RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 MIB2Q96AX9 1013 aa14.98□□□□□ -0.01
CPSF4-201ENST00000292476 HAVCR1Q96D42 359 aa14.98□□□□□ -0.01
CPSF4-201ENST00000292476 S100A16Q96FQ6 103 aaKnown RBP14.98□□□□□ -0.01
CPSF4-201ENST00000292476 C5orf34Q96MH7 638 aa14.98□□□□□ -0.01
CPSF4-201ENST00000292476 INTS14Q96SY0 518 aa14.98□□□□□ -0.01
CPSF4-201ENST00000292476 COMMD4Q9H0A8 199 aa14.98□□□□□ -0.01
CPSF4-201ENST00000292476 ZNF346Q9UL40 294 aaKnown RBP14.98□□□□□ -0.01
CPSF4-201ENST00000292476 CLEC4AQ9UMR7 237 aa14.98□□□□□ -0.01
CPSF4-201ENST00000292476 SSUH2Q9Y2M2 353 aa14.98□□□□□ -0.01
CPSF4-201ENST00000292476 MRPS7Q9Y2R9 242 aaKnown RBP14.98□□□□□ -0.01
CPSF4-201ENST00000292476 KLF13Q9Y2Y9 288 aaPredicted RBP14.98□□□□□ -0.01
CPSF4-201ENST00000292476 HRH3Q9Y5N1 445 aa14.98□□□□□ -0.01
CPSF4-201ENST00000292476 A0A1W2PNV4 684 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 TTLL8A6PVC2 850 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 C11orf98E9PRG8 122 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 EFNA2O43921 213 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 ZIC3O60481 467 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 EIF1BO60739 113 aaKnown RBP14.97□□□□□ -0.01
CPSF4-201ENST00000292476 NEURL1O76050 574 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 WISP1O95388 367 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 SULT1A3P0DMM9 295 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 SULT1A4P0DMN0 295 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 OR8G3PP0DMU2 310 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 WT1P19544 449 aaPredicted RBP14.97□□□□□ -0.01
CPSF4-201ENST00000292476 ALOX5APP20292 161 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 GALK2Q01415 458 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 HES5Q5TA89 166 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 LINGO2Q7L985 606 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 ZNF227Q86WZ6 799 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 OR11H7Q8NGC8 314 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 OR5B2Q96R09 309 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 NPAS1Q99742 590 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 LIN7BQ9HAP6 207 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 FRRS1LQ9P0K9 344 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 KLHDC2Q9Y2U9 406 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 FKBP7Q9Y680 259 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 OR5H15A6NDH6 313 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 OR4C45A6NMZ5 311 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 G3V3Y1 287 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 FABP7O15540 132 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 PEX14O75381 377 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 SERPINI2O75830 405 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 PMS2P2O95744 297 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 WDPCPO95876 746 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 TGM6O95932 706 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 ART1P52961 327 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 UCNP55089 124 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 CSNK2A1P68400 391 aaPredicted RBP14.97□□□□□ -0.01
CPSF4-201ENST00000292476 MFAP5Q13361 173 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 TOMM20Q15388 145 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 ACKR1Q16570 336 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 TMEM176BQ3YBM2 270 aaPredicted RBP14.97□□□□□ -0.01
CPSF4-201ENST00000292476 C6orf183Q5T699 404 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 SPINK14Q6IE38 97 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 DNM1P46Q6ZS02 220 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 LRRTM1Q86UE6 522 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 OR2G2Q8NGZ5 317 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 OR14L1PQ8NHC6 308 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 FCAMRQ8WWV6 532 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 PHF21AQ96BD5 680 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 GPR137Q96N19 417 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 SLC25A18Q9H1K4 315 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 PRORYQ9H606 182 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 OR5V1Q9UGF6 321 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 RALYQ9UKM9 306 aaKnown RBP14.97□□□□□ -0.01
CPSF4-201ENST00000292476 FBXL3Q9UKT7 428 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 FOXJ3Q9UPW0 622 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 RPH3AQ9Y2J0 694 aaPredicted RBP14.97□□□□□ -0.01
CPSF4-201ENST00000292476 HSPB11Q9Y547 144 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 NPTNQ9Y639 398 aa14.97□□□□□ -0.01
CPSF4-201ENST00000292476 PCSK5Q92824 1860 aa14.96□□□□□ -0.01
CPSF4-201ENST00000292476 MEIKINA0A087WXM9 373 aa14.96□□□□□ -0.01
CPSF4-201ENST00000292476 OR2M5A3KFT3 312 aa14.96□□□□□ -0.01
CPSF4-201ENST00000292476 A6NL46 340 aa14.96□□□□□ -0.01
CPSF4-201ENST00000292476 SHISA8B8ZZ34 492 aa14.96□□□□□ -0.01
CPSF4-201ENST00000292476 NPIPA5E9PKD4 350 aa14.96□□□□□ -0.01
CPSF4-201ENST00000292476 KLRC4-KLRK1H3BQV0 150 aa14.96□□□□□ -0.01
CPSF4-201ENST00000292476 ACOT7O00154 380 aa14.96□□□□□ -0.01
CPSF4-201ENST00000292476 SULT2B1O00204 365 aa14.96□□□□□ -0.01
CPSF4-201ENST00000292476 ZNF593O00488 134 aaPredicted RBP14.96□□□□□ -0.01
CPSF4-201ENST00000292476 DNPH1O43598 174 aa14.96□□□□□ -0.01
CPSF4-201ENST00000292476 CD46P15529 392 aa14.96□□□□□ -0.01
CPSF4-201ENST00000292476 PTH2RP49190 550 aa14.96□□□□□ -0.01
CPSF4-201ENST00000292476 IKZF1Q13422 519 aa14.96□□□□□ -0.01
CPSF4-201ENST00000292476 ZNF239Q16600 458 aaKnown RBP14.96□□□□□ -0.01
CPSF4-201ENST00000292476 THOC7Q6I9Y2 204 aaKnown RBP14.96□□□□□ -0.01
CPSF4-201ENST00000292476 LINC00696Q6ZRV3 163 aa14.96□□□□□ -0.01
CPSF4-201ENST00000292476 TMPPEQ6ZT21 453 aa14.96□□□□□ -0.01
CPSF4-201ENST00000292476 ESPNLQ6ZVH7 1005 aa14.96□□□□□ -0.01
CPSF4-201ENST00000292476 FCRLAQ7L513 359 aa14.96□□□□□ -0.01
CPSF4-201ENST00000292476 OR6V1Q8N148 313 aa14.96□□□□□ -0.01
CPSF4-201ENST00000292476 FAM109AQ8N4B1 249 aa14.96□□□□□ -0.01
CPSF4-201ENST00000292476 ZNF433Q8N7K0 673 aaPredicted RBP14.96□□□□□ -0.01
CPSF4-201ENST00000292476 OR2M7Q8NG81 312 aa14.96□□□□□ -0.01
CPSF4-201ENST00000292476 GPR148Q8TDV2 347 aa14.96□□□□□ -0.01
CPSF4-201ENST00000292476 GIMAP1Q8WWP7 306 aa14.96□□□□□ -0.01
CPSF4-201ENST00000292476 HAS2Q92819 552 aa14.96□□□□□ -0.01
CPSF4-201ENST00000292476 TSSK2Q96PF2 358 aa14.96□□□□□ -0.01
CPSF4-201ENST00000292476 NAA11Q9BSU3 229 aaPredicted RBP14.96□□□□□ -0.01
CPSF4-201ENST00000292476 C20orf85Q9H1P6 137 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms