RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 AMBNQ9NP70 447 aa14.42□□□□□ -0.1
CHCHD3-201ENST00000262570 RTTNQ86VV8 2226 aa14.42□□□□□ -0.1
CHCHD3-201ENST00000262570 LOC100509620A0A075B734 347 aa14.41□□□□□ -0.1
CHCHD3-201ENST00000262570 IGHV2OR16-5A0A0B4J2B6 119 aa14.41□□□□□ -0.1
CHCHD3-201ENST00000262570 OR6C6A6NF89 314 aa14.41□□□□□ -0.1
CHCHD3-201ENST00000262570 CTAG2O75638 210 aa14.41□□□□□ -0.1
CHCHD3-201ENST00000262570 CRYAAP02489 173 aa14.41□□□□□ -0.1
CHCHD3-201ENST00000262570 ZNF35P13682 527 aa14.41□□□□□ -0.1
CHCHD3-201ENST00000262570 ALOX5APP20292 161 aa14.41□□□□□ -0.1
CHCHD3-201ENST00000262570 MYF6P23409 242 aa14.41□□□□□ -0.1
CHCHD3-201ENST00000262570 STOMP27105 288 aa14.41□□□□□ -0.1
CHCHD3-201ENST00000262570 NUDT6P53370 316 aa14.41□□□□□ -0.1
CHCHD3-201ENST00000262570 HCCSP53701 268 aa14.41□□□□□ -0.1
CHCHD3-201ENST00000262570 TMEM154Q6P9G4 183 aa14.41□□□□□ -0.1
CHCHD3-201ENST00000262570 ZNF454Q8N9F8 522 aa14.41□□□□□ -0.1
CHCHD3-201ENST00000262570 OR1F12Q8NHA8 337 aa14.41□□□□□ -0.1
CHCHD3-201ENST00000262570 C14orf79Q96F83 325 aa14.41□□□□□ -0.1
CHCHD3-201ENST00000262570 ABHD6Q9BV23 337 aa14.41□□□□□ -0.1
CHCHD3-201ENST00000262570 HDHD2Q9H0R4 259 aa14.41□□□□□ -0.1
CHCHD3-201ENST00000262570 ATPIF1Q9UII2 106 aa14.41□□□□□ -0.1
CHCHD3-201ENST00000262570 CENPEQ02224 2701 aa14.41□□□□□ -0.1
CHCHD3-201ENST00000262570 CD3EP07766 207 aa14.4□□□□□ -0.1
CHCHD3-201ENST00000262570 DBTP11182 482 aaKnown RBP14.4□□□□□ -0.1
CHCHD3-201ENST00000262570 CCL2P13500 99 aa14.4□□□□□ -0.1
CHCHD3-201ENST00000262570 CALCRP30988 508 aa14.4□□□□□ -0.1
CHCHD3-201ENST00000262570 APLNRP35414 380 aa14.4□□□□□ -0.1
CHCHD3-201ENST00000262570 ZNF91Q05481 1191 aa14.4□□□□□ -0.1
CHCHD3-201ENST00000262570 SPOCK1Q08629 439 aa14.4□□□□□ -0.1
CHCHD3-201ENST00000262570 EIF2B1Q14232 305 aaKnown RBP14.4□□□□□ -0.1
CHCHD3-201ENST00000262570 TBC1D28Q2M2D7 210 aa14.4□□□□□ -0.1
CHCHD3-201ENST00000262570 LAIR2Q6ISS4 152 aa14.4□□□□□ -0.1
CHCHD3-201ENST00000262570 RHOUQ7L0Q8 258 aa14.4□□□□□ -0.1
CHCHD3-201ENST00000262570 PIAS4Q8N2W9 510 aaPredicted RBP14.4□□□□□ -0.1
CHCHD3-201ENST00000262570 MARVELD3Q96A59 401 aa14.4□□□□□ -0.1
CHCHD3-201ENST00000262570 RNFT2Q96EX2 444 aa14.4□□□□□ -0.1
CHCHD3-201ENST00000262570 RADILQ96JH8 1075 aa14.4□□□□□ -0.1
CHCHD3-201ENST00000262570 AMELYQ99218 206 aa14.4□□□□□ -0.1
CHCHD3-201ENST00000262570 MRPS18AQ9NVS2 196 aaKnown RBP14.4□□□□□ -0.1
CHCHD3-201ENST00000262570 RPL36Q9Y3U8 105 aaKnown RBP14.4□□□□□ -0.1
CHCHD3-201ENST00000262570 RNF115Q9Y4L5 304 aa14.4□□□□□ -0.1
CHCHD3-201ENST00000262570 APOL3O95236 402 aa14.39□□□□□ -0.11
CHCHD3-201ENST00000262570 LYNP07948 512 aa14.39□□□□□ -0.11
CHCHD3-201ENST00000262570 ATP6V1E1P36543 226 aa14.39□□□□□ -0.11
CHCHD3-201ENST00000262570 HTR5AP47898 357 aa14.39□□□□□ -0.11
CHCHD3-201ENST00000262570 ECH1Q13011 328 aa14.39□□□□□ -0.11
CHCHD3-201ENST00000262570 RSPO1Q2MKA7 263 aaPredicted RBP14.39□□□□□ -0.11
CHCHD3-201ENST00000262570 ZNF787Q6DD87 383 aa14.39□□□□□ -0.11
CHCHD3-201ENST00000262570 SLC35F2Q8IXU6 374 aa14.39□□□□□ -0.11
CHCHD3-201ENST00000262570 PAQR4Q8N4S7 273 aaPredicted RBP14.39□□□□□ -0.11
CHCHD3-201ENST00000262570 OR4F15Q8NGB8 312 aa14.39□□□□□ -0.11
CHCHD3-201ENST00000262570 OR1J2Q8NGS2 313 aa14.39□□□□□ -0.11
CHCHD3-201ENST00000262570 THEM6Q8WUY1 208 aa14.39□□□□□ -0.11
CHCHD3-201ENST00000262570 RNF133Q8WVZ7 376 aa14.39□□□□□ -0.11
CHCHD3-201ENST00000262570 SLAMF6Q96DU3 332 aa14.39□□□□□ -0.11
CHCHD3-201ENST00000262570 MNTQ99583 582 aa14.39□□□□□ -0.11
CHCHD3-201ENST00000262570 COQ7Q99807 217 aa14.39□□□□□ -0.11
CHCHD3-201ENST00000262570 ATF6BQ99941 703 aa14.39□□□□□ -0.11
CHCHD3-201ENST00000262570 DDX28Q9NUL7 540 aaKnown RBP14.39□□□□□ -0.11
CHCHD3-201ENST00000262570 LAMP5Q9UJQ1 280 aa14.39□□□□□ -0.11
CHCHD3-201ENST00000262570 COPS3Q9UNS2 423 aa14.39□□□□□ -0.11
CHCHD3-201ENST00000262570 EXOGQ9Y2C4 368 aaKnown RBP14.39□□□□□ -0.11
CHCHD3-201ENST00000262570 KLHDC2Q9Y2U9 406 aa14.39□□□□□ -0.11
CHCHD3-201ENST00000262570 TMEM14AQ9Y6G1 99 aa14.39□□□□□ -0.11
CHCHD3-201ENST00000262570 A0A1W2PPR1 153 aa14.39□□□□□ -0.11
CHCHD3-201ENST00000262570 C5orf49A4QMS7 147 aa14.39□□□□□ -0.11
CHCHD3-201ENST00000262570 SHISA9B4DS77 424 aa14.39□□□□□ -0.11
CHCHD3-201ENST00000262570 ATP6V1G2-DDX39BF2Z307 99 aa14.39□□□□□ -0.11
CHCHD3-201ENST00000262570 J3QRE1 110 aa14.39□□□□□ -0.11
CHCHD3-201ENST00000262570 PLAUP00749 431 aa14.39□□□□□ -0.11
CHCHD3-201ENST00000262570 GDI2P50395 445 aaKnown RBP14.39□□□□□ -0.11
CHCHD3-201ENST00000262570 ADAM5Q6NVV9 412 aa14.39□□□□□ -0.11
CHCHD3-201ENST00000262570 SLC22A25Q6T423 547 aa14.39□□□□□ -0.11
CHCHD3-201ENST00000262570 SLC7A6Q92536 515 aa14.39□□□□□ -0.11
CHCHD3-201ENST00000262570 LGALS12Q96DT0 336 aa14.39□□□□□ -0.11
CHCHD3-201ENST00000262570 KCNS3Q9BQ31 491 aa14.39□□□□□ -0.11
CHCHD3-201ENST00000262570 ROS1P08922 2347 aa14.38□□□□□ -0.11
CHCHD3-201ENST00000262570 HRNRQ86YZ3 2850 aaPredicted RBP14.38□□□□□ -0.11
CHCHD3-201ENST00000262570 ZNF878C9JN71 531 aa14.38□□□□□ -0.11
CHCHD3-201ENST00000262570 DBHP09172 617 aa14.38□□□□□ -0.11
CHCHD3-201ENST00000262570 OR2T7P0C7T2 308 aa14.38□□□□□ -0.11
CHCHD3-201ENST00000262570 CCNOP22674 350 aa14.38□□□□□ -0.11
CHCHD3-201ENST00000262570 SLC15A1P46059 708 aa14.38□□□□□ -0.11
CHCHD3-201ENST00000262570 TLE4Q04727 773 aa14.38□□□□□ -0.11
CHCHD3-201ENST00000262570 RAB40BQ12829 278 aa14.38□□□□□ -0.11
CHCHD3-201ENST00000262570 KRTAP27-1Q3LI81 207 aa14.38□□□□□ -0.11
CHCHD3-201ENST00000262570 ZNF704Q6ZNC4 412 aaPredicted RBP14.38□□□□□ -0.11
CHCHD3-201ENST00000262570 KBTBD8Q8NFY9 601 aa14.38□□□□□ -0.11
CHCHD3-201ENST00000262570 OR2T27Q8NH04 317 aa14.38□□□□□ -0.11
CHCHD3-201ENST00000262570 LILRB1Q8NHL6 650 aaPredicted RBP14.38□□□□□ -0.11
CHCHD3-201ENST00000262570 CDH20Q9HBT6 801 aa14.38□□□□□ -0.11
CHCHD3-201ENST00000262570 CENPMQ9NSP4 180 aa14.38□□□□□ -0.11
CHCHD3-201ENST00000262570 HEATR1Q9H583 2144 aaKnown RBP14.37□□□□□ -0.11
CHCHD3-201ENST00000262570 DENRO43583 198 aaKnown RBP14.37□□□□□ -0.11
CHCHD3-201ENST00000262570 ICMTO60725 284 aa14.37□□□□□ -0.11
CHCHD3-201ENST00000262570 SSTR2P30874 369 aa14.37□□□□□ -0.11
CHCHD3-201ENST00000262570 OTX1P32242 354 aaPredicted RBP14.37□□□□□ -0.11
CHCHD3-201ENST00000262570 OPRL1P41146 370 aa14.37□□□□□ -0.11
CHCHD3-201ENST00000262570 CXCR4P61073 352 aa14.37□□□□□ -0.11
CHCHD3-201ENST00000262570 HGFACQ04756 655 aa14.37□□□□□ -0.11
CHCHD3-201ENST00000262570 KLHL22Q53GT1 634 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms