RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 THEM4Q5T1C6 240 aa15.94■□□□□ 0.14
CAPN1-201ENST00000279247 BCL2L15Q5TBC7 163 aa15.94■□□□□ 0.14
CAPN1-201ENST00000279247 ATP1A1-AS1Q5TC04 95 aa15.94■□□□□ 0.14
CAPN1-201ENST00000279247 ZNF227Q86WZ6 799 aa15.94■□□□□ 0.14
CAPN1-201ENST00000279247 OR10S1Q8NGN2 331 aa15.94■□□□□ 0.14
CAPN1-201ENST00000279247 ROBO4Q8WZ75 1007 aa15.94■□□□□ 0.14
CAPN1-201ENST00000279247 SOX7Q9BT81 388 aa15.94■□□□□ 0.14
CAPN1-201ENST00000279247 LHFPL6Q9Y693 200 aa15.94■□□□□ 0.14
CAPN1-201ENST00000279247 TRBV5-7A0A0A0MS05 114 aa15.93■□□□□ 0.14
CAPN1-201ENST00000279247 PINLYPA6NC86 204 aa15.93■□□□□ 0.14
CAPN1-201ENST00000279247 CBR3O75828 277 aa15.93■□□□□ 0.14
CAPN1-201ENST00000279247 ANOS1P23352 680 aa15.93■□□□□ 0.14
CAPN1-201ENST00000279247 GDF1P27539 372 aa15.93■□□□□ 0.14
CAPN1-201ENST00000279247 GDNFP39905 211 aa15.93■□□□□ 0.14
CAPN1-201ENST00000279247 SELENOPP49908 381 aa15.93■□□□□ 0.14
CAPN1-201ENST00000279247 ART1P52961 327 aa15.93■□□□□ 0.14
CAPN1-201ENST00000279247 SLC36A2Q495M3 483 aa15.93■□□□□ 0.14
CAPN1-201ENST00000279247 IL22RA1Q8N6P7 574 aa15.93■□□□□ 0.14
CAPN1-201ENST00000279247 SFXN2Q96NB2 322 aa15.93■□□□□ 0.14
CAPN1-201ENST00000279247 SRXN1Q9BYN0 137 aa15.93■□□□□ 0.14
CAPN1-201ENST00000279247 C1orf198Q9H425 327 aa15.93■□□□□ 0.14
CAPN1-201ENST00000279247 LRFN1Q9P244 771 aa15.93■□□□□ 0.14
CAPN1-201ENST00000279247 RCE1Q9Y256 329 aa15.93■□□□□ 0.14
CAPN1-201ENST00000279247 PCSK5Q92824 1860 aa15.93■□□□□ 0.14
CAPN1-201ENST00000279247 ZNF432O94892 652 aa15.93■□□□□ 0.14
CAPN1-201ENST00000279247 KDM4BO94953 1096 aa15.93■□□□□ 0.14
CAPN1-201ENST00000279247 POU3F4P49335 361 aa15.93■□□□□ 0.14
CAPN1-201ENST00000279247 TGIF1Q15583 401 aa15.93■□□□□ 0.14
CAPN1-201ENST00000279247 KCNJ8Q15842 424 aa15.93■□□□□ 0.14
CAPN1-201ENST00000279247 PHYHD1Q5SRE7 291 aa15.93■□□□□ 0.14
CAPN1-201ENST00000279247 OR6F1Q8NGZ6 308 aa15.93■□□□□ 0.14
CAPN1-201ENST00000279247 NKD1Q969G9 470 aa15.93■□□□□ 0.14
CAPN1-201ENST00000279247 MCUBQ9NWR8 336 aa15.93■□□□□ 0.14
CAPN1-201ENST00000279247 CKLFQ9UBR5 152 aa15.93■□□□□ 0.14
CAPN1-201ENST00000279247 HHLA2Q9UM44 414 aa15.93■□□□□ 0.14
CAPN1-201ENST00000279247 CAMK2AQ9UQM7 478 aa15.93■□□□□ 0.14
CAPN1-201ENST00000279247 ICAM2P13598 275 aa15.92■□□□□ 0.14
CAPN1-201ENST00000279247 ADH6P28332 368 aa15.92■□□□□ 0.14
CAPN1-201ENST00000279247 PITPNAQ00169 270 aa15.92■□□□□ 0.14
CAPN1-201ENST00000279247 SRYQ05066 204 aa15.92■□□□□ 0.14
CAPN1-201ENST00000279247 GLYATL3Q5SZD4 288 aa15.92■□□□□ 0.14
CAPN1-201ENST00000279247 FAM205BPQ63HN1 556 aa15.92■□□□□ 0.14
CAPN1-201ENST00000279247 CHAC2Q8WUX2 184 aa15.92■□□□□ 0.14
CAPN1-201ENST00000279247 SLC7A6Q92536 515 aa15.92■□□□□ 0.14
CAPN1-201ENST00000279247 FGGYQ96C11 551 aa15.92■□□□□ 0.14
CAPN1-201ENST00000279247 SPACA5Q96QH8 159 aa15.92■□□□□ 0.14
CAPN1-201ENST00000279247 G6PC2Q9NQR9 355 aa15.92■□□□□ 0.14
CAPN1-201ENST00000279247 CYB5R1Q9UHQ9 305 aa15.92■□□□□ 0.14
CAPN1-201ENST00000279247 FREM1Q5H8C1 2179 aa15.92■□□□□ 0.14
CAPN1-201ENST00000279247 SVILO95425 2214 aa15.92■□□□□ 0.14
CAPN1-201ENST00000279247 AKAP13Q12802 2813 aa15.92■□□□□ 0.14
CAPN1-201ENST00000279247 NHLRC1Q6VVB1 395 aa15.92■□□□□ 0.14
CAPN1-201ENST00000279247 SGCZQ96LD1 299 aa15.92■□□□□ 0.14
CAPN1-201ENST00000279247 ZMAT3Q9HA38 289 aaKnown RBP15.92■□□□□ 0.14
CAPN1-201ENST00000279247 MYO7BQ6PIF6 2116 aa15.92■□□□□ 0.14
CAPN1-201ENST00000279247 PRR33A8MZF0 331 aa15.92■□□□□ 0.14
CAPN1-201ENST00000279247 HPP00738 406 aa15.92■□□□□ 0.14
CAPN1-201ENST00000279247 IGHEP01854 428 aa15.92■□□□□ 0.14
CAPN1-201ENST00000279247 DLX5P56178 289 aa15.92■□□□□ 0.14
CAPN1-201ENST00000279247 BEST4Q8NFU0 473 aa15.92■□□□□ 0.14
CAPN1-201ENST00000279247 ITFG2Q969R8 447 aa15.92■□□□□ 0.14
CAPN1-201ENST00000279247 ZNF837Q96EG3 531 aaPredicted RBP15.92■□□□□ 0.14
CAPN1-201ENST00000279247 KLHL9Q9P2J3 617 aa15.92■□□□□ 0.14
CAPN1-201ENST00000279247 BOLA1Q9Y3E2 137 aa15.92■□□□□ 0.14
CAPN1-201ENST00000279247 ORC5O43913 435 aa15.91■□□□□ 0.14
CAPN1-201ENST00000279247 CXCL13O43927 109 aa15.91■□□□□ 0.14
CAPN1-201ENST00000279247 SERPINA7P05543 415 aa15.91■□□□□ 0.14
CAPN1-201ENST00000279247 CSNK1A1P48729 337 aa15.91■□□□□ 0.14
CAPN1-201ENST00000279247 CCR9P51686 369 aa15.91■□□□□ 0.14
CAPN1-201ENST00000279247 OR6X1Q8NH79 312 aa15.91■□□□□ 0.14
CAPN1-201ENST00000279247 OR51E1Q8TCB6 317 aa15.91■□□□□ 0.14
CAPN1-201ENST00000279247 HAVCR2Q8TDQ0 301 aa15.91■□□□□ 0.14
CAPN1-201ENST00000279247 RNF133Q8WVZ7 376 aa15.91■□□□□ 0.14
CAPN1-201ENST00000279247 CAPSLQ8WWF8 208 aa15.91■□□□□ 0.14
CAPN1-201ENST00000279247 PSMF1Q92530 271 aa15.91■□□□□ 0.14
CAPN1-201ENST00000279247 PIGQQ9BRB3 760 aa15.91■□□□□ 0.14
CAPN1-201ENST00000279247 LRFN3Q9BTN0 628 aa15.91■□□□□ 0.14
CAPN1-201ENST00000279247 SH2D2AQ9NP31 389 aa15.91■□□□□ 0.14
CAPN1-201ENST00000279247 STEAP1Q9UHE8 339 aa15.91■□□□□ 0.14
CAPN1-201ENST00000279247 FOXJ3Q9UPW0 622 aa15.91■□□□□ 0.14
CAPN1-201ENST00000279247 CENPXA8MT69 81 aa15.91■□□□□ 0.14
CAPN1-201ENST00000279247 RAF1P04049 648 aa15.91■□□□□ 0.14
CAPN1-201ENST00000279247 FAM157BP0CG42 384 aa15.91■□□□□ 0.14
CAPN1-201ENST00000279247 GUCA1AP43080 201 aaPredicted RBP15.91■□□□□ 0.14
CAPN1-201ENST00000279247 MMP15P51511 669 aa15.91■□□□□ 0.14
CAPN1-201ENST00000279247 SNTB2Q13425 540 aaKnown RBP15.91■□□□□ 0.14
CAPN1-201ENST00000279247 TRIP6Q15654 476 aaKnown RBP15.91■□□□□ 0.14
CAPN1-201ENST00000279247 CDCP2Q5VXM1 449 aa15.91■□□□□ 0.14
CAPN1-201ENST00000279247 ZBTB8BQ8NAP8 495 aaPredicted RBP15.91■□□□□ 0.14
CAPN1-201ENST00000279247 TP63Q9H3D4 680 aaPredicted RBP15.91■□□□□ 0.14
CAPN1-201ENST00000279247 CCDC187A0A096LP49 1063 aa15.9■□□□□ 0.14
CAPN1-201ENST00000279247 TLX3O43711 291 aaPredicted RBP15.9■□□□□ 0.14
CAPN1-201ENST00000279247 ACSM4P0C7M7 580 aa15.9■□□□□ 0.14
CAPN1-201ENST00000279247 GABREP78334 506 aa15.9■□□□□ 0.14
CAPN1-201ENST00000279247 NAA40Q86UY6 237 aa15.9■□□□□ 0.14
CAPN1-201ENST00000279247 PHF21AQ96BD5 680 aa15.9■□□□□ 0.14
CAPN1-201ENST00000279247 FAM71F1Q96KD3 344 aaPredicted RBP15.9■□□□□ 0.14
CAPN1-201ENST00000279247 SIGLEC12Q96PQ1 595 aa15.9■□□□□ 0.14
CAPN1-201ENST00000279247 ZNF416Q9BWM5 594 aa15.9■□□□□ 0.14
CAPN1-201ENST00000279247 CACNG6Q9BXT2 260 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms