2Q14390 218 aa19.29■□□□□ 0.68
HOXD4-201ENST00000306324 OCLNQ16625 522 aa19.29■□□□□ 0.68
HOXD4-201ENST00000306324 ZNF691Q5VV52 312 aa19.29■□□□□ 0.68
HOXD4-201ENST00000306324 MEDAGQ5VYS4 303 aa19.29■□□□□ 0.68
HOXD4-201ENST00000306324 SPATC1Q76KD6 591 aa19.29■□□□□ 0.68
HOXD4-201ENST00000306324 SLC16A9Q7RTY1 509 aa19.29■□□□□ 0.68
HOXD4-201ENST00000306324 ZNF611Q8N823 705 aa19.29■□□□□ 0.68
HOXD4-201ENST00000306324 NUP37Q8NFH4 326 aa19.29■□□□□ 0.68
HOXD4-201ENST00000306324 OR10S1Q8NGN2 331 aa19.29■□□□□ 0.68
HOXD4-201ENST00000306324 OTOSQ8NHW6 89 aa19.29■□□□□ 0.68
HOXD4-201ENST00000306324 ST7LQ8TDW4 575 aa19.29■□□□□ 0.68
HOXD4-201ENST00000306324 SLAMF6Q96DU3 332 aa19.29■□□□□ 0.68
HOXD4-201ENST00000306324 COQ7Q99807 217 aa19.29■□□□□ 0.68
HOXD4-201ENST00000306324 CENPMQ9NSP4 180 aa19.29■□□□□ 0.68
HOXD4-201ENST00000306324 EIF3KQ9UBQ5 218 aaKnown RBP19.29■□□□□ 0.68
HOXD4-201ENST00000306324 ATPIF1Q9UII2 106 aa19.29■□□□□ 0.68
HOXD4-201ENST00000306324 GRIP1Q9Y3R0 1128 aa19.29■□□□□ 0.68
HOXD4-201ENST00000306324 GABRB1P18505 474 aa19.28■□□□□ 0.68
HOXD4-201ENST00000306324 FABP6P51161 128 aa19.28■□□□□ 0.68
HOXD4-201ENST00000306324 HCCSP53701 268 aa19.28■□□□□ 0.68
HOXD4-201ENST00000306324 NKX6-1P78426 367 aaPredicted RBP19.28■□□□□ 0.68
HOXD4-201ENST00000306324 SLC25A30Q5SVS4 291 aa19.28■□□□□ 0.68
HOXD4-201ENST00000306324 OR51G2Q8NGK0 314 aa19.28■□□□□ 0.68
HOXD4-201ENST00000306324 RHOXF1Q8NHV9 184 aa19.28■□□□□ 0.68
HOXD4-201ENST00000306324 THEM6Q8WUY1 208 aa19.28■□□□□ 0.68
HOXD4-201ENST00000306324 DHRS9Q9BPW9 319 aa19.28■□□□□ 0.68
HOXD4-201ENST00000306324 ABHD6Q9BV23 337 aa19.28■□□□□ 0.68
HOXD4-201ENST00000306324 CLN6Q9NWW5 311 aa19.28■□□□□ 0.68
HOXD4-201ENST00000306324 HAO2Q9NYQ3 351 aa19.28■□□□□ 0.68
HOXD4-201ENST00000306324 LAMP5Q9UJQ1 280 aa19.28■□□□□ 0.68
HOXD4-201ENST00000306324 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP19.28■□□□□ 0.68
HOXD4-201ENST00000306324 NOTCH2Q04721 2471 aa19.28■□□□□ 0.68
HOXD4-201ENST00000306324 H0YAE9 185 aa19.28■□□□□ 0.68
HOXD4-201ENST00000306324 GPRIN2O60269 458 aa19.28■□□□□ 0.68
HOXD4-201ENST00000306324 ABHD16AO95870 558 aa19.28■□□□□ 0.68
HOXD4-201ENST00000306324 LYNP07948 512 aa19.28■□□□□ 0.68
HOXD4-201ENST00000306324 PCSK6P29122 969 aa19.28■□□□□ 0.68
HOXD4-201ENST00000306324 THBS4P35443 961 aa19.28■□□□□ 0.68
HOXD4-201ENST00000306324 ATP6V1E1P36543 226 aa19.28■□□□□ 0.68
HOXD4-201ENST00000306324 WNT5AP41221 380 aa19.28■□□□□ 0.68
HOXD4-201ENST00000306324 RAD52P43351 418 aa19.28■□□□□ 0.68
HOXD4-201ENST00000306324 UCP2P55851 309 aa19.28■□□□□ 0.68
HOXD4-201ENST00000306324 ECH1Q13011 328 aa19.28■□□□□ 0.68
HOXD4-201ENST00000306324 TAF13Q15543 124 aa19.28■□□□□ 0.68
HOXD4-201ENST00000306324 C20orf204Q6ZNR8 217 aa19.28■□□□□ 0.68
HOXD4-201ENST00000306324 ZNF101Q8IZC7 436 aa19.28■□□□□ 0.68
HOXD4-201ENST00000306324 ZNF454Q8N9F8 522 aa19.28■□□□□ 0.68
HOXD4-201ENST00000306324 SETD9Q8NE22 299 aa19.28■□□□□ 0.68
HOXD4-201ENST00000306324 C4orf45Q96LM5 186 aa19.28■□□□□ 0.68
HOXD4-201ENST00000306324 AMELYQ99218 206 aa19.28■□□□□ 0.68
HOXD4-201ENST00000306324 COPS4Q9BT78 406 aa19.28■□□□□ 0.68
HOXD4-201ENST00000306324 YIPF3Q9GZM5 350 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms