RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 NAAAQ02083 359 aa7.07□□□□□ -1.28
SCN9A-201ENST00000303354 KEAP1Q14145 624 aa7.07□□□□□ -1.28
SCN9A-201ENST00000303354 MOB3AQ96BX8 217 aa7.07□□□□□ -1.28
SCN9A-201ENST00000303354 POFUT1Q9H488 388 aa7.07□□□□□ -1.28
SCN9A-201ENST00000303354 SLC39A9Q9NUM3 307 aa7.07□□□□□ -1.28
SCN9A-201ENST00000303354 IL37Q9NZH6 218 aa7.07□□□□□ -1.28
SCN9A-201ENST00000303354 WNT16Q9UBV4 365 aa7.07□□□□□ -1.28
SCN9A-201ENST00000303354 M0R135 149 aa7.07□□□□□ -1.28
SCN9A-201ENST00000303354 ARPC3O15145 178 aa7.07□□□□□ -1.28
SCN9A-201ENST00000303354 TXNDC12O95881 172 aa7.07□□□□□ -1.28
SCN9A-201ENST00000303354 NRASP01111 189 aa7.07□□□□□ -1.28
SCN9A-201ENST00000303354 APEX1P27695 318 aaKnown RBP7.07□□□□□ -1.28
SCN9A-201ENST00000303354 CHATP28329 748 aa7.07□□□□□ -1.28
SCN9A-201ENST00000303354 HIST2H3PS2Q5TEC6 136 aa7.07□□□□□ -1.28
SCN9A-201ENST00000303354 RPL7L1Q6DKI1 246 aaKnown RBP7.07□□□□□ -1.28
SCN9A-201ENST00000303354 ANKRD37Q7Z713 158 aa7.07□□□□□ -1.28
SCN9A-201ENST00000303354 GABRG1Q8N1C3 465 aa7.07□□□□□ -1.28
SCN9A-201ENST00000303354 OR2AE1Q8NHA4 323 aa7.07□□□□□ -1.28
SCN9A-201ENST00000303354 ZNF799Q96GE5 643 aa7.07□□□□□ -1.28
SCN9A-201ENST00000303354 CPNE5Q9HCH3 593 aa7.07□□□□□ -1.28
SCN9A-201ENST00000303354 KCNJ16Q9NPI9 418 aa7.07□□□□□ -1.28
SCN9A-201ENST00000303354 PENKP01210 267 aaPredicted RBP7.07□□□□□ -1.28
SCN9A-201ENST00000303354 TGIF1Q15583 401 aa7.07□□□□□ -1.28
SCN9A-201ENST00000303354 TMEM182Q6ZP80 229 aaPredicted RBP7.07□□□□□ -1.28
SCN9A-201ENST00000303354 NLRP8Q86W28 1048 aa7.07□□□□□ -1.28
SCN9A-201ENST00000303354 WNT1P04628 370 aa7.07□□□□□ -1.28
SCN9A-201ENST00000303354 OR13C7P0DN81 318 aa7.07□□□□□ -1.28
SCN9A-201ENST00000303354 CD22P20273 847 aa7.07□□□□□ -1.28
SCN9A-201ENST00000303354 TNFSF8P32971 234 aa7.07□□□□□ -1.28
SCN9A-201ENST00000303354 MRPL58Q14197 206 aaKnown RBP7.07□□□□□ -1.28
SCN9A-201ENST00000303354 RHOUQ7L0Q8 258 aa7.07□□□□□ -1.28
SCN9A-201ENST00000303354 MDGA2Q7Z553 956 aa7.07□□□□□ -1.28
SCN9A-201ENST00000303354 KMT5CQ86Y97 462 aa7.07□□□□□ -1.28
SCN9A-201ENST00000303354 UPRTQ96BW1 309 aa7.07□□□□□ -1.28
SCN9A-201ENST00000303354 PRDM4Q9UKN5 801 aa7.07□□□□□ -1.28
SCN9A-201ENST00000303354 MYH11P35749 1972 aa7.07□□□□□ -1.28
SCN9A-201ENST00000303354 CDX4O14627 284 aaPredicted RBP7.07□□□□□ -1.28
SCN9A-201ENST00000303354 FAHD2BQ6P2I3 314 aaPredicted RBP7.07□□□□□ -1.28
SCN9A-201ENST00000303354 ANKRD53Q8N9V6 530 aa7.07□□□□□ -1.28
SCN9A-201ENST00000303354 FAHD2AQ96GK7 314 aa7.07□□□□□ -1.28
SCN9A-201ENST00000303354 ADAT1Q9BUB4 502 aaKnown RBP7.07□□□□□ -1.28
SCN9A-201ENST00000303354 NECAP2Q9NVZ3 263 aa7.07□□□□□ -1.28
SCN9A-201ENST00000303354 ZNF835Q9Y2P0 537 aa7.07□□□□□ -1.28
SCN9A-201ENST00000303354 C9orf172C9J069 976 aa7.07□□□□□ -1.28
SCN9A-201ENST00000303354 TNFRSF10CO14798 259 aa7.07□□□□□ -1.28
SCN9A-201ENST00000303354 RBP2P50120 134 aa7.07□□□□□ -1.28
SCN9A-201ENST00000303354 GAMTQ14353 236 aa7.07□□□□□ -1.28
SCN9A-201ENST00000303354 SEC22CQ9BRL7 303 aa7.07□□□□□ -1.28
SCN9A-201ENST00000303354 SLC25A31Q9H0C2 315 aa7.07□□□□□ -1.28
SCN9A-201ENST00000303354 OR5H15A6NDH6 313 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 OR5H14A6NHG9 310 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 OR5H1A6NKK0 313 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 HMGB3O15347 200 aaKnown RBP7.06□□□□□ -1.28
SCN9A-201ENST00000303354 CRYABP02511 175 aaKnown RBP7.06□□□□□ -1.28
SCN9A-201ENST00000303354 TGFBR1P36897 503 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 ZNF121P58317 390 aaPredicted RBP7.06□□□□□ -1.28
SCN9A-201ENST00000303354 TAS2R19P59542 299 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 PROX2Q3B8N5 592 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 PDLIM5Q96HC4 596 aaKnown RBP7.06□□□□□ -1.28
SCN9A-201ENST00000303354 GPR55Q9Y2T6 319 aaPredicted RBP7.06□□□□□ -1.28
SCN9A-201ENST00000303354 MYH10P35580 1976 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 IGHV3-21A0A0B4J1V1 117 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 GAPDHSO14556 408 aaPredicted RBP7.06□□□□□ -1.28
SCN9A-201ENST00000303354 ITGAMP11215 1152 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 DTYMKP23919 212 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 AVPR2P30518 371 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 ARR3P36575 388 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 ZFP82Q8N141 532 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 CLDN22Q8N7P3 220 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 TP53I13Q8NBR0 393 aaPredicted RBP7.06□□□□□ -1.28
SCN9A-201ENST00000303354 ZNF2Q9BSG1 426 aaPredicted RBP7.06□□□□□ -1.28
SCN9A-201ENST00000303354 SMCO4Q9NRQ5 59 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 PLEKHB1Q9UF11 243 aaPredicted RBP7.06□□□□□ -1.28
SCN9A-201ENST00000303354 C4AP0C0L4 1744 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 TMEM212A6NML5 194 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 MPZL1O95297 269 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 OR56B1Q8NGI3 324 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 ST8SIA2Q92186 375 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 KTI12Q96EK9 354 aaPredicted RBP7.06□□□□□ -1.28
SCN9A-201ENST00000303354 UHRF2Q96PU4 802 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 TARM1B6A8C7 271 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 HSBP1L1C9JCN9 74 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 C17orf112F2Z3M2 114 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 UPK1AO00322 258 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 ABCD3P28288 659 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 SLC25A26Q70HW3 274 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 ZNF546Q86UE3 836 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 SLC22A24Q8N4F4 322 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 MORN4Q8NDC4 146 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 PRRT1Q99946 306 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 CENPOQ9BU64 300 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 SLC17A4Q9Y2C5 497 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 MEIOCA2RUB1 952 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 DNASE2O00115 360 aaPredicted RBP7.06□□□□□ -1.28
SCN9A-201ENST00000303354 AIPO00170 330 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 GLCEO94923 617 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 CXCL10P02778 98 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 CD14P08571 375 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 ZNF74Q16587 644 aa7.06□□□□□ -1.28
SCN9A-201ENST00000303354 HSD17B11Q8NBQ5 300 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms