RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 A0A1W2PQ09 198 aa8.28□□□□□ -1.08
SSR3-201ENST00000265044 MEGF11A6BM72 1044 aa8.28□□□□□ -1.08
SSR3-201ENST00000265044 E9PQ18 207 aa8.28□□□□□ -1.08
SSR3-201ENST00000265044 TRAF3IP2O43734 574 aaPredicted RBP8.28□□□□□ -1.08
SSR3-201ENST00000265044 PITPNBP48739 271 aa8.28□□□□□ -1.08
SSR3-201ENST00000265044 CX3CR1P49238 355 aa8.28□□□□□ -1.08
SSR3-201ENST00000265044 STK11Q15831 433 aa8.28□□□□□ -1.08
SSR3-201ENST00000265044 CCBE1Q6UXH8 406 aaPredicted RBP8.28□□□□□ -1.08
SSR3-201ENST00000265044 GCNT2Q8N0V5 402 aa8.28□□□□□ -1.08
SSR3-201ENST00000265044 GDPD1Q8N9F7 314 aa8.28□□□□□ -1.08
SSR3-201ENST00000265044 OR10AC1Q8NH08 325 aa8.28□□□□□ -1.08
SSR3-201ENST00000265044 PSMF1Q92530 271 aa8.28□□□□□ -1.08
SSR3-201ENST00000265044 C4orf45Q96LM5 186 aa8.28□□□□□ -1.08
SSR3-201ENST00000265044 CCDC32Q9BV29 185 aa8.28□□□□□ -1.08
SSR3-201ENST00000265044 SLC22A4Q9H015 551 aa8.28□□□□□ -1.08
SSR3-201ENST00000265044 NIPAL2Q9H841 368 aa8.28□□□□□ -1.08
SSR3-201ENST00000265044 LIN7BQ9HAP6 207 aa8.28□□□□□ -1.08
SSR3-201ENST00000265044 AKIP1Q9NQ31 210 aa8.28□□□□□ -1.08
SSR3-201ENST00000265044 MRPL22Q9NWU5 206 aaKnown RBP8.28□□□□□ -1.08
SSR3-201ENST00000265044 R4GMQ9 66 aa8.28□□□□□ -1.08
SSR3-201ENST00000265044 ARID1AO14497 2285 aa8.28□□□□□ -1.08
SSR3-201ENST00000265044 IGLV1-36A0A0B4J1U3 117 aa8.28□□□□□ -1.08
SSR3-201ENST00000265044 ISPDA4D126 451 aa8.28□□□□□ -1.08
SSR3-201ENST00000265044 METTL21EPA6NDL7 271 aa8.28□□□□□ -1.08
SSR3-201ENST00000265044 ZNF814B7Z6K7 855 aa8.28□□□□□ -1.08
SSR3-201ENST00000265044 MKRN2OSH3BPM6 223 aa8.28□□□□□ -1.08
SSR3-201ENST00000265044 OGG1O15527 345 aa8.28□□□□□ -1.08
SSR3-201ENST00000265044 MTRF1O75570 445 aaKnown RBP8.28□□□□□ -1.08
SSR3-201ENST00000265044 UBE2NP61088 152 aaKnown RBP8.28□□□□□ -1.08
SSR3-201ENST00000265044 LINC00299Q6ZSB3 139 aa8.28□□□□□ -1.08
SSR3-201ENST00000265044 OR51D1Q8NGF3 324 aa8.28□□□□□ -1.08
SSR3-201ENST00000265044 SYNPRQ8TBG9 265 aa8.28□□□□□ -1.08
SSR3-201ENST00000265044 RNF128Q8TEB7 428 aa8.28□□□□□ -1.08
SSR3-201ENST00000265044 PHYHIPQ92561 330 aa8.28□□□□□ -1.08
SSR3-201ENST00000265044 KCTD12Q96CX2 325 aaKnown RBP8.28□□□□□ -1.08
SSR3-201ENST00000265044 TRIB1Q96RU8 372 aa8.28□□□□□ -1.08
SSR3-201ENST00000265044 ATF6BQ99941 703 aa8.28□□□□□ -1.08
SSR3-201ENST00000265044 ABCG5Q9H222 651 aa8.28□□□□□ -1.08
SSR3-201ENST00000265044 PAQR5Q9NXK6 330 aaPredicted RBP8.28□□□□□ -1.08
SSR3-201ENST00000265044 ABRACLQ9P1F3 81 aa8.28□□□□□ -1.08
SSR3-201ENST00000265044 POLEQ07864 2286 aa8.28□□□□□ -1.08
SSR3-201ENST00000265044 IGLV3-32A0A0A0MS00 114 aa8.28□□□□□ -1.08
SSR3-201ENST00000265044 IGKV1D-43A0A0B4J1Z2 117 aa8.28□□□□□ -1.08
SSR3-201ENST00000265044 UBCP0CG48 685 aaKnown RBP8.28□□□□□ -1.08
SSR3-201ENST00000265044 IL7P13232 177 aa8.28□□□□□ -1.08
SSR3-201ENST00000265044 PCBD1P61457 104 aa8.28□□□□□ -1.08
SSR3-201ENST00000265044 STAC2Q6ZMT1 411 aa8.28□□□□□ -1.08
SSR3-201ENST00000265044 OR51A4Q8NGJ6 313 aa8.28□□□□□ -1.08
SSR3-201ENST00000265044 AKR7LQ8NHP1 331 aa8.28□□□□□ -1.08
SSR3-201ENST00000265044 FOXB1Q99853 325 aa8.28□□□□□ -1.08
SSR3-201ENST00000265044 MED18Q9BUE0 208 aa8.28□□□□□ -1.08
SSR3-201ENST00000265044 SRXN1Q9BYN0 137 aa8.28□□□□□ -1.08
SSR3-201ENST00000265044 NELFAQ9H3P2 528 aa8.28□□□□□ -1.08
SSR3-201ENST00000265044 CGGBP1Q9UFW8 167 aaPredicted RBP8.28□□□□□ -1.08
SSR3-201ENST00000265044 SF3B6Q9Y3B4 125 aaKnown RBP8.28□□□□□ -1.08
SSR3-201ENST00000265044 SLC22A20A6NK97 555 aa8.27□□□□□ -1.09
SSR3-201ENST00000265044 NEURL1O76050 574 aa8.27□□□□□ -1.09
SSR3-201ENST00000265044 CD3GP09693 182 aa8.27□□□□□ -1.09
SSR3-201ENST00000265044 ARSBP15848 533 aa8.27□□□□□ -1.09
SSR3-201ENST00000265044 ELK1P19419 428 aa8.27□□□□□ -1.09
SSR3-201ENST00000265044 RAB3AP20336 220 aa8.27□□□□□ -1.09
SSR3-201ENST00000265044 ZNF121P58317 390 aaPredicted RBP8.27□□□□□ -1.09
SSR3-201ENST00000265044 GLYATL3Q5SZD4 288 aa8.27□□□□□ -1.09
SSR3-201ENST00000265044 DCDC5Q6ZRR9 648 aa8.27□□□□□ -1.09
SSR3-201ENST00000265044 TUSC5Q8IXB3 177 aa8.27□□□□□ -1.09
SSR3-201ENST00000265044 HPS1Q92902 700 aa8.27□□□□□ -1.09
SSR3-201ENST00000265044 SPACA5Q96QH8 159 aa8.27□□□□□ -1.09
SSR3-201ENST00000265044 HIST1H2AAQ96QV6 131 aa8.27□□□□□ -1.09
SSR3-201ENST00000265044 PBOV1Q9GZY1 135 aa8.27□□□□□ -1.09
SSR3-201ENST00000265044 OR10A2Q9H208 303 aa8.27□□□□□ -1.09
SSR3-201ENST00000265044 TAS2R4Q9NYW5 299 aa8.27□□□□□ -1.09
SSR3-201ENST00000265044 ST6GALNAC2Q9UJ37 374 aa8.27□□□□□ -1.09
SSR3-201ENST00000265044 IGF2RP11717 2491 aa8.27□□□□□ -1.09
SSR3-201ENST00000265044 NCOR2Q9Y618 2525 aa8.27□□□□□ -1.09
SSR3-201ENST00000265044 TRAV18A0A075B6X5 111 aa8.27□□□□□ -1.09
SSR3-201ENST00000265044 PINLYPA6NC86 204 aa8.27□□□□□ -1.09
SSR3-201ENST00000265044 M0R135 149 aa8.27□□□□□ -1.09
SSR3-201ENST00000265044 CSTBP04080 98 aaKnown RBP8.27□□□□□ -1.09
SSR3-201ENST00000265044 TGFBR3Q03167 851 aa8.27□□□□□ -1.09
SSR3-201ENST00000265044 CDC20Q12834 499 aa8.27□□□□□ -1.09
SSR3-201ENST00000265044 CBX3Q13185 183 aa8.27□□□□□ -1.09
SSR3-201ENST00000265044 SLC25A53Q5H9E4 307 aa8.27□□□□□ -1.09
SSR3-201ENST00000265044 AWAT2Q6E213 333 aa8.27□□□□□ -1.09
SSR3-201ENST00000265044 ASCL5Q7RTU5 278 aa8.27□□□□□ -1.09
SSR3-201ENST00000265044 PIP4P1Q86T03 277 aa8.27□□□□□ -1.09
SSR3-201ENST00000265044 FAM109AQ8N4B1 249 aa8.27□□□□□ -1.09
SSR3-201ENST00000265044 OR5D18Q8NGL1 313 aa8.27□□□□□ -1.09
SSR3-201ENST00000265044 ADAMTS14Q8WXS8 1223 aa8.27□□□□□ -1.09
SSR3-201ENST00000265044 INTS12Q96CB8 462 aaKnown RBP8.27□□□□□ -1.09
SSR3-201ENST00000265044 ZNF799Q96GE5 643 aa8.27□□□□□ -1.09
SSR3-201ENST00000265044 GPR84Q9NQS5 396 aa8.27□□□□□ -1.09
SSR3-201ENST00000265044 PLEKHB1Q9UF11 243 aaPredicted RBP8.27□□□□□ -1.09
SSR3-201ENST00000265044 LOC102725191A0A1B0GVB3 256 aa8.27□□□□□ -1.09
SSR3-201ENST00000265044 CSN2P05814 226 aa8.27□□□□□ -1.09
SSR3-201ENST00000265044 ERCC1P07992 297 aaPredicted RBP8.27□□□□□ -1.09
SSR3-201ENST00000265044 PGA4P0DJD7 388 aa8.27□□□□□ -1.09
SSR3-201ENST00000265044 PGA3P0DJD8 388 aa8.27□□□□□ -1.09
SSR3-201ENST00000265044 EPXP11678 715 aa8.27□□□□□ -1.09
SSR3-201ENST00000265044 POU3F4P49335 361 aa8.27□□□□□ -1.09
SSR3-201ENST00000265044 SUCLG1P53597 346 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms