RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 INPP5JQ15735 1006 aaPredicted RBP7.62□□□□□ -1.19
LDB3-201ENST00000263066 SLC35D3Q5M8T2 416 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 FRG2Q64ET8 278 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 REEP3Q6NUK4 255 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 SHISA6Q6ZSJ9 500 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 GABRG1Q8N1C3 465 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 NXPE1Q8N323 547 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 BBS1Q8NFJ9 593 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 NUDT10Q8NFP7 164 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 GPBAR1Q8TDU6 330 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 RHBDD1Q8TEB9 315 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 NUDCD2Q8WVJ2 157 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 MR1Q95460 341 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 R3HDM4Q96D70 268 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 MRGPRX1Q96LB2 322 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 WDR92Q96MX6 357 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 TECTBQ96PL2 329 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 FRG2BQ96QU4 278 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 FAAP24Q9BTP7 215 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 MED20Q9H944 212 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.62□□□□□ -1.19
LDB3-201ENST00000263066 COL4A4P53420 1690 aaPredicted RBP7.62□□□□□ -1.19
LDB3-201ENST00000263066 TNFSF12O43508 249 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 ITGA5P08648 1049 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 LIMS3P0CW19 117 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 LIMS4P0CW20 117 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 GPX2P18283 190 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 BMI1P35226 326 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 TSFMP43897 325 aaKnown RBP7.62□□□□□ -1.19
LDB3-201ENST00000263066 GPR4P46093 362 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 IKZF1Q13422 519 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 KLF9Q13886 244 aaPredicted RBP7.62□□□□□ -1.19
LDB3-201ENST00000263066 CEBPEQ15744 281 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 ATP6V1FQ16864 119 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 COX20Q5RI15 118 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 COL5A1-AS1Q5SY13 56 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 ZNF322Q6U7Q0 402 aaPredicted RBP7.62□□□□□ -1.19
LDB3-201ENST00000263066 TOMM20LQ6UXN7 152 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 TMPRSS11FQ6ZWK6 438 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 SYT13Q7L8C5 426 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 SP7Q8TDD2 431 aaPredicted RBP7.62□□□□□ -1.19
LDB3-201ENST00000263066 TMEM18Q96B42 140 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 ELSPBP1Q96BH3 223 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 FAM46AQ96IP4 442 aaKnown RBP7.62□□□□□ -1.19
LDB3-201ENST00000263066 TMEM121BQ9BXQ6 578 aaPredicted RBP7.62□□□□□ -1.19
LDB3-201ENST00000263066 APMAPQ9HDC9 416 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 GLRX2Q9NS18 164 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 FTSJ1Q9UET6 329 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 CBLCQ9ULV8 474 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 DOCK9Q9BZ29 2069 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 PCNX1Q96RV3 2341 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 GLOD5A6NK44 160 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 H7BY64 318 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 SOCS6O14544 535 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 SCN2BO60939 215 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 CA11O75493 328 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 PGA3P0DJD8 388 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 PVRP15151 417 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 PTGER1P34995 402 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 ID4P47928 161 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 NRG3P56975 720 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 ID2Q02363 134 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 TMEM255AQ5JRV8 349 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 FAHD2BQ6P2I3 314 aaPredicted RBP7.62□□□□□ -1.19
LDB3-201ENST00000263066 PODNL1Q6PEZ8 512 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 ZNF836Q6ZNA1 936 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 LIMS2Q7Z4I7 341 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 DCXRQ7Z4W1 244 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 UBE3DQ7Z6J8 389 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 C1orf87Q8N0U7 546 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 CPXM2Q8N436 756 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 TMEM104Q8NE00 496 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 OR51L1Q8NGJ5 315 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 OR4C16Q8NGL9 310 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 SVIPQ8NHG7 77 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 GPR119Q8TDV5 335 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 FAHD2AQ96GK7 314 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 PRAP1Q96NZ9 151 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 SGK2Q9HBY8 427 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 NPDC1Q9NQX5 325 aaPredicted RBP7.62□□□□□ -1.19
LDB3-201ENST00000263066 HRASLS2Q9NWW9 162 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 IKZF2Q9UKS7 526 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 PPT2Q9UMR5 302 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 ZFHX4Q86UP3 3567 aa7.62□□□□□ -1.19
LDB3-201ENST00000263066 LNP1A1A4G5 178 aa7.61□□□□□ -1.19
LDB3-201ENST00000263066 TMEM202A6NGA9 273 aa7.61□□□□□ -1.19
LDB3-201ENST00000263066 EIF1AYO14602 144 aaKnown RBP7.61□□□□□ -1.19
LDB3-201ENST00000263066 EMC8O43402 210 aa7.61□□□□□ -1.19
LDB3-201ENST00000263066 CTSLP07711 333 aa7.61□□□□□ -1.19
LDB3-201ENST00000263066 CSF1P09603 554 aa7.61□□□□□ -1.19
LDB3-201ENST00000263066 FOLR2P14207 255 aa7.61□□□□□ -1.19
LDB3-201ENST00000263066 COL9A1P20849 921 aa7.61□□□□□ -1.19
LDB3-201ENST00000263066 EIF1AXP47813 144 aaKnown RBP7.61□□□□□ -1.19
LDB3-201ENST00000263066 CXADRP78310 365 aa7.61□□□□□ -1.19
LDB3-201ENST00000263066 ARL6IP1Q15041 203 aa7.61□□□□□ -1.19
LDB3-201ENST00000263066 RIPPLY2Q5TAB7 128 aa7.61□□□□□ -1.19
LDB3-201ENST00000263066 LYPLAL1Q5VWZ2 237 aa7.61□□□□□ -1.19
LDB3-201ENST00000263066 DBX2Q6ZNG2 339 aa7.61□□□□□ -1.19
LDB3-201ENST00000263066 FAM219AQ8IW50 185 aa7.61□□□□□ -1.19
LDB3-201ENST00000263066 TEX26Q8N6G2 289 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms