RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 ACOT7LQ6ZUV0 252 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 KCTD9Q7L273 389 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 FAM122BQ7Z309 247 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 MDGA2Q7Z553 956 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 NT5CQ8TCD5 201 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 CCDC107Q8WV48 283 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 NKD1Q969G9 470 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 MRGPRFQ96AM1 343 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 C3orf49Q96BT1 292 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 TIMM29Q9BSF4 260 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 ALX4Q9H161 411 aaPredicted RBP10.2□□□□□ -0.78
SCLT1-201ENST00000281142 GHRLQ9UBU3 117 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 TMED7Q9Y3B3 224 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 WDR87Q6ZQQ6 2873 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 A0A087WV62 115 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 CCDC163A0A0D9SF12 145 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 H0Y8X5 98 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 CDC40O60508 579 aaKnown RBP eCLIP10.2□□□□□ -0.78
SCLT1-201ENST00000281142 PNPP00491 289 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 PLGP00747 810 aaPredicted RBP10.2□□□□□ -0.78
SCLT1-201ENST00000281142 RD3LP0DJH9 198 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 PGAM2P15259 253 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 ST6GAL1P15907 406 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 IGFALSP35858 605 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 TAS2R19P59542 299 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 RPS4XP62701 263 aaKnown RBP10.2□□□□□ -0.78
SCLT1-201ENST00000281142 INPP5JQ15735 1006 aaPredicted RBP10.2□□□□□ -0.78
SCLT1-201ENST00000281142 SGCAQ16586 387 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 Q3ZCU0 254 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 UQCC3Q6UW78 93 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 NPSR1Q6W5P4 371 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 WDR5BQ86VZ2 330 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 BHLHE23Q8NDY6 225 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 OR51A2Q8NGJ7 313 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 OR1J4Q8NGS1 313 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 FLVCR1-AS1Q8TAF5 88 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 TMED6Q8WW62 240 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 ROBO4Q8WZ75 1007 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 SGK3Q96BR1 496 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 CMBLQ96DG6 245 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 TM4SF19Q96DZ7 209 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 COMMD4Q9H0A8 199 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 SEBOXQ9HB31 216 aaPredicted RBP10.2□□□□□ -0.78
SCLT1-201ENST00000281142 TREM1Q9NP99 234 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 TNRC6BQ9UPQ9 1833 aaKnown RBP10.2□□□□□ -0.78
SCLT1-201ENST00000281142 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 A0A0B4J2A0 478 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 LOC100289279A0A1B0GTE1 492 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 PRR19A6NJB7 356 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 FARS2O95363 451 aaKnown RBP10.2□□□□□ -0.78
SCLT1-201ENST00000281142 CCR5P51681 352 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 SSTP61278 116 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 SKP1P63208 163 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 ZNF345Q14585 488 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 AKIRIN2Q53H80 203 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 MESTQ5EB52 335 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 ACER2Q5QJU3 275 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 OR52W1Q6IF63 320 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 GVQW1Q8N7I0 195 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 RCBTB1Q8NDN9 531 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 ANKRD9Q96BM1 317 aaPredicted RBP10.2□□□□□ -0.78
SCLT1-201ENST00000281142 C4orf45Q96LM5 186 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 LRFN5Q96NI6 719 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 POTEKPQ9BYX7 375 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 SYT4Q9H2B2 425 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 SRMSQ9H3Y6 488 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 SHPKQ9UHJ6 478 aa10.2□□□□□ -0.78
SCLT1-201ENST00000281142 MRPS18BQ9Y676 258 aaKnown RBP10.2□□□□□ -0.78
SCLT1-201ENST00000281142 KIF26BQ2KJY2 2108 aa10.19□□□□□ -0.78
SCLT1-201ENST00000281142 DCDC2BA2VCK2 349 aa10.19□□□□□ -0.78
SCLT1-201ENST00000281142 POM121BA6NF01 834 aa10.19□□□□□ -0.78
SCLT1-201ENST00000281142 C5orf52A6NGY3 159 aa10.19□□□□□ -0.78
SCLT1-201ENST00000281142 H0YGG7 62 aa10.19□□□□□ -0.78
SCLT1-201ENST00000281142 CSTAP01040 98 aa10.19□□□□□ -0.78
SCLT1-201ENST00000281142 SLC25A4P12235 298 aa10.19□□□□□ -0.78
SCLT1-201ENST00000281142 PRF1P14222 555 aa10.19□□□□□ -0.78
SCLT1-201ENST00000281142 ALOX5APP20292 161 aa10.19□□□□□ -0.78
SCLT1-201ENST00000281142 CCR4P51679 360 aa10.19□□□□□ -0.78
SCLT1-201ENST00000281142 ARF3P61204 181 aaPredicted RBP10.19□□□□□ -0.78
SCLT1-201ENST00000281142 GLYATL3Q5SZD4 288 aa10.19□□□□□ -0.78
SCLT1-201ENST00000281142 ZCCHC12Q6PEW1 402 aa10.19□□□□□ -0.78
SCLT1-201ENST00000281142 SFTPA2Q8IWL1 248 aa10.19□□□□□ -0.78
SCLT1-201ENST00000281142 GTPBP8Q8N3Z3 284 aaPredicted RBP10.19□□□□□ -0.78
SCLT1-201ENST00000281142 ADAD2Q8NCV1 583 aaKnown RBP10.19□□□□□ -0.78
SCLT1-201ENST00000281142 OR5AP2Q8NGF4 316 aa10.19□□□□□ -0.78
SCLT1-201ENST00000281142 CTHRC1Q96CG8 243 aa10.19□□□□□ -0.78
SCLT1-201ENST00000281142 SPSB2Q99619 263 aa10.19□□□□□ -0.78
SCLT1-201ENST00000281142 PRR13Q9NZ81 148 aa10.19□□□□□ -0.78
SCLT1-201ENST00000281142 WIPF3A6NGB9 483 aa10.19□□□□□ -0.78
SCLT1-201ENST00000281142 SLC17A2O00624 439 aa10.19□□□□□ -0.78
SCLT1-201ENST00000281142 UBE2CO00762 179 aa10.19□□□□□ -0.78
SCLT1-201ENST00000281142 FOXS1O43638 330 aa10.19□□□□□ -0.78
SCLT1-201ENST00000281142 AKR1C3P42330 323 aa10.19□□□□□ -0.78
SCLT1-201ENST00000281142 LSSP48449 732 aa10.19□□□□□ -0.78
SCLT1-201ENST00000281142 RBM39Q14498 530 aaKnown RBP10.19□□□□□ -0.78
SCLT1-201ENST00000281142 ALG10Q5BKT4 473 aa10.19□□□□□ -0.78
SCLT1-201ENST00000281142 PGAP1Q75T13 922 aa10.19□□□□□ -0.78
SCLT1-201ENST00000281142 TMEM200AQ86VY9 491 aa10.19□□□□□ -0.78
SCLT1-201ENST00000281142 ACBD4Q8NC06 268 aa10.19□□□□□ -0.78
SCLT1-201ENST00000281142 OR10R2Q8NGX6 335 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms