RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 ASAH2BP0C7U1 165 aa18.45■□□□□ 0.54
SNX3-201ENST00000230085 POU3F4P49335 361 aa18.45■□□□□ 0.54
SNX3-201ENST00000230085 CENPAP49450 140 aa18.45■□□□□ 0.54
SNX3-201ENST00000230085 RAB11BQ15907 218 aa18.45■□□□□ 0.54
SNX3-201ENST00000230085 EEF1A1P5Q5VTE0 462 aa18.45■□□□□ 0.54
SNX3-201ENST00000230085 LRRC46Q96FV0 321 aa18.45■□□□□ 0.54
SNX3-201ENST00000230085 NKX6-2Q9C056 277 aaPredicted RBP18.45■□□□□ 0.54
SNX3-201ENST00000230085 ERVK-19Q9WJR5 959 aa18.45■□□□□ 0.54
SNX3-201ENST00000230085 MRPS2Q9Y399 296 aaKnown RBP18.45■□□□□ 0.54
SNX3-201ENST00000230085 SPDEFO95238 335 aa18.44■□□□□ 0.54
SNX3-201ENST00000230085 RORAP35398 523 aa18.44■□□□□ 0.54
SNX3-201ENST00000230085 HOXA1P49639 335 aaPredicted RBP18.44■□□□□ 0.54
SNX3-201ENST00000230085 CAPZA1P52907 286 aa18.44■□□□□ 0.54
SNX3-201ENST00000230085 MC2RQ01718 297 aa18.44■□□□□ 0.54
SNX3-201ENST00000230085 PLA2G7Q13093 441 aa18.44■□□□□ 0.54
SNX3-201ENST00000230085 C4orf46Q504U0 113 aa18.44■□□□□ 0.54
SNX3-201ENST00000230085 C10orf91Q5T1B1 145 aa18.44■□□□□ 0.54
SNX3-201ENST00000230085 TMEM205Q6UW68 189 aa18.44■□□□□ 0.54
SNX3-201ENST00000230085 BIVMQ86UB2 503 aa18.44■□□□□ 0.54
SNX3-201ENST00000230085 ZNF511Q8NB15 262 aa18.44■□□□□ 0.54
SNX3-201ENST00000230085 SLC25A28Q96A46 364 aa18.44■□□□□ 0.54
SNX3-201ENST00000230085 FAM3DQ96BQ1 224 aa18.44■□□□□ 0.54
SNX3-201ENST00000230085 ZNF501Q96CX3 271 aaPredicted RBP18.44■□□□□ 0.54
SNX3-201ENST00000230085 TMEM138Q9NPI0 162 aa18.44■□□□□ 0.54
SNX3-201ENST00000230085 SLC39A1Q9NY26 324 aa18.44■□□□□ 0.54
SNX3-201ENST00000230085 TMEM150CB9EJG8 249 aa18.43■□□□□ 0.54
SNX3-201ENST00000230085 RDH16O75452 317 aa18.43■□□□□ 0.54
SNX3-201ENST00000230085 CD3DP04234 171 aa18.43■□□□□ 0.54
SNX3-201ENST00000230085 GABREP78334 506 aa18.43■□□□□ 0.54
SNX3-201ENST00000230085 ACY1Q03154 408 aa18.43■□□□□ 0.54
SNX3-201ENST00000230085 FAM53BQ14153 422 aa18.43■□□□□ 0.54
SNX3-201ENST00000230085 PAN3Q58A45 887 aaKnown RBP18.43■□□□□ 0.54
SNX3-201ENST00000230085 FNDC7Q5VTL7 733 aa18.43■□□□□ 0.54
SNX3-201ENST00000230085 WBP2NLQ6ICG8 309 aa18.43■□□□□ 0.54
SNX3-201ENST00000230085 FAHD2BQ6P2I3 314 aaPredicted RBP18.43■□□□□ 0.54
SNX3-201ENST00000230085 C11orf88Q6PI97 169 aa18.43■□□□□ 0.54
SNX3-201ENST00000230085 ACOT7LQ6ZUV0 252 aa18.43■□□□□ 0.54
SNX3-201ENST00000230085 ATG4DQ86TL0 474 aaPredicted RBP18.43■□□□□ 0.54
SNX3-201ENST00000230085 ARMC10Q8N2F6 343 aa18.43■□□□□ 0.54
SNX3-201ENST00000230085 C7orf57Q8NEG2 295 aa18.43■□□□□ 0.54
SNX3-201ENST00000230085 ASB17Q8WXJ9 295 aa18.43■□□□□ 0.54
SNX3-201ENST00000230085 SEH1LQ96EE3 360 aa18.43■□□□□ 0.54
SNX3-201ENST00000230085 FAHD2AQ96GK7 314 aa18.43■□□□□ 0.54
SNX3-201ENST00000230085 Q9N2J8 555 aa18.43■□□□□ 0.54
SNX3-201ENST00000230085 LAMP5Q9UJQ1 280 aa18.43■□□□□ 0.54
SNX3-201ENST00000230085 AKAP13Q12802 2813 aa18.43■□□□□ 0.54
SNX3-201ENST00000230085 KANTRA0A1W2PQU2 76 aa18.42■□□□□ 0.54
SNX3-201ENST00000230085 OR5H14A6NHG9 310 aa18.42■□□□□ 0.54
SNX3-201ENST00000230085 B4E171 279 aa18.42■□□□□ 0.54
SNX3-201ENST00000230085 CSTAP01040 98 aa18.42■□□□□ 0.54
SNX3-201ENST00000230085 IL2RAP01589 272 aa18.42■□□□□ 0.54
SNX3-201ENST00000230085 ZNF735P0CB33 412 aa18.42■□□□□ 0.54
SNX3-201ENST00000230085 TSPAN7P41732 249 aa18.42■□□□□ 0.54
SNX3-201ENST00000230085 SOX2P48431 317 aa18.42■□□□□ 0.54
SNX3-201ENST00000230085 EFNB2P52799 333 aa18.42■□□□□ 0.54
SNX3-201ENST00000230085 OC90Q02509 493 aaPredicted RBP18.42■□□□□ 0.54
SNX3-201ENST00000230085 TEX30Q5JUR7 227 aa18.42■□□□□ 0.54
SNX3-201ENST00000230085 C11orf87Q6NUJ2 197 aa18.42■□□□□ 0.54
SNX3-201ENST00000230085 BEST3Q8N1M1 668 aa18.42■□□□□ 0.54
SNX3-201ENST00000230085 PRSS35Q8N3Z0 413 aa18.42■□□□□ 0.54
SNX3-201ENST00000230085 ZNF676Q8N7Q3 588 aa18.42■□□□□ 0.54
SNX3-201ENST00000230085 ZNF614Q8N883 585 aa18.42■□□□□ 0.54
SNX3-201ENST00000230085 FAM117AQ9C073 453 aa18.42■□□□□ 0.54
SNX3-201ENST00000230085 POFUT1Q9H488 388 aa18.42■□□□□ 0.54
SNX3-201ENST00000230085 MMP25Q9NPA2 562 aa18.42■□□□□ 0.54
SNX3-201ENST00000230085 CACNA1AO00555 2505 aa18.42■□□□□ 0.54
SNX3-201ENST00000230085 TRAV18A0A075B6X5 111 aa18.42■□□□□ 0.54
SNX3-201ENST00000230085 SYNDIG1LA6NDD5 238 aa18.42■□□□□ 0.54
SNX3-201ENST00000230085 LDLRAD4O15165 306 aa18.42■□□□□ 0.54
SNX3-201ENST00000230085 FGF16O43320 207 aa18.42■□□□□ 0.54
SNX3-201ENST00000230085 ATG12O94817 140 aa18.42■□□□□ 0.54
SNX3-201ENST00000230085 RPP14O95059 124 aaKnown RBP18.42■□□□□ 0.54
SNX3-201ENST00000230085 TNFSF15O95150 251 aa18.42■□□□□ 0.54
SNX3-201ENST00000230085 ITGA5P08648 1049 aa18.42■□□□□ 0.54
SNX3-201ENST00000230085 KIR3DL2P43630 455 aa18.42■□□□□ 0.54
SNX3-201ENST00000230085 C2orf76Q3KRA6 126 aa18.42■□□□□ 0.54
SNX3-201ENST00000230085 KLHL26Q53HC5 615 aa18.42■□□□□ 0.54
SNX3-201ENST00000230085 ALG10Q5BKT4 473 aa18.42■□□□□ 0.54
SNX3-201ENST00000230085 PRAMEF17Q5VTA0 474 aa18.42■□□□□ 0.54
SNX3-201ENST00000230085 NPSR1Q6W5P4 371 aa18.42■□□□□ 0.54
SNX3-201ENST00000230085 ARHGEF39Q8N4T4 335 aa18.42■□□□□ 0.54
SNX3-201ENST00000230085 OR51D1Q8NGF3 324 aa18.42■□□□□ 0.54
SNX3-201ENST00000230085 OR1L3Q8NH93 324 aa18.42■□□□□ 0.54
SNX3-201ENST00000230085 STOML3Q8TAV4 291 aa18.42■□□□□ 0.54
SNX3-201ENST00000230085 DUSP19Q8WTR2 217 aa18.42■□□□□ 0.54
SNX3-201ENST00000230085 FKRPQ9H9S5 495 aa18.42■□□□□ 0.54
SNX3-201ENST00000230085 STARD5Q9NSY2 213 aa18.42■□□□□ 0.54
SNX3-201ENST00000230085 B3GALT1Q9Y5Z6 326 aa18.42■□□□□ 0.54
SNX3-201ENST00000230085 A0A087WV48 116 aa18.41■□□□□ 0.54
SNX3-201ENST00000230085 ZNF860A6NHJ4 632 aa18.41■□□□□ 0.54
SNX3-201ENST00000230085 TIAF1O95411 115 aa18.41■□□□□ 0.54
SNX3-201ENST00000230085 RAB3DO95716 219 aa18.41■□□□□ 0.54
SNX3-201ENST00000230085 MAS1P04201 325 aa18.41■□□□□ 0.54
SNX3-201ENST00000230085 S100A12P80511 92 aa18.41■□□□□ 0.54
SNX3-201ENST00000230085 ROM1Q03395 351 aa18.41■□□□□ 0.54
SNX3-201ENST00000230085 IL11RAQ14626 422 aa18.41■□□□□ 0.54
SNX3-201ENST00000230085 MICBQ29980 383 aa18.41■□□□□ 0.54
SNX3-201ENST00000230085 DGAT2L6Q6ZPD8 337 aa18.41■□□□□ 0.54
SNX3-201ENST00000230085 PRSS41Q7RTY9 318 aa18.41■□□□□ 0.54
SNX3-201ENST00000230085 PPP1R3BQ86XI6 285 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms