RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 FAM46BQ96A09 425 aa12.79□□□□□ -0.36
PCDHB3-201ENST00000231130 FAM3DQ96BQ1 224 aa12.79□□□□□ -0.36
PCDHB3-201ENST00000231130 JSRP1Q96MG2 331 aaPredicted RBP12.79□□□□□ -0.36
PCDHB3-201ENST00000231130 SMOC1Q9H4F8 434 aa12.79□□□□□ -0.36
PCDHB3-201ENST00000231130 TBC1D3DA0A087WVF3 549 aa12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 TBC1D3IA0A087WXS9 549 aa12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 TMEM235A6NFC5 223 aa12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 TBC1D3LB9A6J9 549 aa12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 BRINP1O60477 761 aa12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 TBC1D3HP0C7X1 549 aa12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 CALCBP10092 127 aa12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 ADAM8P78325 824 aa12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 TMEM52BQ4KMG9 183 aa12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 TBC1D3CQ6IPX1 549 aa12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 REC114Q7Z4M0 266 aa12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 BIVMQ86UB2 503 aa12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 TBC1D3Q8IZP1 549 aaPredicted RBP12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 EID2Q8N6I1 236 aa12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 ACBD4Q8NC06 268 aa12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 TSACCQ96A04 125 aaPredicted RBP12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 CPNE4Q96A23 557 aaPredicted RBP12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 CCDC74AQ96AQ1 378 aa12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 AMELYQ99218 206 aa12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 SYT4Q9H2B2 425 aa12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 SPACA1Q9HBV2 294 aa12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 OBSL1O75147 1896 aa12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 IGKV1D-16P01601 117 aa12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 HEXBP07686 556 aa12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 ACAA2P42765 397 aaKnown RBP12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 GRK6P43250 576 aa12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 C14orf28Q4W4Y0 310 aa12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 DHRS11Q6UWP2 260 aa12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 BPIFB2Q8N4F0 458 aa12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 METTL27Q8N6F8 245 aaPredicted RBP12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 OR4C3Q8NH37 302 aa12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 PATE1Q8WXA2 126 aa12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 KXD1Q9BQD3 176 aa12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 OCSTAMPQ9BR26 566 aa12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 TRIM2Q9C040 744 aa12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 FGF22Q9HCT0 170 aa12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 CBY1Q9Y3M2 126 aa12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 SPAG17Q6Q759 2223 aa12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 H0Y8X5 98 aa12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 RCC1P18754 421 aaPredicted RBP12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 AGAP20933 346 aa12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 DRD3P35462 400 aa12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 MAP3K8P41279 467 aa12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 GSK3AP49840 483 aa12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 ENPP2Q13822 863 aa12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 NR0B2Q15466 257 aa12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 ULK3Q6PHR2 472 aa12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 MOGAT1Q96PD6 335 aa12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 SLC6A7Q99884 636 aa12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 POTEKPQ9BYX7 375 aa12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 SEMA6CQ9H3T2 930 aa12.78□□□□□ -0.36
PCDHB3-201ENST00000231130 LRP3O75074 770 aa12.77□□□□□ -0.36
PCDHB3-201ENST00000231130 RDH16O75452 317 aa12.77□□□□□ -0.36
PCDHB3-201ENST00000231130 GLCEO94923 617 aa12.77□□□□□ -0.36
PCDHB3-201ENST00000231130 CYB5AP00167 134 aa12.77□□□□□ -0.36
PCDHB3-201ENST00000231130 CEACAM5P06731 702 aa12.77□□□□□ -0.36
PCDHB3-201ENST00000231130 EDN3P14138 238 aa12.77□□□□□ -0.36
PCDHB3-201ENST00000231130 IL13RA1P78552 427 aa12.77□□□□□ -0.36
PCDHB3-201ENST00000231130 SPOCK1Q08629 439 aa12.77□□□□□ -0.36
PCDHB3-201ENST00000231130 ZNF813Q6ZN06 617 aa12.77□□□□□ -0.36
PCDHB3-201ENST00000231130 SFTPA2Q8IWL1 248 aa12.77□□□□□ -0.36
PCDHB3-201ENST00000231130 OR5M8Q8NGP6 311 aa12.77□□□□□ -0.36
PCDHB3-201ENST00000231130 KIRREL1Q96J84 757 aa12.77□□□□□ -0.36
PCDHB3-201ENST00000231130 DNAJB12Q9NXW2 375 aaKnown RBP12.77□□□□□ -0.36
PCDHB3-201ENST00000231130 TAS2R8Q9NYW2 309 aa12.77□□□□□ -0.36
PCDHB3-201ENST00000231130 KCNG2Q9UJ96 466 aa12.77□□□□□ -0.36
PCDHB3-201ENST00000231130 ZNF749O43361 778 aa12.77□□□□□ -0.37
PCDHB3-201ENST00000231130 HPGDP15428 266 aa12.77□□□□□ -0.37
PCDHB3-201ENST00000231130 CXADRP78310 365 aa12.77□□□□□ -0.37
PCDHB3-201ENST00000231130 OR8G1Q15617 311 aa12.77□□□□□ -0.37
PCDHB3-201ENST00000231130 GLYATL3Q5SZD4 288 aa12.77□□□□□ -0.37
PCDHB3-201ENST00000231130 CNKSR3Q6P9H4 555 aa12.77□□□□□ -0.37
PCDHB3-201ENST00000231130 HIST2H3AQ71DI3 136 aa12.77□□□□□ -0.37
PCDHB3-201ENST00000231130 GPR148Q8TDV2 347 aa12.77□□□□□ -0.37
PCDHB3-201ENST00000231130 NRSN2Q9GZP1 204 aa12.77□□□□□ -0.37
PCDHB3-201ENST00000231130 RAB33BQ9H082 229 aa12.77□□□□□ -0.37
PCDHB3-201ENST00000231130 SERTAD3Q9UJW9 196 aa12.77□□□□□ -0.37
PCDHB3-201ENST00000231130 SPACA6W5XKT8 324 aa12.77□□□□□ -0.37
PCDHB3-201ENST00000231130 A0A1W2PQU0 124 aa12.77□□□□□ -0.37
PCDHB3-201ENST00000231130 C9JQL5 133 aa12.77□□□□□ -0.37
PCDHB3-201ENST00000231130 THEGLP0DJG4 465 aa12.77□□□□□ -0.37
PCDHB3-201ENST00000231130 PPM1AP35813 382 aa12.77□□□□□ -0.37
PCDHB3-201ENST00000231130 ZNF616Q08AN1 781 aa12.77□□□□□ -0.37
PCDHB3-201ENST00000231130 EBPQ15125 230 aaKnown RBP12.77□□□□□ -0.37
PCDHB3-201ENST00000231130 ZNHIT3Q15649 155 aaPredicted RBP12.77□□□□□ -0.37
PCDHB3-201ENST00000231130 SLC22A6Q4U2R8 563 aa12.77□□□□□ -0.37
PCDHB3-201ENST00000231130 TMEM31Q5JXX7 168 aa12.77□□□□□ -0.37
PCDHB3-201ENST00000231130 FCRL6Q6DN72 434 aa12.77□□□□□ -0.37
PCDHB3-201ENST00000231130 SLC39A5Q6ZMH5 540 aa12.77□□□□□ -0.37
PCDHB3-201ENST00000231130 MDGA2Q7Z553 956 aa12.77□□□□□ -0.37
PCDHB3-201ENST00000231130 FAM174AQ8TBP5 190 aa12.77□□□□□ -0.37
PCDHB3-201ENST00000231130 RERGQ96A58 199 aaPredicted RBP12.77□□□□□ -0.37
PCDHB3-201ENST00000231130 CMBLQ96DG6 245 aa12.77□□□□□ -0.37
PCDHB3-201ENST00000231130 RAB11FIP5Q9BXF6 653 aa12.77□□□□□ -0.37
PCDHB3-201ENST00000231130 DUSP22Q9NRW4 184 aa12.77□□□□□ -0.37
PCDHB3-201ENST00000231130 PRR13Q9NZ81 148 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms