RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 NPR2P20594 1047 aa13.24□□□□□ -0.29
CCDC140-201ENST00000295226 IL32P24001 234 aa13.24□□□□□ -0.29
CCDC140-201ENST00000295226 CCKARP32238 428 aa13.24□□□□□ -0.29
CCDC140-201ENST00000295226 CD79BP40259 229 aa13.24□□□□□ -0.29
CCDC140-201ENST00000295226 ASCL1P50553 236 aa13.24□□□□□ -0.29
CCDC140-201ENST00000295226 NCS1P62166 190 aa13.24□□□□□ -0.29
CCDC140-201ENST00000295226 TGFBR3Q03167 851 aa13.24□□□□□ -0.29
CCDC140-201ENST00000295226 RAB40BQ12829 278 aa13.24□□□□□ -0.29
CCDC140-201ENST00000295226 GGTLC2Q14390 218 aa13.24□□□□□ -0.29
CCDC140-201ENST00000295226 MED22Q15528 200 aa13.24□□□□□ -0.29
CCDC140-201ENST00000295226 KCNMB1Q16558 191 aa13.24□□□□□ -0.29
CCDC140-201ENST00000295226 FAM27BQ5VT28 67 aa13.24□□□□□ -0.29
CCDC140-201ENST00000295226 SPATC1Q76KD6 591 aa13.24□□□□□ -0.29
CCDC140-201ENST00000295226 SLC16A14Q7RTX9 510 aa13.24□□□□□ -0.29
CCDC140-201ENST00000295226 OR10H4Q8NGA5 316 aa13.24□□□□□ -0.29
CCDC140-201ENST00000295226 OR52N5Q8NH56 324 aa13.24□□□□□ -0.29
CCDC140-201ENST00000295226 S100PBPQ96BU1 408 aa13.24□□□□□ -0.29
CCDC140-201ENST00000295226 AMELYQ99218 206 aa13.24□□□□□ -0.29
CCDC140-201ENST00000295226 C1QTNF6Q9BXI9 259 aa13.24□□□□□ -0.29
CCDC140-201ENST00000295226 MARCH7Q9H992 704 aa13.24□□□□□ -0.29
CCDC140-201ENST00000295226 NOX3Q9HBY0 568 aa13.24□□□□□ -0.29
CCDC140-201ENST00000295226 KCNJ16Q9NPI9 418 aa13.24□□□□□ -0.29
CCDC140-201ENST00000295226 CHCHD3Q9NX63 227 aaKnown RBP13.24□□□□□ -0.29
CCDC140-201ENST00000295226 CCDC59Q9P031 241 aaKnown RBP13.24□□□□□ -0.29
CCDC140-201ENST00000295226 ASH2LQ9UBL3 628 aa13.24□□□□□ -0.29
CCDC140-201ENST00000295226 USP9XQ93008 2570 aaPredicted RBP13.24□□□□□ -0.29
CCDC140-201ENST00000295226 MYL12BO14950 172 aa13.24□□□□□ -0.29
CCDC140-201ENST00000295226 RER1O15258 196 aa13.24□□□□□ -0.29
CCDC140-201ENST00000295226 MAGEB4O15481 346 aaPredicted RBP13.24□□□□□ -0.29
CCDC140-201ENST00000295226 AGFG2O95081 481 aa13.24□□□□□ -0.29
CCDC140-201ENST00000295226 WNT11O96014 354 aa13.24□□□□□ -0.29
CCDC140-201ENST00000295226 GADD45AP24522 165 aa13.24□□□□□ -0.29
CCDC140-201ENST00000295226 BLVRAP53004 296 aa13.24□□□□□ -0.29
CCDC140-201ENST00000295226 LSM3P62310 102 aaKnown RBP13.24□□□□□ -0.29
CCDC140-201ENST00000295226 ZNF627Q7L945 461 aa13.24□□□□□ -0.29
CCDC140-201ENST00000295226 SLC16A9Q7RTY1 509 aa13.24□□□□□ -0.29
CCDC140-201ENST00000295226 SLC35F2Q8IXU6 374 aa13.24□□□□□ -0.29
CCDC140-201ENST00000295226 WDR31Q8NA23 367 aa13.24□□□□□ -0.29
CCDC140-201ENST00000295226 OR6Q1Q8NGQ2 317 aa13.24□□□□□ -0.29
CCDC140-201ENST00000295226 PPP1R14BQ96C90 147 aa13.24□□□□□ -0.29
CCDC140-201ENST00000295226 FGF20Q9NP95 211 aaPredicted RBP13.24□□□□□ -0.29
CCDC140-201ENST00000295226 ELOVL5Q9NYP7 299 aa13.24□□□□□ -0.29
CCDC140-201ENST00000295226 EXOGQ9Y2C4 368 aaKnown RBP13.24□□□□□ -0.29
CCDC140-201ENST00000295226 COL12A1Q99715 3063 aa13.23□□□□□ -0.29
CCDC140-201ENST00000295226 A0A1B0GVG6 124 aa13.23□□□□□ -0.29
CCDC140-201ENST00000295226 C16orf97H3BN30 126 aa13.23□□□□□ -0.29
CCDC140-201ENST00000295226 PSMD9O00233 223 aa13.23□□□□□ -0.29
CCDC140-201ENST00000295226 FARS2O95363 451 aaKnown RBP13.23□□□□□ -0.29
CCDC140-201ENST00000295226 HRGP04196 525 aa13.23□□□□□ -0.29
CCDC140-201ENST00000295226 ZNF32P17041 273 aa13.23□□□□□ -0.29
CCDC140-201ENST00000295226 MYL12AP19105 171 aa13.23□□□□□ -0.29
CCDC140-201ENST00000295226 PSMB1P20618 241 aaKnown RBP13.23□□□□□ -0.29
CCDC140-201ENST00000295226 OPRL1P41146 370 aa13.23□□□□□ -0.29
CCDC140-201ENST00000295226 MLLT11Q13015 90 aaPredicted RBP13.23□□□□□ -0.29
CCDC140-201ENST00000295226 SPHARQ15513 63 aa13.23□□□□□ -0.29
CCDC140-201ENST00000295226 XKRXQ6PP77 449 aa13.23□□□□□ -0.29
CCDC140-201ENST00000295226 CFAP77Q6ZQR2 320 aa13.23□□□□□ -0.29
CCDC140-201ENST00000295226 SSX6Q7RTT6 188 aa13.23□□□□□ -0.29
CCDC140-201ENST00000295226 DCXRQ7Z4W1 244 aa13.23□□□□□ -0.29
CCDC140-201ENST00000295226 LHFPL3Q86UP9 236 aa13.23□□□□□ -0.29
CCDC140-201ENST00000295226 NANOGP1Q8N7R0 232 aa13.23□□□□□ -0.29
CCDC140-201ENST00000295226 THEM6Q8WUY1 208 aa13.23□□□□□ -0.29
CCDC140-201ENST00000295226 ACTR6Q9GZN1 396 aa13.23□□□□□ -0.29
CCDC140-201ENST00000295226 SLIRPQ9GZT3 109 aaKnown RBP13.23□□□□□ -0.29
CCDC140-201ENST00000295226 ISYNA1Q9NPH2 558 aa13.23□□□□□ -0.29
CCDC140-201ENST00000295226 AKIP1Q9NQ31 210 aa13.23□□□□□ -0.29
CCDC140-201ENST00000295226 TBCCD1Q9NVR7 557 aa13.23□□□□□ -0.29
CCDC140-201ENST00000295226 CYB5R1Q9UHQ9 305 aa13.23□□□□□ -0.29
CCDC140-201ENST00000295226 LSM2Q9Y333 95 aaKnown RBP13.23□□□□□ -0.29
CCDC140-201ENST00000295226 EXOSC1Q9Y3B2 195 aaKnown RBP13.23□□□□□ -0.29
CCDC140-201ENST00000295226 A0A1W2PQL4 384 aaPredicted RBP13.22□□□□□ -0.29
CCDC140-201ENST00000295226 C12orf71A8MTZ7 269 aa13.22□□□□□ -0.29
CCDC140-201ENST00000295226 PRR32B1ATL7 298 aa13.22□□□□□ -0.29
CCDC140-201ENST00000295226 J3QRE1 110 aa13.22□□□□□ -0.29
CCDC140-201ENST00000295226 CLDN14O95500 239 aa13.22□□□□□ -0.29
CCDC140-201ENST00000295226 CST2P09228 141 aa13.22□□□□□ -0.29
CCDC140-201ENST00000295226 HSMCR30P0CW71 290 aa13.22□□□□□ -0.29
CCDC140-201ENST00000295226 SOX6P35712 828 aa13.22□□□□□ -0.29
CCDC140-201ENST00000295226 LSM6P62312 80 aaKnown RBP13.22□□□□□ -0.29
CCDC140-201ENST00000295226 TMED1Q13445 227 aa13.22□□□□□ -0.29
CCDC140-201ENST00000295226 EIF2B1Q14232 305 aaKnown RBP13.22□□□□□ -0.29
CCDC140-201ENST00000295226 ZNF404Q494X3 552 aa13.22□□□□□ -0.29
CCDC140-201ENST00000295226 SLC18B1Q6NT16 456 aa13.22□□□□□ -0.29
CCDC140-201ENST00000295226 CDC20BQ86Y33 519 aa13.22□□□□□ -0.29
CCDC140-201ENST00000295226 ZNF808Q8N4W9 903 aaPredicted RBP13.22□□□□□ -0.29
CCDC140-201ENST00000295226 AKR7LQ8NHP1 331 aa13.22□□□□□ -0.29
CCDC140-201ENST00000295226 MCFD2Q8NI22 146 aa13.22□□□□□ -0.29
CCDC140-201ENST00000295226 RPL3LQ92901 407 aaKnown RBP13.22□□□□□ -0.29
CCDC140-201ENST00000295226 MAP6Q96JE9 813 aa13.22□□□□□ -0.29
CCDC140-201ENST00000295226 OCEL1Q9H607 264 aa13.22□□□□□ -0.29
CCDC140-201ENST00000295226 RNF121Q9H920 327 aa13.22□□□□□ -0.29
CCDC140-201ENST00000295226 SLC17A5Q9NRA2 495 aa13.22□□□□□ -0.29
CCDC140-201ENST00000295226 CLEC2DQ9UHP7 191 aa13.22□□□□□ -0.29
CCDC140-201ENST00000295226 GDF2Q9UK05 429 aaPredicted RBP13.22□□□□□ -0.29
CCDC140-201ENST00000295226 TMEM129A0AVI4 362 aa13.21□□□□□ -0.29
CCDC140-201ENST00000295226 J3QKU1 62 aa13.21□□□□□ -0.29
CCDC140-201ENST00000295226 MMP7P09237 267 aaPredicted RBP13.21□□□□□ -0.29
CCDC140-201ENST00000295226 PSMA1P25786 263 aaKnown RBP13.21□□□□□ -0.29
CCDC140-201ENST00000295226 UBE2NP61088 152 aaKnown RBP13.21□□□□□ -0.29
CCDC140-201ENST00000295226 TFF3Q07654 80 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms