RNA–Protein interactions for RNA: ENST00000293845.7

CCDC42-201, Transcript of coiled-coil domain containing 42, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC42, Length 1,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-201ENST00000293845 Q96MT0 163 aa11.47□□□□□ -0.57
CCDC42-201ENST00000293845 COQ7Q99807 217 aa11.47□□□□□ -0.57
CCDC42-201ENST00000293845 CLEC4MQ9H2X3 399 aaPredicted RBP11.47□□□□□ -0.57
CCDC42-201ENST00000293845 ADGRL4Q9HBW9 690 aa11.47□□□□□ -0.57
CCDC42-201ENST00000293845 HRNRQ86YZ3 2850 aaPredicted RBP11.47□□□□□ -0.57
CCDC42-201ENST00000293845 ASH1LQ9NR48 2969 aaKnown RBP11.47□□□□□ -0.57
CCDC42-201ENST00000293845 DCHS2Q6V1P9 2916 aa11.47□□□□□ -0.57
CCDC42-201ENST00000293845 DSCAMO60469 2012 aa11.47□□□□□ -0.57
CCDC42-201ENST00000293845 CENPEQ02224 2701 aa11.46□□□□□ -0.57
CCDC42-201ENST00000293845 LOC100509620A0A075B734 347 aa11.46□□□□□ -0.57
CCDC42-201ENST00000293845 SNTNA6NMZ2 147 aa11.46□□□□□ -0.57
CCDC42-201ENST00000293845 ATP6V1G2-DDX39BF2Z307 99 aa11.46□□□□□ -0.57
CCDC42-201ENST00000293845 ICMTO60725 284 aa11.46□□□□□ -0.57
CCDC42-201ENST00000293845 WBP4O75554 376 aaKnown RBP11.46□□□□□ -0.57
CCDC42-201ENST00000293845 PLAUP00749 431 aa11.46□□□□□ -0.57
CCDC42-201ENST00000293845 GNAO1P09471 354 aa11.46□□□□□ -0.57
CCDC42-201ENST00000293845 SBK2P0C263 348 aa11.46□□□□□ -0.57
CCDC42-201ENST00000293845 STOMP27105 288 aa11.46□□□□□ -0.57
CCDC42-201ENST00000293845 APLNRP35414 380 aa11.46□□□□□ -0.57
CCDC42-201ENST00000293845 NAA10P41227 235 aaPredicted RBP11.46□□□□□ -0.57
CCDC42-201ENST00000293845 POU4F2Q12837 409 aa11.46□□□□□ -0.57
CCDC42-201ENST00000293845 RHOUQ7L0Q8 258 aa11.46□□□□□ -0.57
CCDC42-201ENST00000293845 DCXRQ7Z4W1 244 aa11.46□□□□□ -0.57
CCDC42-201ENST00000293845 CDC20BQ86Y33 519 aa11.46□□□□□ -0.57
CCDC42-201ENST00000293845 C8orf59Q8N0T1 100 aaPredicted RBP11.46□□□□□ -0.57
CCDC42-201ENST00000293845 PIAS4Q8N2W9 510 aaPredicted RBP11.46□□□□□ -0.57
CCDC42-201ENST00000293845 KBTBD8Q8NFY9 601 aa11.46□□□□□ -0.57
CCDC42-201ENST00000293845 OR10S1Q8NGN2 331 aa11.46□□□□□ -0.57
CCDC42-201ENST00000293845 OR1F12Q8NHA8 337 aa11.46□□□□□ -0.57
CCDC42-201ENST00000293845 FBLIM1Q8WUP2 373 aa11.46□□□□□ -0.57
CCDC42-201ENST00000293845 CNN2Q99439 309 aaKnown RBP11.46□□□□□ -0.57
CCDC42-201ENST00000293845 MNTQ99583 582 aa11.46□□□□□ -0.57
CCDC42-201ENST00000293845 KCNS3Q9BQ31 491 aa11.46□□□□□ -0.57
CCDC42-201ENST00000293845 YIPF3Q9GZM5 350 aa11.46□□□□□ -0.57
CCDC42-201ENST00000293845 DDX28Q9NUL7 540 aaKnown RBP11.46□□□□□ -0.57
CCDC42-201ENST00000293845 CLN6Q9NWW5 311 aa11.46□□□□□ -0.57
CCDC42-201ENST00000293845 AASSQ9UDR5 926 aa11.46□□□□□ -0.57
CCDC42-201ENST00000293845 ALOX5APP20292 161 aa11.45□□□□□ -0.58
CCDC42-201ENST00000293845 HTR5AP47898 357 aa11.45□□□□□ -0.58
CCDC42-201ENST00000293845 MTNR1AP48039 350 aa11.45□□□□□ -0.58
CCDC42-201ENST00000293845 GDI2P50395 445 aaKnown RBP11.45□□□□□ -0.58
CCDC42-201ENST00000293845 ECH1Q13011 328 aa11.45□□□□□ -0.58
CCDC42-201ENST00000293845 SNCBQ16143 134 aa11.45□□□□□ -0.58
CCDC42-201ENST00000293845 KRTAP27-1Q3LI81 207 aa11.45□□□□□ -0.58
CCDC42-201ENST00000293845 C6orf52Q5T4I8 152 aa11.45□□□□□ -0.58
CCDC42-201ENST00000293845 SLC22A25Q6T423 547 aa11.45□□□□□ -0.58
CCDC42-201ENST00000293845 TMEM200AQ86VY9 491 aa11.45□□□□□ -0.58
CCDC42-201ENST00000293845 NUP37Q8NFH4 326 aa11.45□□□□□ -0.58
CCDC42-201ENST00000293845 OR4F15Q8NGB8 312 aa11.45□□□□□ -0.58
CCDC42-201ENST00000293845 LILRB1Q8NHL6 650 aaPredicted RBP11.45□□□□□ -0.58
CCDC42-201ENST00000293845 IPCEF1Q8WWN9 437 aaPredicted RBP11.45□□□□□ -0.58
CCDC42-201ENST00000293845 DCLRE1CQ96SD1 692 aaKnown RBP11.45□□□□□ -0.58
CCDC42-201ENST00000293845 ATF6BQ99941 703 aa11.45□□□□□ -0.58
CCDC42-201ENST00000293845 ABHD6Q9BV23 337 aa11.45□□□□□ -0.58
CCDC42-201ENST00000293845 CDH20Q9HBT6 801 aa11.45□□□□□ -0.58
CCDC42-201ENST00000293845 TMEM14AQ9Y6G1 99 aa11.45□□□□□ -0.58
CCDC42-201ENST00000293845 FLNBO75369 2602 aaKnown RBP11.45□□□□□ -0.58
CCDC42-201ENST00000293845 CELSR2Q9HCU4 2923 aa11.45□□□□□ -0.58
CCDC42-201ENST00000293845 ABCA12Q86UK0 2595 aa11.45□□□□□ -0.58
CCDC42-201ENST00000293845 ZNF878C9JN71 531 aa11.44□□□□□ -0.58
CCDC42-201ENST00000293845 LYNP07948 512 aa11.44□□□□□ -0.58
CCDC42-201ENST00000293845 MRPL3P09001 348 aaKnown RBP11.44□□□□□ -0.58
CCDC42-201ENST00000293845 CCL2P13500 99 aa11.44□□□□□ -0.58
CCDC42-201ENST00000293845 PRF1P14222 555 aa11.44□□□□□ -0.58
CCDC42-201ENST00000293845 PCSK6P29122 969 aa11.44□□□□□ -0.58
CCDC42-201ENST00000293845 OTX1P32242 354 aaPredicted RBP11.44□□□□□ -0.58
CCDC42-201ENST00000293845 NKX6-1P78426 367 aaPredicted RBP11.44□□□□□ -0.58
CCDC42-201ENST00000293845 HGFACQ04756 655 aa11.44□□□□□ -0.58
CCDC42-201ENST00000293845 ZNF91Q05481 1191 aa11.44□□□□□ -0.58
CCDC42-201ENST00000293845 EIF2B1Q14232 305 aaKnown RBP11.44□□□□□ -0.58
CCDC42-201ENST00000293845 ZNF672Q499Z4 452 aaPredicted RBP11.44□□□□□ -0.58
CCDC42-201ENST00000293845 THAP5Q7Z6K1 395 aa11.44□□□□□ -0.58
CCDC42-201ENST00000293845 PAQR4Q8N4S7 273 aaPredicted RBP11.44□□□□□ -0.58
CCDC42-201ENST00000293845 OR51G2Q8NGK0 314 aa11.44□□□□□ -0.58
CCDC42-201ENST00000293845 CNIH3Q8TBE1 160 aa11.44□□□□□ -0.58
CCDC42-201ENST00000293845 RNF133Q8WVZ7 376 aa11.44□□□□□ -0.58
CCDC42-201ENST00000293845 SLAMF6Q96DU3 332 aa11.44□□□□□ -0.58
CCDC42-201ENST00000293845 AMELYQ99218 206 aa11.44□□□□□ -0.58
CCDC42-201ENST00000293845 ANKRD60Q9BZ19 345 aa11.44□□□□□ -0.58
CCDC42-201ENST00000293845 PLEKHF2Q9H8W4 249 aa11.44□□□□□ -0.58
CCDC42-201ENST00000293845 SPG11Q96JI7 2443 aa11.44□□□□□ -0.58
CCDC42-201ENST00000293845 C5orf49A4QMS7 147 aa11.43□□□□□ -0.58
CCDC42-201ENST00000293845 J3QW42 95 aa11.43□□□□□ -0.58
CCDC42-201ENST00000293845 PHYHO14832 338 aa11.43□□□□□ -0.58
CCDC42-201ENST00000293845 DBTP11182 482 aaKnown RBP11.43□□□□□ -0.58
CCDC42-201ENST00000293845 NR4A1P22736 598 aa11.43□□□□□ -0.58
CCDC42-201ENST00000293845 NUDT6P53370 316 aa11.43□□□□□ -0.58
CCDC42-201ENST00000293845 GALK2Q01415 458 aa11.43□□□□□ -0.58
CCDC42-201ENST00000293845 RSPO1Q2MKA7 263 aaPredicted RBP11.43□□□□□ -0.58
CCDC42-201ENST00000293845 TMEM154Q6P9G4 183 aa11.43□□□□□ -0.58
CCDC42-201ENST00000293845 SLC35F2Q8IXU6 374 aa11.43□□□□□ -0.58
CCDC42-201ENST00000293845 SLC7A6Q92536 515 aa11.43□□□□□ -0.58
CCDC42-201ENST00000293845 AKAP1Q92667 903 aaKnown RBP eCLIP11.43□□□□□ -0.58
CCDC42-201ENST00000293845 NEUROG1Q92886 237 aa11.43□□□□□ -0.58
CCDC42-201ENST00000293845 RNFT2Q96EX2 444 aa11.43□□□□□ -0.58
CCDC42-201ENST00000293845 ZNF184Q99676 751 aaPredicted RBP11.43□□□□□ -0.58
CCDC42-201ENST00000293845 ZNF442Q9H7R0 627 aa11.43□□□□□ -0.58
CCDC42-201ENST00000293845 MRPS18AQ9NVS2 196 aaKnown RBP11.43□□□□□ -0.58
CCDC42-201ENST00000293845 LAMP5Q9UJQ1 280 aa11.43□□□□□ -0.58
CCDC42-201ENST00000293845 POU2F3Q9UKI9 436 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms