RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 DNAAF1Q8NEP3 725 aa17.22■□□□□ 0.35
HOXC4-201ENST00000303406 OR13C3Q8NGS6 347 aa17.22■□□□□ 0.35
HOXC4-201ENST00000303406 OR6F1Q8NGZ6 308 aa17.22■□□□□ 0.35
HOXC4-201ENST00000303406 OR14L1PQ8NHC6 308 aa17.22■□□□□ 0.35
HOXC4-201ENST00000303406 PPP1R14AQ96A00 147 aa17.22■□□□□ 0.35
HOXC4-201ENST00000303406 ZFP3Q96NJ6 502 aa17.22■□□□□ 0.35
HOXC4-201ENST00000303406 STMN3Q9NZ72 180 aa17.22■□□□□ 0.35
HOXC4-201ENST00000303406 MRPS7Q9Y2R9 242 aaKnown RBP17.22■□□□□ 0.35
HOXC4-201ENST00000303406 POLR1DQ9Y2S0 133 aa17.22■□□□□ 0.35
HOXC4-201ENST00000303406 RBMX2Q9Y388 322 aaKnown RBP17.22■□□□□ 0.35
HOXC4-201ENST00000303406 VCANP13611 3396 aa17.22■□□□□ 0.35
HOXC4-201ENST00000303406 LOC101059948A0A1B0GTJ6 334 aa17.21■□□□□ 0.35
HOXC4-201ENST00000303406 STMND1H3BQB6 276 aa17.21■□□□□ 0.35
HOXC4-201ENST00000303406 ADRB1P08588 477 aa17.21■□□□□ 0.35
HOXC4-201ENST00000303406 PTH2RP49190 550 aa17.21■□□□□ 0.35
HOXC4-201ENST00000303406 MFAP5Q13361 173 aa17.21■□□□□ 0.35
HOXC4-201ENST00000303406 KLF9Q13886 244 aaPredicted RBP17.21■□□□□ 0.35
HOXC4-201ENST00000303406 CSRP2Q16527 193 aa17.21■□□□□ 0.35
HOXC4-201ENST00000303406 CFAP77Q6ZQR2 320 aa17.21■□□□□ 0.35
HOXC4-201ENST00000303406 DNM1P46Q6ZS02 220 aa17.21■□□□□ 0.35
HOXC4-201ENST00000303406 GGNQ86UU5 652 aa17.21■□□□□ 0.35
HOXC4-201ENST00000303406 UBE2J2Q8N2K1 259 aa17.21■□□□□ 0.35
HOXC4-201ENST00000303406 FOXRED1Q96CU9 486 aaPredicted RBP17.21■□□□□ 0.35
HOXC4-201ENST00000303406 ADGRG7Q96K78 797 aa17.21■□□□□ 0.35
HOXC4-201ENST00000303406 PBOV1Q9GZY1 135 aa17.21■□□□□ 0.35
HOXC4-201ENST00000303406 DPAGT1Q9H3H5 408 aa17.21■□□□□ 0.35
HOXC4-201ENST00000303406 EMC7Q9NPA0 242 aa17.21■□□□□ 0.35
HOXC4-201ENST00000303406 RCE1Q9Y256 329 aa17.21■□□□□ 0.35
HOXC4-201ENST00000303406 KIAA1549Q9HCM3 1950 aa17.21■□□□□ 0.35
HOXC4-201ENST00000303406 A0A0B4J293 547 aa17.21■□□□□ 0.34
HOXC4-201ENST00000303406 LOC390937A0A1W2PQ73 354 aa17.21■□□□□ 0.34
HOXC4-201ENST00000303406 TNFSF11O14788 317 aa17.21■□□□□ 0.34
HOXC4-201ENST00000303406 LRP3O75074 770 aa17.21■□□□□ 0.34
HOXC4-201ENST00000303406 TTRP02766 147 aa17.21■□□□□ 0.34
HOXC4-201ENST00000303406 CD3GP09693 182 aa17.21■□□□□ 0.34
HOXC4-201ENST00000303406 ACSM4P0C7M7 580 aa17.21■□□□□ 0.34
HOXC4-201ENST00000303406 ENPP1P22413 925 aa17.21■□□□□ 0.34
HOXC4-201ENST00000303406 CTSSP25774 331 aa17.21■□□□□ 0.34
HOXC4-201ENST00000303406 CD82P27701 267 aa17.21■□□□□ 0.34
HOXC4-201ENST00000303406 BTCP35070 178 aa17.21■□□□□ 0.34
HOXC4-201ENST00000303406 AP3S2P59780 193 aa17.21■□□□□ 0.34
HOXC4-201ENST00000303406 GRB2P62993 217 aaKnown RBP17.21■□□□□ 0.34
HOXC4-201ENST00000303406 OC90Q02509 493 aaPredicted RBP17.21■□□□□ 0.34
HOXC4-201ENST00000303406 AIMP2Q13155 320 aaKnown RBP17.21■□□□□ 0.34
HOXC4-201ENST00000303406 TRIP6Q15654 476 aaKnown RBP17.21■□□□□ 0.34
HOXC4-201ENST00000303406 TMEM69Q5SWH9 247 aa17.21■□□□□ 0.34
HOXC4-201ENST00000303406 ABHD17BQ5VST6 288 aa17.21■□□□□ 0.34
HOXC4-201ENST00000303406 CDH24Q86UP0 819 aa17.21■□□□□ 0.34
HOXC4-201ENST00000303406 ZBTB8BQ8NAP8 495 aaPredicted RBP17.21■□□□□ 0.34
HOXC4-201ENST00000303406 OR6M1Q8NGM8 313 aa17.21■□□□□ 0.34
HOXC4-201ENST00000303406 OR6N1Q8NGY5 312 aa17.21■□□□□ 0.34
HOXC4-201ENST00000303406 DEDD2Q8WXF8 326 aa17.21■□□□□ 0.34
HOXC4-201ENST00000303406 SLC7A6Q92536 515 aa17.21■□□□□ 0.34
HOXC4-201ENST00000303406 UPRTQ96BW1 309 aa17.21■□□□□ 0.34
HOXC4-201ENST00000303406 SFXN2Q96NB2 322 aa17.21■□□□□ 0.34
HOXC4-201ENST00000303406 FAM173AQ9BQD7 235 aa17.21■□□□□ 0.34
HOXC4-201ENST00000303406 NELFAQ9H3P2 528 aa17.21■□□□□ 0.34
HOXC4-201ENST00000303406 PNRC2Q9NPJ4 139 aaKnown RBP17.21■□□□□ 0.34
HOXC4-201ENST00000303406 DEPPQ9NTK1 212 aa17.21■□□□□ 0.34
HOXC4-201ENST00000303406 TAS2R4Q9NYW5 299 aa17.21■□□□□ 0.34
HOXC4-201ENST00000303406 LRFN1Q9P244 771 aa17.21■□□□□ 0.34
HOXC4-201ENST00000303406 FOXD3Q9UJU5 478 aaPredicted RBP17.21■□□□□ 0.34
HOXC4-201ENST00000303406 ZNF221Q9UK13 617 aa17.21■□□□□ 0.34
HOXC4-201ENST00000303406 NUBP2Q9Y5Y2 271 aa17.21■□□□□ 0.34
HOXC4-201ENST00000303406 LOC100289279A0A1B0GTE1 492 aa17.2■□□□□ 0.34
HOXC4-201ENST00000303406 NAP1L6A6NFF2 107 aa17.2■□□□□ 0.34
HOXC4-201ENST00000303406 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.2■□□□□ 0.34
HOXC4-201ENST00000303406 INMT-MINDY4F8WBC2 141 aa17.2■□□□□ 0.34
HOXC4-201ENST00000303406 ACOT7O00154 380 aa17.2■□□□□ 0.34
HOXC4-201ENST00000303406 SMAD9O15198 467 aaKnown RBP17.2■□□□□ 0.34
HOXC4-201ENST00000303406 XRCC3O43542 346 aa17.2■□□□□ 0.34
HOXC4-201ENST00000303406 KRT33AO76009 404 aa17.2■□□□□ 0.34
HOXC4-201ENST00000303406 TNFSF15O95150 251 aa17.2■□□□□ 0.34
HOXC4-201ENST00000303406 MSR1P21757 451 aa17.2■□□□□ 0.34
HOXC4-201ENST00000303406 GUCA1AP43080 201 aaPredicted RBP17.2■□□□□ 0.34
HOXC4-201ENST00000303406 SPEM2Q0P670 501 aa17.2■□□□□ 0.34
HOXC4-201ENST00000303406 FOXO1Q12778 655 aa17.2■□□□□ 0.34
HOXC4-201ENST00000303406 TATDN3Q17R31 274 aa17.2■□□□□ 0.34
HOXC4-201ENST00000303406 DCAF10Q5QP82 559 aa17.2■□□□□ 0.34
HOXC4-201ENST00000303406 ANKRD16Q6P6B7 361 aa17.2■□□□□ 0.34
HOXC4-201ENST00000303406 LINGO2Q7L985 606 aa17.2■□□□□ 0.34
HOXC4-201ENST00000303406 YRDCQ86U90 279 aaKnown RBP17.2■□□□□ 0.34
HOXC4-201ENST00000303406 SIAH3Q8IW03 269 aa17.2■□□□□ 0.34
HOXC4-201ENST00000303406 C20orf196Q8IYI0 205 aa17.2■□□□□ 0.34
HOXC4-201ENST00000303406 ZIC4Q8N9L1 334 aa17.2■□□□□ 0.34
HOXC4-201ENST00000303406 OR2V1Q8NHB1 315 aa17.2■□□□□ 0.34
HOXC4-201ENST00000303406 ZNF385AQ96PM9 386 aaKnown RBP17.2■□□□□ 0.34
HOXC4-201ENST00000303406 SRXN1Q9BYN0 137 aa17.2■□□□□ 0.34
HOXC4-201ENST00000303406 DDX28Q9NUL7 540 aaKnown RBP17.2■□□□□ 0.34
HOXC4-201ENST00000303406 H0YC42 278 aa17.19■□□□□ 0.34
HOXC4-201ENST00000303406 EIF1AYO14602 144 aaKnown RBP17.19■□□□□ 0.34
HOXC4-201ENST00000303406 DHHO43323 396 aa17.19■□□□□ 0.34
HOXC4-201ENST00000303406 GLSO94925 669 aaPredicted RBP17.19■□□□□ 0.34
HOXC4-201ENST00000303406 ITGA5P08648 1049 aa17.19■□□□□ 0.34
HOXC4-201ENST00000303406 CDK2P24941 298 aa17.19■□□□□ 0.34
HOXC4-201ENST00000303406 HSD11B1P28845 292 aa17.19■□□□□ 0.34
HOXC4-201ENST00000303406 CDAP32320 146 aa17.19■□□□□ 0.34
HOXC4-201ENST00000303406 GDNFP39905 211 aa17.19■□□□□ 0.34
HOXC4-201ENST00000303406 CD96P40200 585 aa17.19■□□□□ 0.34
HOXC4-201ENST00000303406 RAG2P55895 527 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms