RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 OR8S1Q8NH09 359 aa9.34□□□□□ -0.91
SKA1-201ENST00000285116 SLC22A8Q8TCC7 542 aa9.34□□□□□ -0.91
SKA1-201ENST00000285116 RNF128Q8TEB7 428 aa9.34□□□□□ -0.91
SKA1-201ENST00000285116 LAT2Q9GZY6 243 aa9.34□□□□□ -0.91
SKA1-201ENST00000285116 CHRNA10Q9GZZ6 450 aa9.34□□□□□ -0.91
SKA1-201ENST00000285116 RNF122Q9H9V4 155 aa9.34□□□□□ -0.91
SKA1-201ENST00000285116 SPTBP11277 2137 aa9.33□□□□□ -0.92
SKA1-201ENST00000285116 A0A087WV48 116 aa9.33□□□□□ -0.92
SKA1-201ENST00000285116 TMEM200CA6NKL6 621 aa9.33□□□□□ -0.92
SKA1-201ENST00000285116 OR6C76A6NM76 312 aa9.33□□□□□ -0.92
SKA1-201ENST00000285116 SULT2B1O00204 365 aa9.33□□□□□ -0.92
SKA1-201ENST00000285116 IGFBP3P17936 291 aaPredicted RBP9.33□□□□□ -0.92
SKA1-201ENST00000285116 RABIFP47224 123 aa9.33□□□□□ -0.92
SKA1-201ENST00000285116 SOX2P48431 317 aa9.33□□□□□ -0.92
SKA1-201ENST00000285116 PNLIPRP2P54317 469 aa9.33□□□□□ -0.92
SKA1-201ENST00000285116 CXADRP78310 365 aa9.33□□□□□ -0.92
SKA1-201ENST00000285116 SLC17A1Q14916 467 aa9.33□□□□□ -0.92
SKA1-201ENST00000285116 TMEM205Q6UW68 189 aa9.33□□□□□ -0.92
SKA1-201ENST00000285116 RD3Q7Z3Z2 195 aa9.33□□□□□ -0.92
SKA1-201ENST00000285116 ZNF676Q8N7Q3 588 aa9.33□□□□□ -0.92
SKA1-201ENST00000285116 STOML3Q8TAV4 291 aa9.33□□□□□ -0.92
SKA1-201ENST00000285116 PPP1R1CQ8WVI7 109 aa9.33□□□□□ -0.92
SKA1-201ENST00000285116 DVL3Q92997 716 aaPredicted RBP9.33□□□□□ -0.92
SKA1-201ENST00000285116 WNT2BQ93097 391 aa9.33□□□□□ -0.92
SKA1-201ENST00000285116 TCEAL7Q9BRU2 100 aa9.33□□□□□ -0.92
SKA1-201ENST00000285116 S1PR5Q9H228 398 aa9.33□□□□□ -0.92
SKA1-201ENST00000285116 OR51M1Q9H341 326 aa9.33□□□□□ -0.92
SKA1-201ENST00000285116 TREM1Q9NP99 234 aa9.33□□□□□ -0.92
SKA1-201ENST00000285116 TMEM100Q9NV29 134 aa9.33□□□□□ -0.92
SKA1-201ENST00000285116 SLC2A8Q9NY64 477 aa9.33□□□□□ -0.92
SKA1-201ENST00000285116 VSX1Q9NZR4 365 aaPredicted RBP9.33□□□□□ -0.92
SKA1-201ENST00000285116 PLEKHA6Q9Y2H5 1048 aa9.33□□□□□ -0.92
SKA1-201ENST00000285116 ARHGEF17Q96PE2 2063 aaPredicted RBP9.33□□□□□ -0.92
SKA1-201ENST00000285116 TRBV23OR9-2A0A075B6M9 112 aa9.33□□□□□ -0.92
SKA1-201ENST00000285116 DCTN6O00399 190 aa9.33□□□□□ -0.92
SKA1-201ENST00000285116 LDLRAD4O15165 306 aa9.33□□□□□ -0.92
SKA1-201ENST00000285116 GATCO43716 136 aaKnown RBP9.33□□□□□ -0.92
SKA1-201ENST00000285116 NUDT21O43809 227 aaKnown RBP9.33□□□□□ -0.92
SKA1-201ENST00000285116 RPP14O95059 124 aaKnown RBP9.33□□□□□ -0.92
SKA1-201ENST00000285116 RAB3DO95716 219 aa9.33□□□□□ -0.92
SKA1-201ENST00000285116 MT-ATP6P00846 226 aa9.33□□□□□ -0.92
SKA1-201ENST00000285116 BGLAPP02818 100 aa9.33□□□□□ -0.92
SKA1-201ENST00000285116 GRPRP30550 384 aa9.33□□□□□ -0.92
SKA1-201ENST00000285116 PPICP45877 212 aa9.33□□□□□ -0.92
SKA1-201ENST00000285116 POU3F4P49335 361 aa9.33□□□□□ -0.92
SKA1-201ENST00000285116 PEA15Q15121 130 aa9.33□□□□□ -0.92
SKA1-201ENST00000285116 LRRC37A5PQ49AS3 106 aa9.33□□□□□ -0.92
SKA1-201ENST00000285116 GXYLT1Q4G148 440 aa9.33□□□□□ -0.92
SKA1-201ENST00000285116 WDR38Q5JTN6 314 aa9.33□□□□□ -0.92
SKA1-201ENST00000285116 BIVMQ86UB2 503 aa9.33□□□□□ -0.92
SKA1-201ENST00000285116 PAQR8Q8TEZ7 354 aa9.33□□□□□ -0.92
SKA1-201ENST00000285116 RNF141Q8WVD5 230 aa9.33□□□□□ -0.92
SKA1-201ENST00000285116 FAM3DQ96BQ1 224 aa9.33□□□□□ -0.92
SKA1-201ENST00000285116 FAM60AQ9NP50 221 aa9.33□□□□□ -0.92
SKA1-201ENST00000285116 MMP26Q9NRE1 261 aa9.33□□□□□ -0.92
SKA1-201ENST00000285116 UQCC1Q9NVA1 299 aa9.33□□□□□ -0.92
SKA1-201ENST00000285116 WSB2Q9NYS7 404 aaPredicted RBP9.33□□□□□ -0.92
SKA1-201ENST00000285116 LOC390937A0A1W2PQ73 354 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 MEIS3P1A6NDR6 274 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 OR2W5A6NFC9 320 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 BLOC1S5-TXNDC5H3BN57 136 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 PSMD9O00233 223 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 UBE2CO00762 179 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 ZNF264O43296 627 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 HCRTR1O43613 425 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 MAS1P04201 325 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 TPT1P13693 172 aaKnown RBP9.32□□□□□ -0.92
SKA1-201ENST00000285116 S100PP25815 95 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 DHRS2Q13268 280 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 HABP2Q14520 560 aaPredicted RBP9.32□□□□□ -0.92
SKA1-201ENST00000285116 SMCO1Q147U7 214 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 ATXN7L3Q14CW9 347 aaPredicted RBP9.32□□□□□ -0.92
SKA1-201ENST00000285116 PHF19Q5T6S3 580 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 IL34Q6ZMJ4 242 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 ZNF679Q8IYX0 411 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 OR5AP2Q8NGF4 316 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 OR1J2Q8NGS2 313 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 ZNF519Q8TB69 540 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 SLC37A2Q8TED4 501 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 UCK1Q9HA47 277 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 NIT2Q9NQR4 276 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 NOP16Q9Y3C1 178 aaKnown RBP9.32□□□□□ -0.92
SKA1-201ENST00000285116 A0A1W2PQD3 144 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 FRG2CA6NGY1 282 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 C5orf52A6NGY3 159 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 KLF8O95600 359 aaPredicted RBP9.32□□□□□ -0.92
SKA1-201ENST00000285116 F12P00748 615 aaPredicted RBP9.32□□□□□ -0.92
SKA1-201ENST00000285116 ITGA5P08648 1049 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 ST6GAL1P15907 406 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 PAX6P26367 422 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 PRKXP51817 358 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 EFNB2P52799 333 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 ATP1B3P54709 279 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 SRSF3P84103 164 aaKnown RBP9.32□□□□□ -0.92
SKA1-201ENST00000285116 CD226Q15762 336 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 C2orf76Q3KRA6 126 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 PLEKHN1Q494U1 663 aaPredicted RBP9.32□□□□□ -0.92
SKA1-201ENST00000285116 ATPAF1Q5TC12 328 aaPredicted RBP9.32□□□□□ -0.92
SKA1-201ENST00000285116 C5orf46Q6UWT4 87 aa9.32□□□□□ -0.92
SKA1-201ENST00000285116 PARGQ86W56 976 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms