RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 STACQ99469 402 aa16.43■□□□□ 0.22
COL5A3-201ENST00000264828 SEMA4CQ9C0C4 833 aa16.43■□□□□ 0.22
COL5A3-201ENST00000264828 ZNF768Q9H5H4 540 aaKnown RBP16.43■□□□□ 0.22
COL5A3-201ENST00000264828 MMACHCQ9Y4U1 282 aa16.43■□□□□ 0.22
COL5A3-201ENST00000264828 TMEM129A0AVI4 362 aa16.43■□□□□ 0.22
COL5A3-201ENST00000264828 ST8SIA3O43173 380 aa16.43■□□□□ 0.22
COL5A3-201ENST00000264828 ALOX12BO75342 701 aa16.43■□□□□ 0.22
COL5A3-201ENST00000264828 ALX3O95076 343 aa16.43■□□□□ 0.22
COL5A3-201ENST00000264828 UBE2IP63279 158 aaKnown RBP16.43■□□□□ 0.22
COL5A3-201ENST00000264828 ZNF90Q03938 601 aa16.43■□□□□ 0.22
COL5A3-201ENST00000264828 XKR7Q5GH72 579 aa16.43■□□□□ 0.22
COL5A3-201ENST00000264828 TMEM81Q6P7N7 255 aa16.43■□□□□ 0.22
COL5A3-201ENST00000264828 VN1R2Q8NFZ6 395 aa16.43■□□□□ 0.22
COL5A3-201ENST00000264828 CSF3RQ99062 836 aa16.43■□□□□ 0.22
COL5A3-201ENST00000264828 UQCC2Q9BRT2 126 aa16.43■□□□□ 0.22
COL5A3-201ENST00000264828 SLC22A11Q9NSA0 550 aa16.43■□□□□ 0.22
COL5A3-201ENST00000264828 UFSP2Q9NUQ7 469 aa16.43■□□□□ 0.22
COL5A3-201ENST00000264828 MT-ATP6P00846 226 aa16.42■□□□□ 0.22
COL5A3-201ENST00000264828 BAMBIQ13145 260 aa16.42■□□□□ 0.22
COL5A3-201ENST00000264828 ZNF718Q3SXZ3 478 aa16.42■□□□□ 0.22
COL5A3-201ENST00000264828 ZNF346Q9UL40 294 aaKnown RBP16.42■□□□□ 0.22
COL5A3-201ENST00000264828 FLVCR1Q9Y5Y0 555 aa16.42■□□□□ 0.22
COL5A3-201ENST00000264828 SLCO1B1Q9Y6L6 691 aa16.42■□□□□ 0.22
COL5A3-201ENST00000264828 OR5H14A6NHG9 310 aa16.42■□□□□ 0.22
COL5A3-201ENST00000264828 F11P03951 625 aa16.42■□□□□ 0.22
COL5A3-201ENST00000264828 CPN1P15169 458 aa16.42■□□□□ 0.22
COL5A3-201ENST00000264828 RAC1P63000 192 aa16.42■□□□□ 0.22
COL5A3-201ENST00000264828 HSF1Q00613 529 aa16.42■□□□□ 0.22
COL5A3-201ENST00000264828 OR8G1Q15617 311 aa16.42■□□□□ 0.22
COL5A3-201ENST00000264828 RYDENQ9NUL5 291 aaKnown RBP16.42■□□□□ 0.22
COL5A3-201ENST00000264828 PIPP12273 146 aaPredicted RBP16.42■□□□□ 0.22
COL5A3-201ENST00000264828 PTBP1P26599 531 aaKnown RBP eCLIP16.42■□□□□ 0.22
COL5A3-201ENST00000264828 SOX18P35713 384 aa16.42■□□□□ 0.22
COL5A3-201ENST00000264828 BTNL8Q6UX41 500 aa16.42■□□□□ 0.22
COL5A3-201ENST00000264828 WDR88Q6ZMY6 472 aa16.42■□□□□ 0.22
COL5A3-201ENST00000264828 GRINAQ7Z429 371 aa16.42■□□□□ 0.22
COL5A3-201ENST00000264828 BCORP1Q8N888 145 aa16.42■□□□□ 0.22
COL5A3-201ENST00000264828 KDF1Q8NAX2 398 aaPredicted RBP16.42■□□□□ 0.22
COL5A3-201ENST00000264828 OR51F2Q8NH61 342 aa16.42■□□□□ 0.22
COL5A3-201ENST00000264828 NMES1Q9C002 83 aa16.42■□□□□ 0.22
COL5A3-201ENST00000264828 HINT3Q9NQE9 182 aaKnown RBP16.42■□□□□ 0.22
COL5A3-201ENST00000264828 A0A1B0GTW7 788 aa16.42■□□□□ 0.22
COL5A3-201ENST00000264828 ZNF385BQ569K4 471 aa16.42■□□□□ 0.22
COL5A3-201ENST00000264828 YRDCQ86U90 279 aaKnown RBP16.42■□□□□ 0.22
COL5A3-201ENST00000264828 SLAMF6Q96DU3 332 aa16.42■□□□□ 0.22
COL5A3-201ENST00000264828 SEH1LQ96EE3 360 aa16.42■□□□□ 0.22
COL5A3-201ENST00000264828 hCG_1809904A0A1W2PP81 198 aa16.42■□□□□ 0.22
COL5A3-201ENST00000264828 A0A1W2PPE2 198 aa16.42■□□□□ 0.22
COL5A3-201ENST00000264828 A0A1W2PR64 198 aa16.42■□□□□ 0.22
COL5A3-201ENST00000264828 A0A1W2PRV1 198 aa16.42■□□□□ 0.22
COL5A3-201ENST00000264828 AKR7A2O43488 359 aa16.42■□□□□ 0.22
COL5A3-201ENST00000264828 OR5B3Q8NH48 314 aa16.42■□□□□ 0.22
COL5A3-201ENST00000264828 RPUSD4Q96CM3 377 aaKnown RBP16.42■□□□□ 0.22
COL5A3-201ENST00000264828 P2RY12Q9H244 342 aa16.42■□□□□ 0.22
COL5A3-201ENST00000264828 BTBD17A6NE02 478 aa16.41■□□□□ 0.22
COL5A3-201ENST00000264828 TLCD2A6NGC4 264 aa16.41■□□□□ 0.22
COL5A3-201ENST00000264828 BAK1Q16611 211 aa16.41■□□□□ 0.22
COL5A3-201ENST00000264828 OR5K3A6NET4 321 aa16.41■□□□□ 0.22
COL5A3-201ENST00000264828 QDPRP09417 244 aa16.41■□□□□ 0.22
COL5A3-201ENST00000264828 ARNTP27540 789 aa16.41■□□□□ 0.22
COL5A3-201ENST00000264828 SNTB1Q13884 538 aaKnown RBP16.41■□□□□ 0.22
COL5A3-201ENST00000264828 FAM74A1Q5RGS3 127 aa16.41■□□□□ 0.22
COL5A3-201ENST00000264828 APH1BQ8WW43 257 aa16.41■□□□□ 0.22
COL5A3-201ENST00000264828 APH1AQ96BI3 265 aa16.41■□□□□ 0.22
COL5A3-201ENST00000264828 GSX2Q9BZM3 304 aa16.41■□□□□ 0.22
COL5A3-201ENST00000264828 TAF1P21675 1872 aa16.41■□□□□ 0.22
COL5A3-201ENST00000264828 WNT11O96014 354 aa16.41■□□□□ 0.22
COL5A3-201ENST00000264828 MAML2Q8IZL2 1156 aaPredicted RBP16.41■□□□□ 0.22
COL5A3-201ENST00000264828 CMTM4Q8IZR5 234 aa16.41■□□□□ 0.22
COL5A3-201ENST00000264828 MFSD4AQ8N468 514 aa16.41■□□□□ 0.22
COL5A3-201ENST00000264828 FBXW5Q969U6 566 aa16.41■□□□□ 0.22
COL5A3-201ENST00000264828 MS4A6EQ96DS6 147 aa16.41■□□□□ 0.22
COL5A3-201ENST00000264828 RIMS4Q9H426 269 aaPredicted RBP16.41■□□□□ 0.22
COL5A3-201ENST00000264828 GLI3P10071 1580 aa16.41■□□□□ 0.22
COL5A3-201ENST00000264828 CHEK1O14757 476 aa16.41■□□□□ 0.22
COL5A3-201ENST00000264828 PRKNO60260 465 aaPredicted RBP16.41■□□□□ 0.22
COL5A3-201ENST00000264828 CHRM2P08172 466 aa16.41■□□□□ 0.22
COL5A3-201ENST00000264828 GABRB1P18505 474 aa16.41■□□□□ 0.22
COL5A3-201ENST00000264828 TBPP20226 339 aa16.41■□□□□ 0.22
COL5A3-201ENST00000264828 CD1CP29017 333 aa16.41■□□□□ 0.22
COL5A3-201ENST00000264828 TFAP2EQ6VUC0 442 aa16.41■□□□□ 0.22
COL5A3-201ENST00000264828 UBAC2Q8NBM4 344 aa16.41■□□□□ 0.22
COL5A3-201ENST00000264828 RTL8AQ9BWD3 113 aa16.41■□□□□ 0.22
COL5A3-201ENST00000264828 NPFFR2Q9Y5X5 522 aa16.41■□□□□ 0.22
COL5A3-201ENST00000264828 H7BYZ3 331 aa16.4■□□□□ 0.22
COL5A3-201ENST00000264828 ZNF85Q03923 595 aa16.4■□□□□ 0.22
COL5A3-201ENST00000264828 KLHDC8BQ8IXV7 354 aa16.4■□□□□ 0.22
COL5A3-201ENST00000264828 SLCO4A1Q96BD0 722 aa16.4■□□□□ 0.22
COL5A3-201ENST00000264828 KIR3DX1Q9H7L2 352 aa16.4■□□□□ 0.22
COL5A3-201ENST00000264828 SLC5A6Q9Y289 635 aa16.4■□□□□ 0.22
COL5A3-201ENST00000264828 LRRC30A6NM36 301 aa16.4■□□□□ 0.22
COL5A3-201ENST00000264828 EDIL3O43854 480 aa16.4■□□□□ 0.22
COL5A3-201ENST00000264828 OR2F2O95006 317 aa16.4■□□□□ 0.22
COL5A3-201ENST00000264828 RPS27P42677 84 aaKnown RBP16.4■□□□□ 0.22
COL5A3-201ENST00000264828 OR2F1Q13607 317 aa16.4■□□□□ 0.22
COL5A3-201ENST00000264828 TMEM52BQ4KMG9 183 aa16.4■□□□□ 0.22
COL5A3-201ENST00000264828 RPL7L1Q6DKI1 246 aaKnown RBP16.4■□□□□ 0.22
COL5A3-201ENST00000264828 SSX7Q7RTT5 188 aa16.4■□□□□ 0.22
COL5A3-201ENST00000264828 ZFPM2Q8WW38 1151 aa16.4■□□□□ 0.22
COL5A3-201ENST00000264828 NXPE3Q969Y0 559 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms